RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: osteoporosis
Accession: DOID:11476
browse the term
Definition: A bone resorption disease characterized by decreased density of normally mineralized bone which results_in the thinning of bone tissue and decreased mechanical strength. (DO)
Synonyms: exact_synonym: Osteoporoses; age related osteoporosis; age-related bone loss; age-related bone losses; age-related osteoporoses; involutional osteoporosis; post-traumatic osteoporoses; post-traumatic osteoporosis; senile osteoporoses; senile osteoporosis
narrow_synonym: CALCR-RELATED CONDITION; LRP5-RELATED PRIMARY OSTEOPOROSIS; X-linked osteoporosis with fractures
broad_synonym: WNT1-RELATED CONDITION
related_synonym: OSTEOPOROSIS, EARLY-ONSET, SUSCEPTIBILITY TO; OSTEOPOROSIS, SUSCEPTIBILITY TO; fracture, hip, susceptibility to
xref: EFO:0003882 ; ICD10CM:M81.0 ; ICD9CM:733.0 ; MESH:D010024 ; MIM:166710 ; MONDO:0005298 ; NCI:C3298
For additional species annotation, visit the
Alliance of Genome Resources .
GViewer not supported for the selected species.
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ABL1
ABL proto-oncogene 1, non-receptor tyrosine kinase
ISO
RGD
PMID:10700189
RGD:10047094
NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734
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ACTG1
actin gamma 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr16:73,456,907...73,459,777
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ADCY5
adenylate cyclase 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18029912
NCBI chr22:57,427,711...57,589,440
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AGER
advanced glycosylation end-product specific receptor
ISO
mRNA:increased expression:proximal end of left femur (rat)
RGD
PMID:21542009 PMID:22036861
RGD:6767561 RGD:7245948
NCBI chr17:39,847,343...39,851,288
Ensembl chr17:39,847,759...39,851,127
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ANTXR2
ANTXR cell adhesion molecule 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:12973667
NCBI chr 7:28,345,849...28,499,818
Ensembl chr 7:28,375,899...28,499,522
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ANXA2
annexin A2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr26:23,100,000...23,147,687
Ensembl chr26:23,099,992...23,145,457
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AR
androgen receptor
treatment
ISO
RGD
PMID:14600402 PMID:18847323
RGD:10043196 RGD:10043198
NCBI chr X:57,380,587...57,553,613
Ensembl chr X:57,380,611...57,546,776
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ATIC
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr10:101,128,583...101,166,668
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ATM
ATM serine/threonine kinase
ISO
RGD
PMID:16644862
RGD:10047420
NCBI chr 1:99,653,208...99,786,889
Ensembl chr 1:99,653,139...99,791,520
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ATP4B
ATPase H+/K+ transporting subunit beta
treatment
ISO
RGD
PMID:26869358
RGD:14696735
NCBI chr 3:91,618,147...91,629,177
Ensembl chr 3:91,618,957...91,627,679
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BAX
BCL2 associated X, apoptosis regulator
treatment
ISO
RGD
PMID:22648569
RGD:10054093
NCBI chr 6:42,186,028...42,193,105
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BCL2
BCL2 apoptosis regulator
treatment
ISO
RGD
PMID:22648569
RGD:10054093
NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895
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BGLAP
bone gamma-carboxyglutamate protein
susceptibility treatment
ISO
DNA:SNP, haplotype:promoter:g.-298C>T (human) associated with alcohol use disorder associated with Diabetes Mellitus, type 2;associated with Diabetes Mellitus, type 2; protein:uncercarboxylated:serum
RGD
PMID:15108065 PMID:21550389 PMID:23137636 PMID:29698972
RGD:10045665 RGD:598092493 RGD:6483552 RGD:6483579
NCBI chr20:7,623,716...7,626,353
Ensembl chr20:7,623,883...7,624,812
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BMP2
bone morphogenetic protein 2
treatment
ISO
associated with alcohol use disorder
RGD
PMID:17002564 PMID:29698972
RGD:1625350 RGD:598092493
NCBI chr 2:31,349,394...31,361,227
Ensembl chr 2:31,348,808...31,360,901
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BMP4
bone morphogenetic protein 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:36453845
NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225
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CA2
carbonic anhydrase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 8:80,830,963...80,848,245
Ensembl chr 8:80,830,939...80,848,707
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CALCR
calcitonin receptor
susceptibility
ISO
ClinVar Annotator: match by term: CALCR-related condition
OMIM ClinVar
PMID:9003491 PMID:9571205 PMID:9817931 PMID:25741868 PMID:28492532
NCBI chr21:55,433,438...55,585,608
Ensembl chr21:55,523,412...55,583,735
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CAP1
cyclase associated actin cytoskeleton regulatory protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr20:92,833,112...92,865,258
Ensembl chr20:92,829,735...92,864,697
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CCT2
chaperonin containing TCP1 subunit 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr11:65,213,992...65,230,318
Ensembl chr11:65,214,060...65,230,379
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CIITA
class II major histocompatibility complex transactivator
ISO
OMIM:166710
MouseDO
NCBI chr 5:10,341,690...10,401,988
Ensembl chr 5:10,372,344...10,400,451
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CLEC11A
C-type lectin domain containing 11A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:27976999
NCBI chr 6:43,780,151...43,782,780
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COL1A1
collagen type I alpha 1 chain
susceptibility
ISO
ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL | ClinVar Annotator: match by term: Osteoporosis ClinVar Annotator: match by term: Bone mineral density quantitative trait locus 18 | ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL DNA:SNP, haplotype:intron:g.2046G>T (human)
OMIM ClinVar RGD
PMID:1770532 PMID:2037280 PMID:2542316 PMID:2794057 PMID:2894346 PMID:7691343 PMID:7695699 PMID:7881420 PMID:7942841 PMID:8100856 PMID:8218237 PMID:8408653 PMID:8456808 PMID:8613526 PMID:8669434 PMID:8808594 PMID:8841196 PMID:9016532 PMID:9067755 PMID:9101304 PMID:9295084 PMID:9443882 PMID:9535665 PMID:9536098 PMID:10739762 PMID:10931857 PMID:11113887 PMID:11204438 PMID:11317364 PMID:12362985 PMID:12590186 PMID:15024692 PMID:15024745 PMID:15241796 PMID:15741671 PMID:15864348 PMID:15931785 PMID:16199547 PMID:16786509 PMID:17078022 PMID:17211858 PMID:17309652 PMID:17392686 PMID:17576681 PMID:18272325 PMID:18412368 PMID:18553566 PMID:18670065 PMID:18704262 PMID:18798308 PMID:18996919 PMID:19344236 PMID:19358256 PMID:19491628 PMID:19637253 PMID:20981092 PMID:21249479 PMID:21567126 PMID:21594610 PMID:21667357 PMID:22206639 PMID:22589248 PMID:22753364 PMID:22855962 PMID:23137636 PMID:23265383 PMID:23587214 PMID:23692737 PMID:24147872 PMID:24390061 PMID:24486247 PMID:24668929 PMID:24767406 PMID:25086671 PMID:25436829 PMID:25597651 PMID:25741868 PMID:25944380 PMID:25963598 PMID:26177859 PMID:26467025 PMID:26627451 PMID:27044453 PMID:27132807 PMID:27146342 PMID:27484908 PMID:27509835 PMID:27510842 PMID:27519266 PMID:27748872 PMID:28102596 PMID:28378289 PMID:28492532 PMID:28725987 PMID:28810924 PMID:29150909 PMID:29499418 PMID:29595812 PMID:29807018 PMID:30614853 PMID:30692697 PMID:30715774 PMID:31304589 PMID:31447884 PMID:32166892 PMID:33228694 PMID:33470886 PMID:33928192 PMID:33939306 PMID:34902613 PMID:35909573 PMID:36709916 More...
