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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:functional gastric disease
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Accession:DOID:1159 term browser browse the term
Synonyms:primary_id: RDO:9003446
 xref: ICD9CM:536.8
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
 
Diabetic Gastroparesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nos3 nitric oxide synthase 3 IEP mRNA:decreased expression:pyloric antrum (rat) RGD PMID:29071981 RGD:13446417 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
Dyspepsia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone IEP protein:increased expression:central nucleus of amygdala, paraventricular hypothalamic nucleus (rat) RGD PMID:21589865 RGD:5490556 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Htr3a 5-hydroxytryptamine receptor 3A ISO DNA:SNP:promoter:c.-42C>T(human) RGD PMID:22014438 RGD:6480658 NCBI chr 8:49,242,018...49,254,475
Ensembl chr 8:49,242,020...49,254,389
JBrowse link
G Ifng interferon gamma treatment IEP RGD PMID:28854971 RGD:14975120 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Il10 interleukin 10 no_association ISO DNA:SNP:promoter:-819C>A (rs1800871)(human)
DNA:SNP:promoter:-1082G>A (rs1800896)(human)
RGD PMID:28965252 PMID:28965252 RGD:14975154, RGD:14975154 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Slc6a4 solute carrier family 6 member 4 susceptibility ISO DNA:polymorphism: :
DNA:haplotypes, multiple:
RGD PMID:22014438 PMID:24720453 RGD:6480658, RGD:36947385 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
JBrowse link
gastroparesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO CTD Direct Evidence: therapeutic CTD PMID:20378827 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18109
    disease of anatomical entity 17480
      gastrointestinal system disease 6530
        stomach disease 1006
          functional gastric disease 7
            Dyspepsia 5
            gastroparesis + 2
            postgastrectomy syndrome + 0
Path 2
Term Annotations click to browse term
  disease 18109
    disease of anatomical entity 17480
      gastrointestinal system disease 6530
        Gastrointestinal Diseases 4665
          stomach disease 1006
            functional gastric disease 7
              Dyspepsia 5
              gastroparesis + 2
              postgastrectomy syndrome + 0
paths to the root