RGD:10045665
NCBI chr16:43,134,648...43,152,313
Ensembl chr16:43,134,779...43,150,930
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COL1A2
collagen type I alpha 2 chain
ISO
ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL | ClinVar Annotator: match by term: Osteoporosis
OMIM ClinVar
PMID:1978725 PMID:2010058 PMID:2985635 PMID:7695699 PMID:7860070 PMID:8094076 PMID:8218237 PMID:9016532 PMID:9133348 PMID:9272740 PMID:9399846 PMID:9594376 PMID:9923651 PMID:11007540 PMID:11288717 PMID:12362985 PMID:15077201 PMID:15172002 PMID:15241796 PMID:16199547 PMID:16705691 PMID:16786509 PMID:16879195 PMID:17078022 PMID:17206620 PMID:17211858 PMID:18028452 PMID:18311573 PMID:19344236 PMID:20301472 PMID:21520333 PMID:21667357 PMID:22589248 PMID:22753364 PMID:24342908 PMID:24501682 PMID:25086671 PMID:25326637 PMID:25436829 PMID:25450603 PMID:25741868 PMID:25944380 PMID:26177859 PMID:26264438 PMID:26307460 PMID:26371943 PMID:26402641 PMID:26432670 PMID:26467025 PMID:26604951 PMID:27509835 PMID:27510842 PMID:27519266 PMID:28017821 PMID:28378289 PMID:28492532 PMID:28518168 PMID:29150909 PMID:30715774 PMID:30821104 PMID:31218159 PMID:32166892 PMID:32461654 PMID:32659730 PMID:32667677 PMID:33939306 PMID:34091789 PMID:35052464 PMID:36951356 PMID:37895885 More...
NCBI chr21:54,602,780...54,639,832
Ensembl chr21:54,602,398...54,632,780
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CTSK
cathepsin K
ISO
RGD
PMID:10469835
RGD:734856
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CXCR4
C-X-C motif chemokine receptor 4
ISO
RGD
PMID:29882473
RGD:14700776
NCBI chr10:20,336,470...20,340,308
Ensembl chr10:20,336,247...20,340,309
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CYP17A1
cytochrome P450 family 17 subfamily A member 1
ISO
DNA:snps:multiple (human)
RGD
PMID:17002564
RGD:1625350
NCBI chr 9:95,870,098...95,877,345
Ensembl chr 9:95,866,908...95,877,180
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CYP19A1
cytochrome P450 family 19 subfamily A member 1
ISO
CTD Direct Evidence: marker/mechanism DNA:snps:multiple (human)
CTD RGD
PMID:17002564 PMID:20723554
RGD:1625350
NCBI chr26:32,074,260...32,164,926
Ensembl chr26:32,132,425...32,164,277
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CYP24A1
cytochrome P450 family 24 subfamily A member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:22337913
NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884
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DAAM2
dishevelled associated activator of morphogenesis 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:30598549
NCBI chr17:32,252,891...32,367,575
Ensembl chr17:32,255,661...32,301,176
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DBP
D-box binding PAR bZIP transcription factor
ISO
RGD
PMID:17002564
RGD:1625350
NCBI chr 6:41,882,042...41,889,311
Ensembl chr 6:41,882,317...41,889,200
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DSPP
dentin sialophosphoprotein
ISO
protein:decreased expression:incisor dental pulp (rat)
RGD
PMID:23974864
RGD:12911019
NCBI chr 7:35,993,669...35,999,443
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ENO1
enolase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr20:122,884,846...122,902,669
Ensembl chr20:122,884,727...122,903,372
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ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit
ISO
RGD
PMID:23281008
RGD:10045609
NCBI chr 6:38,857,067...38,900,177
Ensembl chr 6:38,854,803...38,872,967
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ESR1
estrogen receptor 1
no_association treatment
ISO
DNA:repeat:intron:IVS5+225(CA)18-25 (human) DNA:SNP:intron:397T>C (human) DNA:repeat:5' utr:g.-1174(TA)10-27 (human) DNA:SNP, haplotype:intron:g.938C>T (human) DNA:SNPs:intron: (rs2234693, rs9340799) (human) DNA:SNP:exon:2014G>A (human)
RGD
PMID:10773580 PMID:16530497 PMID:16955786 PMID:17896124 PMID:17953702 PMID:20116372 PMID:21421090 PMID:23137636 More...
RGD:10045665 RGD:10045825 RGD:10045826 RGD:10045828 RGD:10045834 RGD:10045839 RGD:10045841 RGD:8694129
NCBI chr13:79,153,418...79,554,552
Ensembl chr13:79,270,265...79,554,549
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ESR2
estrogen receptor 2
susceptibility treatment
ISO
DNA:SNP, haplotypes: :-1213T>C (human) DNA:repeat:3' utr: g.dupCA (human) DNA:SNP, haplotype:3'utr:*39A>G (human)
RGD
PMID:16530497 PMID:16777502 PMID:16955786 PMID:21421090 PMID:22948905
RGD:10045825 RGD:10045841 RGD:1626507 RGD:7364765 RGD:8694129
NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486
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ESRRA
estrogen related receptor alpha
ISO
RGD
PMID:19936213
RGD:10401868
NCBI chr 1:9,918,741...9,929,481
Ensembl chr 1:9,917,436...9,929,450
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FGA
fibrinogen alpha chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 7:101,127,554...101,134,881
Ensembl chr 7:101,125,791...101,134,405
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FGB
fibrinogen beta chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 7:101,106,468...101,114,566
Ensembl chr 7:101,106,483...101,114,662
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GAPDH
glyceraldehyde-3-phosphate dehydrogenase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr11:6,569,029...6,572,877
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GHR
growth hormone receptor
treatment
ISO
associated with Uremia;protein:altered expression:osteoblast, osteoclast, chondroblast associated with Cholestasis
RGD
PMID:17647196 PMID:19424739
RGD:10003128 RGD:10003131
NCBI chr 4:41,171,038...41,464,474
Ensembl chr 4:41,285,712...41,464,666
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GOLM1
golgi membrane protein 1
treatment
ISO
protein:increased expression:serum
RGD
PMID:30396165
RGD:401827113
NCBI chr12:96,706,865...96,778,687
Ensembl chr12:96,708,548...96,779,065
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GORAB
golgin, RAB6 interacting
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18997784
NCBI chr25:58,528,062...58,549,981
Ensembl chr25:58,527,947...58,549,891
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GPC6
glypican 6
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:28869591
NCBI chr 3:72,075,622...73,242,678
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GPD2
glycerol-3-phosphate dehydrogenase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr10:41,832,772...41,984,109
Ensembl chr10:41,834,013...41,986,423
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GPX1
glutathione peroxidase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr22:10,754,976...10,756,617
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GSN
gelsolin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr12:18,253,079...18,317,285
Ensembl chr12:18,253,324...18,285,938
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GSR
glutathione-disulfide reductase
ISO
protein:decreased expression:blood
RGD
PMID:19464221
RGD:10401828
NCBI chr 8:28,778,713...28,851,907
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GSTP1
glutathione S-transferase pi 1
ISO
associated with Cystic Fibrosis;DNA:missense mutation:cds:c.313A>G (p.I105V) (human)
RGD
PMID:24593045
RGD:10401929
NCBI chr 1:6,676,897...6,679,936
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HFE
homeostatic iron regulator
ISO
associated with hemochromatosis
RGD
PMID:26829642
RGD:14746963
NCBI chr17:46,159,770...46,168,831
Ensembl chr17:46,156,685...46,164,649
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ID4
inhibitor of DNA binding 4
ISO
OMIM:166710
MouseDO
NCBI chr17:52,349,908...52,353,218
Ensembl chr17:52,348,388...52,353,281
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IDH2
isocitrate dehydrogenase (NADP(+)) 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr29:8,633,429...8,650,744
Ensembl chr29:8,633,715...8,650,657
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IFITM5
interferon induced transmembrane protein 5
ISO
ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL
ClinVar
PMID:22863190 PMID:22863195 PMID:23977282 PMID:25251575 PMID:25741868 PMID:28492532 PMID:28725987 PMID:29174564 PMID:31099171 PMID:31159867 PMID:32383316 PMID:35216266 More...
NCBI chr 1:112,164...113,988
Ensembl chr 1:112,469...113,448
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IFNGR1
interferon gamma receptor 1
ISO
OMIM:166710
MouseDO
NCBI chr13:36,203,038...36,224,039
Ensembl chr13:36,203,004...36,222,542
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IGF1
insulin like growth factor 1
treatment
ISO
associated with Uremia;protein:altered expression:osteoblast, osteoclast, chondroblast associated with Cholestasis associated with Diabetes Mellitus, Experimental
RGD
PMID:1466160 PMID:10499542 PMID:17647196 PMID:19424739
RGD:10003127 RGD:10003128 RGD:10003131 RGD:10003132
NCBI chr11:97,624,498...97,708,730
Ensembl chr11:97,631,189...97,707,308
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IGF1R
insulin like growth factor 1 receptor
ISO
RGD
PMID:18079194
RGD:10045888
NCBI chr29:17,212,206...17,534,036
Ensembl chr29:17,459,404...17,526,930
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IGF2
insulin like growth factor 2
treatment
ISO
RGD
PMID:12162999
RGD:10402555
NCBI chr 1:1,937,414...1,951,238
Ensembl chr 1:1,936,830...1,945,388
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IGFBP3
insulin like growth factor binding protein 3
ISO
protein:decreased expression:serum
RGD
PMID:9284698
RGD:10402579
NCBI chr21:12,905,309...12,914,199
Ensembl chr21:12,905,280...12,914,205
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IL1A
interleukin 1 alpha
ISO
associated with Arthritis, Rheumatoid
RGD
PMID:10555884
RGD:6907107
NCBI chr14:15,789,710...15,801,938
Ensembl chr14:15,789,013...15,796,611
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IL1B
interleukin 1 beta
ISO
RGD
PMID:22997530
RGD:7204491
NCBI chr14:15,844,628...15,852,652
Ensembl chr14:15,844,672...15,850,729
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IL1RN
interleukin 1 receptor antagonist
treatment
ISO
human protein in a rat model
RGD
PMID:8182127
RGD:8551834
NCBI chr14:16,136,667...16,152,451
Ensembl chr14:16,146,333...16,151,326
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IL6
interleukin 6
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15995586
NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
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IL6R
interleukin 6 receptor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15995586
NCBI chr20:9,345,723...9,418,963
Ensembl chr20:9,361,152...9,396,610
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IRAK3
interleukin 1 receptor associated kinase 3
ISO
OMIM:166710
MouseDO
NCBI chr11:61,868,817...61,920,896
Ensembl chr11:61,869,173...61,920,406
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IRS1
insulin receptor substrate 1
ISO
mRNA, protein:decreased expression:multiple
RGD
PMID:22820932
RGD:7207063
NCBI chr10:112,748,283...112,812,368
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IRS2
insulin receptor substrate 2
ISO
associated with Diabetes Mellitus, Type 2; protein:decreased expression:liver,kidney, muscle:
RGD
PMID:22820932
RGD:7207063
NCBI chr 3:88,045,439...88,076,468
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KL
klotho
ISO
CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:9363890
RGD:10403047
NCBI chr 3:11,755,015...11,799,537
Ensembl chr 3:11,755,016...11,797,596
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LEP
leptin
treatment
ISO
associated with chronic obstructive pulmonary disease; protein:decreased expression:serum human protein in a rat model protein:increased expression:serum (rat)
RGD
PMID:11459801 PMID:12609558 PMID:21376149 PMID:24250662
RGD:10053572 RGD:10053615 RGD:10053630 RGD:5128771
NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220
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LEPR
leptin receptor
susceptibility
ISO
DNA:missense mutations:CDS:p.K109R, Q223R (human)
RGD
PMID:23460508
RGD:10411886
NCBI chr20:67,454,205...67,567,524
Ensembl chr20:67,454,334...67,524,229
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LOC103238262
tubulin alpha-1C chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr11:45,494,973...45,502,786
Ensembl chr11:45,494,919...45,503,300
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LOC103239768
calcitonin gene-related peptide 1
ISO
RGD
PMID:2502220
RGD:734677
NCBI chr 1:49,946,574...49,956,010
Ensembl chr 1:49,951,694...49,954,092
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LRP5
LDL receptor related protein 5
treatment
ISO
ClinVar Annotator: match by term: LRP5-related primary osteoporosis | ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL | ClinVar Annotator: match by term: Osteoporosis ClinVar Annotator: match by term: Bone mineral density quantitative trait locus 1 | ClinVar Annotator: match by term: LRP5-related primary osteoporosis | ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL | ClinVar Annotator: match by term: Osteoporosis
RGD ClinVar
PMID:9536098 PMID:11719191 PMID:11793484 PMID:12015390 PMID:12579474 PMID:14727154 PMID:15024691 PMID:15077203 PMID:15141052 PMID:15201508 PMID:15619672 PMID:15767861 PMID:15777745 PMID:15824851 PMID:15824861 PMID:15850991 PMID:16234968 PMID:16252235 PMID:16679074 PMID:17052975 PMID:17137849 PMID:17202888 PMID:17223614 PMID:17306638 PMID:17307038 PMID:17395706 PMID:17505772 PMID:17576681 PMID:18026682 PMID:18058054 PMID:18349089 PMID:18588671 PMID:18602879 PMID:19324841 PMID:21116122 PMID:21528003 PMID:21977807 PMID:22025579 PMID:22456437 PMID:22511589 PMID:22704852 PMID:23441120 PMID:24423337 PMID:24706814 PMID:24715757 PMID:25711638 PMID:25741868 PMID:25920554 PMID:26348019 PMID:26467025 PMID:28192794 PMID:28222408 PMID:28378289 PMID:28420620 PMID:28492532 PMID:28494495 PMID:29055141 PMID:29168297 PMID:29181528 PMID:30283887 PMID:30452590 PMID:31039433 PMID:33118644 PMID:33302760 PMID:33619830 PMID:33939331 PMID:34639175 PMID:34673960 PMID:34860240 PMID:35106624 PMID:35252483 PMID:35672425 More...
RGD:12793063 RGD:7240519
NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383
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LTF
lactotransferrin
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:16648989 PMID:16936800
NCBI chr22:7,867,332...7,896,403
Ensembl chr22:7,867,286...7,894,521
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LY6S
lymphocyte antigen 6 family member S
ISO
OMIM:166710
MouseDO
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MAPK14
mitogen-activated protein kinase 14
treatment
ISO
RGD
PMID:18442314
RGD:10045965
NCBI chr17:36,012,164...36,095,542
Ensembl chr17:36,014,454...36,095,138
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MGLL
monoglyceride lipase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr22:53,092,970...53,354,316
Ensembl chr22:53,218,672...53,354,448
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MMP9
matrix metallopeptidase 9
ISO
associated with osteoporosis; protein:increased expression:serum
RGD
PMID:19411568
RGD:5129553
NCBI chr 2:17,867,267...17,874,757
Ensembl chr 2:17,867,177...17,874,712
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MYC
MYC proto-oncogene, bHLH transcription factor
ISO
RGD
PMID:22704852
RGD:7240519
NCBI chr 8:122,282,989...122,288,392
Ensembl chr 8:122,282,630...122,288,384
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NOG
noggin
ISO
RGD
PMID:12975477
RGD:10414323
NCBI chr16:36,816,783...36,818,693
Ensembl chr16:36,817,476...36,818,174
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NRIP1
nuclear receptor interacting protein 1
ISO
DNA:silent mutation, haplotype:p.G75G (human)
RGD
PMID:16530497
RGD:10045825
NCBI chr 2:77,480,398...77,583,985
Ensembl chr 2:77,577,029...77,580,496
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OFD1
OFD1 centriole and centriolar satellite protein
ISO
ClinVar Annotator: match by term: Osteoporosis
ClinVar
PMID:28289185
NCBI chr X:12,222,396...12,256,802
Ensembl chr X:12,222,760...12,256,557
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OPA1
OPA1 mitochondrial dynamin like GTPase
ISO
ClinVar Annotator: match by term: Osteoporosis
ClinVar
PMID:25741868
NCBI chr15:87,679,656...87,778,767
Ensembl chr15:87,679,077...87,779,102
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OXCT1
3-oxoacid CoA-transferase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 4:40,477,983...40,620,971
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P4HB
prolyl 4-hydroxylase subunit beta
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr16:73,718,743...73,733,488
Ensembl chr16:73,718,656...73,733,892
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PARK7
Parkinsonism associated deglycase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr20:123,776,084...123,808,031
Ensembl chr20:123,776,297...123,798,434
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PCNA
proliferating cell nuclear antigen
ISO
protein:increased expression:osteoblast:
RGD
PMID:22550338
RGD:10045656
NCBI chr 2:32,936,600...32,953,635
Ensembl chr 2:32,948,196...32,953,991
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PDLIM4
PDZ and LIM domain 4
susceptibility
ISO
CTD Direct Evidence: marker/mechanism
OMIM CTD
NCBI chr23:35,087,966...35,102,703
Ensembl chr23:35,088,001...35,105,018
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PGGHG
protein-glucosylgalactosylhydroxylysine glucosidase
ISO
ClinVar Annotator: match by term: OSTEOPOROSIS, INVOLUTIONAL
ClinVar
PMID:22863190 PMID:22863195 PMID:23977282 PMID:25251575 PMID:25741868 PMID:28492532 PMID:28725987 PMID:29174564 PMID:31099171 PMID:31159867 PMID:32383316 PMID:35216266 More...
NCBI chr 1:102,388...109,337
Ensembl chr 1:102,136...108,370
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PGLS
6-phosphogluconolactonase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 6:15,997,865...16,006,137
Ensembl chr 6:15,997,806...16,006,805
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PKM
pyruvate kinase M1/2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr26:11,224,332...11,255,538
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PLEK
pleckstrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr14:38,689,387...38,769,090
Ensembl chr14:38,689,393...38,745,893
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PLS3
plastin 3
ISO
ClinVar Annotator: match by term: X-linked osteoporosis with fractures
ClinVar
PMID:24088043 PMID:25741868
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PNP
purine nucleoside phosphorylase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr29:20,992,892...21,001,400
Ensembl chr29:20,993,280...21,001,606
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POMC
proopiomelanocortin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:3017235 PMID:4367732 PMID:6143199 PMID:6254450 PMID:19153526
NCBI chr14:82,491,296...82,499,289
Ensembl chr14:82,494,323...82,499,447
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PRDX3
peroxiredoxin 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 9:111,957,865...111,968,514
Ensembl chr 9:111,955,952...111,968,475
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PSMA2
proteasome 20S subunit alpha 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr21:15,672,115...15,686,492
Ensembl chr21:15,672,106...15,687,177
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PSMA5
proteasome 20S subunit alpha 5
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr20:24,120,613...24,146,369
Ensembl chr20:24,120,562...24,148,736
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PTGER4
prostaglandin E receptor 4
treatment
ISO
RGD
PMID:16442794
RGD:10043381
NCBI chr 4:39,440,697...39,453,983
Ensembl chr 4:39,440,276...39,454,004
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PTH
parathyroid hormone
treatment
ISO
protein:decreased expression:serum (rat) CTD Direct Evidence: therapeutic
RGD CTD
PMID:15710971 PMID:17317460 PMID:17882678 PMID:19578808 PMID:21306167 PMID:22312238 PMID:23161222 PMID:30639440 More...
RGD:7242793 RGD:7242907
NCBI chr 1:51,327,555...51,330,810
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RAB7B
RAB7B, member RAS oncogene family
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr25:23,341,090...23,367,414
Ensembl chr25:23,341,490...23,367,398
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REN
renin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18847324
NCBI chr25:25,159,816...25,193,620
Ensembl chr25:25,183,037...25,193,420
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RSU1
Ras suppressor protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 9:16,539,230...16,768,526
Ensembl chr 9:16,535,573...16,768,593
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RUNX2
RUNX family transcription factor 2
treatment
ISO
associated with alcohol use disorder
RGD
PMID:29698972
RGD:598092493
NCBI chr17:26,679,386...26,807,812
Ensembl chr17:26,683,175...26,807,319
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RYR1
ryanodine receptor 1
ISO
ClinVar Annotator: match by term: Osteoporosis
ClinVar
PMID:25741868 PMID:28492532
NCBI chr 6:33,080,443...33,234,478
Ensembl chr 6:33,080,758...33,213,788
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SERPINF1
serpin family F member 1
ISO
ClinVar Annotator: match by term: Osteoporosis
ClinVar
PMID:25741868 PMID:28492532 PMID:29150909 PMID:30968248
NCBI chr16:1,408,453...1,424,197
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SIRT1
sirtuin 1
treatment
ISO
RGD
PMID:22555620 PMID:25377437
RGD:10047129 RGD:10053568
NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867
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SOD2
superoxide dismutase 2
no_association susceptibility
ISO
CTD Direct Evidence: marker/mechanism DNA:SNPs:5' utr, exon, intron:multiple DNA:SNPs:intron, exon:g.31A>G, g.327C>T (p.A16V) (rs5746094, rs4880) (human)
CTD RGD
PMID:18924182 PMID:26336112
RGD:11035299
NCBI chr13:87,284,537...87,297,998
Ensembl chr13:87,280,686...87,297,974
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TGFB1
transforming growth factor beta 1
treatment
ISO
associated with Uremia;protein:increased expression:osteoblast, osteoclast CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:12706579 PMID:17647196
RGD:10003128
NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
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TLN1
talin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr12:44,870,004...44,906,686
Ensembl chr12:44,876,643...44,907,072
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TNFRSF11A
TNF receptor superfamily member 11a
ISO
RGD
PMID:17002564
RGD:1625350
NCBI chr18:17,385,251...17,446,442
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TNFRSF11B
TNF receptor superfamily member 11b
treatment
ISO
CTD Direct Evidence: marker/mechanism associated with alcohol use disorder OMIM:166710
CTD RGD MouseDO
PMID:17667143 PMID:29698972
RGD:598092493
NCBI chr 8:113,520,711...113,549,370
Ensembl chr 8:113,520,596...113,548,936
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TNFRSF1B
TNF receptor superfamily member 1B
ISO
RGD
PMID:17002564
RGD:1625350
NCBI chr20:119,590,621...119,633,562
Ensembl chr20:119,590,325...119,633,497
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TNFSF11
TNF superfamily member 11
ISO
OMIM:166710 CTD Direct Evidence: therapeutic
RGD MouseDO CTD
PMID:17002564 PMID:17882678
RGD:1625350
NCBI chr 3:20,717,884...20,761,520
Ensembl chr 3:20,727,592...20,760,408
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TPI1
triosephosphate isomerase 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr11:6,900,762...6,904,188
Ensembl chr11:6,900,787...6,906,787
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TPM4
tropomyosin 4
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 6:14,566,958...14,604,754
Ensembl chr 6:14,566,869...14,598,934
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TUBA1B
tubulin alpha 1b
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr11:45,365,071...45,368,807
Ensembl chr11:45,364,873...45,368,752
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U2AF1
U2 small nuclear RNA auxiliary factor 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 2:86,949,910...86,964,655
Ensembl chr 2:86,950,056...86,964,579
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VCL
vinculin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr 9:57,253,219...57,375,947
Ensembl chr 9:57,255,166...57,376,028
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VDR
vitamin D receptor
no_association
ISO
associated with Cystic Fibrosis OMIM:166710
RGD MouseDO
PMID:16713399
RGD:4889871
NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684
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WDR1
WD repeat domain 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18924182
NCBI chr27:39,929,749...39,973,892
Ensembl chr27:39,929,787...39,974,012
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WNT1
Wnt family member 1
ISO
ClinVar Annotator: match by term: OSTEOPOROSIS, EARLY-ONSET, SUSCEPTIBILITY TO
ClinVar
PMID:23499309 PMID:23656646 PMID:25741868 PMID:27450065 PMID:28492532 PMID:28725987 PMID:30715774 PMID:30913006 PMID:33093841 PMID:33195954 PMID:34335676 PMID:36056132 PMID:36595228 More...
NCBI chr11:45,217,402...45,222,996
Ensembl chr11:45,219,027...45,222,017
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ZDHHC13
zDHHC palmitoyltransferase 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:20548961
NCBI chr 1:45,819,877...45,873,302
Ensembl chr 1:45,820,339...45,854,299
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RUNX2
RUNX family transcription factor 2
treatment
ISO
RGD
PMID:28363435
RGD:598092495
NCBI chr17:26,679,386...26,807,812
Ensembl chr17:26,683,175...26,807,319
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F12
coagulation factor XII
ISO
ClinVar Annotator: match by term: Nephrolithiasis/osteoporosis, hypophosphatemic
ClinVar
PMID:24033266 PMID:25050900 PMID:25741868 PMID:28492532 PMID:30943683
NCBI chr23:79,414,074...79,438,896
Ensembl chr23:79,414,225...79,432,298
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SLC34A1
solute carrier family 34 member 1
ISO
ClinVar Annotator: match by term: Nephrolithiasis/osteoporosis, hypophosphatemic
ClinVar
PMID:24033266 PMID:25050900 PMID:25741868 PMID:28492532 PMID:30943683
NCBI chr23:79,395,923...79,410,835
Ensembl chr23:79,396,250...79,411,695
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F12
coagulation factor XII
ISO
ClinVar Annotator: match by term: Hypophosphatemic nephrolithiasis/osteoporosis 1
ClinVar
PMID:25050900 PMID:25741868 PMID:28492532 PMID:30943683
NCBI chr23:79,414,074...79,438,896
Ensembl chr23:79,414,225...79,432,298
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SLC34A1
solute carrier family 34 member 1
ISO
ClinVar Annotator: match by term: Hypophosphatemic nephrolithiasis/osteoporosis 1
OMIM ClinVar
PMID:9536098 PMID:12324554 PMID:14672348 PMID:16199547 PMID:16688119 PMID:17576681 PMID:21597970 PMID:24033266 PMID:25050900 PMID:25082825 PMID:25296721 PMID:25741868 PMID:26047794 PMID:26272126 PMID:26787776 PMID:27378183 PMID:28492532 PMID:28893421 PMID:29924459 PMID:29959532 PMID:30778725 PMID:30943683 PMID:31188746 PMID:31672324 PMID:33099630 PMID:33226606 PMID:33536578 PMID:33964006 PMID:34805638 More...
NCBI chr23:79,395,923...79,410,835
Ensembl chr23:79,396,250...79,411,695
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SLC34A3
solute carrier family 34 member 3
ISO
ClinVar Annotator: match by term: Hypophosphatemic nephrolithiasis/osteoporosis 1
ClinVar
PMID:25741868 PMID:28492532 PMID:31672324
NCBI chr12:952,486...958,602
Ensembl chr12:952,278...957,308
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NHERF1
NHERF family PDZ scaffold protein 1
ISO
ClinVar Annotator: match by term: Hypophosphatemic nephrolithiasis/osteoporosis 2 | ClinVar Annotator: match by term: NHERF1-related condition
OMIM ClinVar
PMID:18784102 PMID:24033266 PMID:25326635 PMID:25741868 PMID:28492532 PMID:28893421 PMID:30863428 More...
NCBI chr16:46,889,454...46,910,776
Ensembl chr16:46,888,942...46,910,842
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LRP5
LDL receptor related protein 5
ISO
DNA:mutations:exon:c.3446 T > A (p.L1149Q),c.3553 G > A (p.G1185R)(human)
RGD
PMID:22487062
RGD:12793058
NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383
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COPB2
COPI coat complex subunit beta 2
ISO
ClinVar Annotator: match by term: Osteoporosis, childhood- or juvenile-onset, with developmental delay
OMIM ClinVar
PMID:25741868 PMID:29036432 PMID:34450031 PMID:37734708
NCBI chr15:51,165,275...51,197,971
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ACP5
acid phosphatase 5, tartrate resistant
ISO
protein:increased expression:femur (rat)
RGD
PMID:19736603
RGD:2315910
NCBI chr 6:10,488,572...10,493,508
Ensembl chr 6:10,488,460...10,491,519
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AR
androgen receptor
ISO
RGD
PMID:12593895
RGD:1578682
NCBI chr X:57,380,587...57,553,613
Ensembl chr X:57,380,611...57,546,776
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BMP15
bone morphogenetic protein 15
susceptibility
ISO
DNA:SNPs, haplotype:5' utr, intron:g.-9C>G, IVS1+905A>G (human)
RGD
PMID:22335445
RGD:10045849
NCBI chr X:47,713,434...47,722,818
Ensembl chr X:47,713,957...47,719,777
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CAT
catalase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17227729
NCBI chr 1:30,792,533...30,828,920
Ensembl chr 1:30,792,399...30,829,592
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COL1A1
collagen type I alpha 1 chain
ISO
ClinVar Annotator: match by term: Postmenopausal osteoporosis
ClinVar
PMID:2037280 PMID:2542316 PMID:7695699 PMID:7942841 PMID:8218237 PMID:8408653 PMID:8669434 PMID:8808594 PMID:9016532 PMID:9067755 PMID:9295084 PMID:9443882 PMID:10931857 PMID:12590186 PMID:15024692 PMID:15241796 PMID:15864348 PMID:15931785 PMID:16199547 PMID:16879195 PMID:17078022 PMID:17309652 PMID:18412368 PMID:18553566 PMID:18704262 PMID:19344236 PMID:19358256 PMID:21249479 PMID:21567126 PMID:21667357 PMID:22589248 PMID:22753364 PMID:22855962 PMID:24390061 PMID:25086671 PMID:25741868 PMID:25944380 PMID:25963598 PMID:26177859 PMID:26467025 PMID:27509835 PMID:27510842 PMID:27519266 PMID:28378289 PMID:28492532 PMID:28810924 PMID:31447884 PMID:32166892 PMID:33228694 PMID:33470886 PMID:33928192 PMID:33939306 PMID:35909573 PMID:36709916 More...
NCBI chr16:43,134,648...43,152,313
Ensembl chr16:43,134,779...43,150,930
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COL1A2
collagen type I alpha 2 chain
ISO
ClinVar Annotator: match by term: Postmenopausal osteoporosis
ClinVar
PMID:1463018 PMID:1978725 PMID:2010058 PMID:2052622 PMID:2985635 PMID:7695699 PMID:7860070 PMID:8094076 PMID:8218237 PMID:8786074 PMID:9016532 PMID:9133348 PMID:9272740 PMID:9399846 PMID:9594376 PMID:9923651 PMID:11007540 PMID:12362985 PMID:15172002 PMID:16705691 PMID:16786509 PMID:16879195 PMID:17078022 PMID:17206620 PMID:17211858 PMID:18028452 PMID:19344236 PMID:20301472 PMID:21520333 PMID:22589248 PMID:22753364 PMID:25326637 PMID:25450603 PMID:25741868 PMID:25944380 PMID:26177859 PMID:26307460 PMID:26432670 PMID:26604951 PMID:27519266 PMID:28017821 PMID:28492532 PMID:28518168 PMID:31218159 PMID:32166892 PMID:32461654 PMID:32659730 PMID:33939306 PMID:34091789 PMID:35052464 PMID:36951356 More...
NCBI chr21:54,602,780...54,639,832
Ensembl chr21:54,602,398...54,632,780
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CYP19A1
cytochrome P450 family 19 subfamily A member 1
ISO
DNA:snps:exon:multiple (human)
RGD
PMID:17118999
RGD:1600860
NCBI chr26:32,074,260...32,164,926
Ensembl chr26:32,132,425...32,164,277
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ESR1
estrogen receptor 1
treatment susceptibility
ISO
DNA:SNP:intron:IVS1T>C (human) DNA:SNPs, haplotype:intron: (rs2234693, rs9340799) (human)
RGD
PMID:16604479 PMID:16972020
RGD:10045838 RGD:8158082
NCBI chr13:79,153,418...79,554,552
Ensembl chr13:79,270,265...79,554,549
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ESR2
estrogen receptor 2
susceptibility
ISO
DNA:SNP: :-1213T>C (human) DNA:SNP, haplotype:3'utr:*39A>G (human) DNA:repeat:intron:IVS5-3919(CA)18-26 (human)
RGD
PMID:16777502 PMID:17945165 PMID:22335445
RGD:10045847 RGD:10045849 RGD:1626507
NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486
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FDPS
farnesyl diphosphate synthase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:31774873
NCBI chr20:8,514,311...8,526,363
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FGF23
fibroblast growth factor 23
ISO
protein:increased expression: :
RGD
PMID:24101107
RGD:10044241
NCBI chr11:4,398,318...4,408,415
Ensembl chr11:4,398,675...4,407,209
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HIF1A
hypoxia inducible factor 1 subunit alpha
treatment
ISO
RGD
PMID:18067744 PMID:24023068
RGD:10402191 RGD:10402540
NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288
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IFITM5
interferon induced transmembrane protein 5
ISO
ClinVar Annotator: match by term: Postmenopausal osteoporosis
ClinVar
PMID:22863190 PMID:22863195 PMID:23977282 PMID:25251575 PMID:25741868 PMID:28492532 PMID:28725987 PMID:29174564 PMID:31099171 PMID:31159867 PMID:32383316 PMID:35216266 More...
NCBI chr 1:112,164...113,988
Ensembl chr 1:112,469...113,448
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IGF1
insulin like growth factor 1
ISO
protein:decreased expression:serum:
RGD
PMID:11063288
RGD:10045861
NCBI chr11:97,624,498...97,708,730
Ensembl chr11:97,631,189...97,707,308
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IGF2
insulin like growth factor 2
treatment
ISO
RGD
PMID:16753016
RGD:10402556
NCBI chr 1:1,937,414...1,951,238
Ensembl chr 1:1,936,830...1,945,388
G
IL1B
interleukin 1 beta
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:9032749
NCBI chr14:15,844,628...15,852,652
Ensembl chr14:15,844,672...15,850,729
G
IL6
interleukin 6
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:9032749
NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237
G
IL7
interleukin 7
treatment
ISO
RGD
PMID:23662133
RGD:10402930
NCBI chr 8:74,230,493...74,292,985
Ensembl chr 8:74,231,809...74,292,384
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LRP5
LDL receptor related protein 5
ISO
ClinVar Annotator: match by term: Postmenopausal osteoporosis
ClinVar
PMID:24715757 PMID:25741868 PMID:28492532
NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383
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NFATC1
nuclear factor of activated T cells 1
treatment
ISO
RGD
PMID:31399090
RGD:329328926
NCBI chr18:690,313...815,804
Ensembl chr18:689,671...811,100
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NRIP1
nuclear receptor interacting protein 1
susceptibility
ISO
DNA:silent mutation:cds:p.G75G (human)
RGD
PMID:22335445
RGD:10045849
NCBI chr 2:77,480,398...77,583,985
Ensembl chr 2:77,577,029...77,580,496
G
PGGHG
protein-glucosylgalactosylhydroxylysine glucosidase
ISO
ClinVar Annotator: match by term: Postmenopausal osteoporosis
ClinVar
PMID:22863190 PMID:22863195 PMID:23977282 PMID:25251575 PMID:25741868 PMID:28492532 PMID:28725987 PMID:29174564 PMID:31099171 PMID:31159867 PMID:32383316 PMID:35216266 More...
NCBI chr 1:102,388...109,337
Ensembl chr 1:102,136...108,370
G
PLS3
plastin 3
ISO
ClinVar Annotator: match by term: Postmenopausal osteoporosis
ClinVar
PMID:25741868
G
PTGER4
prostaglandin E receptor 4
treatment
ISO
RGD
PMID:11917107
RGD:10003045
NCBI chr 4:39,440,697...39,453,983
Ensembl chr 4:39,440,276...39,454,004
G
PTH
parathyroid hormone
ISO
CTD Direct Evidence: therapeutic
CTD
PMID:20567999
NCBI chr 1:51,327,555...51,330,810
G
PTK2B
protein tyrosine kinase 2 beta
ISO
RGD
PMID:17537919
RGD:1642610
NCBI chr 8:25,437,680...25,571,594
Ensembl chr 8:25,437,564...25,571,782
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TGFB1
transforming growth factor beta 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:10750555
NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365
G
TNF
tumor necrosis factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:9032749
G
VDR
vitamin D receptor
treatment
ISO
DNA:SNP:exon: (rs2228570) (human)
RGD
PMID:16604479
RGD:8158082
NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684
G
IFIH1
interferon induced with helicase C domain 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chr10:47,676,799...47,732,310
Ensembl chr10:47,676,920...47,732,264
G
IFIH1
interferon induced with helicase C domain 1
ISO
ClinVar Annotator: match by term: Singleton-Merten syndrome 1
OMIM ClinVar
PMID:9536098 PMID:16199547 PMID:17576681 PMID:19264985 PMID:19324880 PMID:19763152 PMID:20307669 PMID:21070929 PMID:22406018 PMID:24686847 PMID:24995871 PMID:25620204 PMID:25741868 PMID:26284909 PMID:26833990 PMID:27477329 PMID:28008999 PMID:28319323 PMID:28475458 PMID:28492532 PMID:28605144 PMID:28606988 PMID:28716935 PMID:29018476 PMID:29270977 PMID:30219631 PMID:30564185 PMID:30707351 PMID:31069529 PMID:31178897 PMID:31898846 PMID:32853466 PMID:33440462 PMID:34185153 PMID:34539730 PMID:34975878 PMID:35086391 PMID:35211430 PMID:35754802 PMID:36703223 PMID:37342449 More...
NCBI chr10:47,676,799...47,732,310
Ensembl chr10:47,676,920...47,732,264
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RIGI
RNA sensor RIG-I
ISO
ClinVar Annotator: match by term: RIGI-related condition | ClinVar Annotator: match by term: Singleton-Merten syndrome 2
OMIM ClinVar
PMID:25620203 PMID:25741868 PMID:28180316 PMID:28492532
NCBI chr12:47,729,040...47,800,995
Ensembl chr12:47,729,076...47,799,570
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LPCAT2
lysophosphatidylcholine acyltransferase 2
ISO
ClinVar Annotator: match by term: Winchester-Grossman syndrome
ClinVar
NCBI chr 5:41,293,191...41,369,443
Ensembl chr 5:41,294,580...41,372,825
G
MMP14
matrix metallopeptidase 14
ISO
ClinVar Annotator: match by term: MMP14-related condition | ClinVar Annotator: match by term: Winchester syndrome | ClinVar Annotator: match by term: Winchester-Grossman syndrome
OMIM ClinVar
PMID:4238825 PMID:9536098 PMID:17480005 PMID:17576681 PMID:22922033 PMID:25741868 PMID:28492532 PMID:29741626 More...
NCBI chr29:23,201,425...23,212,408
Ensembl chr29:23,201,112...23,212,679
G
MMP2
matrix metallopeptidase 2
ISO
ClinVar Annotator: match by term: Winchester-Grossman syndrome
ClinVar
PMID:9536098 PMID:11431697 PMID:16458924 PMID:17576681 PMID:19019335 PMID:20617897 PMID:20673868 PMID:21421877 PMID:23313298 PMID:23378725 PMID:25600631 PMID:25704319 PMID:25741868 PMID:27182040 PMID:28492532 More...
NCBI chr 5:41,264,382...41,291,657
Ensembl chr 5:41,264,354...41,291,004
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all
Path 1
disease
15628
Diseases of the Aged
1223
osteoporosis
141
Amino Aciduria with Mental Deficiency, Dwarfism, Muscular Dystrophy, Osteoporosis, and Acidosis
0
Diabetic Bone Disease
0
Female Athlete Triad Syndrome
0
Growth Failure, Microcephaly, Mental Retardation, Cataracts, Large Joint Contractures, Osteoporosis, Cortical Dysplasia, and Cerebellar Atrophy
0
Hernandez Fragoso Syndrome
0
Infantile Multisystem Neurologic Disease with Osseous Fragility
0
Macroepiphyseal Dysplasia, McAlister Coe Type
0
Osteoporosis, Childhood- or Juvenile-Onset, with Developmental Delay
1
Postmenopausal Osteoporosis
29
Prader-Willi Habitus, Osteopenia, and Camptodactyly
0
Premature Aging, Okamoto Type
0
Singleton Merten Syndrome +
2
Winchester syndrome
3
glucocorticoid-induced osteoporosis
1
hypophosphatemic nephrolithiasis/osteoporosis +
4
idiopathic juvenile osteoporosis
1
Path 2
disease
15628
disease of anatomical entity
15289
Skin and Connective Tissue Diseases
7138
connective tissue disease
5437
bone disease
3928
bone remodeling disease
310
bone resorption disease
183
osteoporosis
141
Amino Aciduria with Mental Deficiency, Dwarfism, Muscular Dystrophy, Osteoporosis, and Acidosis
0
Diabetic Bone Disease
0
Female Athlete Triad Syndrome
0
Growth Failure, Microcephaly, Mental Retardation, Cataracts, Large Joint Contractures, Osteoporosis, Cortical Dysplasia, and Cerebellar Atrophy
0
Hernandez Fragoso Syndrome
0
Infantile Multisystem Neurologic Disease with Osseous Fragility
0
Macroepiphyseal Dysplasia, McAlister Coe Type
0
Osteoporosis, Childhood- or Juvenile-Onset, with Developmental Delay
1
Postmenopausal Osteoporosis
29
Prader-Willi Habitus, Osteopenia, and Camptodactyly
0
Premature Aging, Okamoto Type
0
Singleton Merten Syndrome +
2
Winchester syndrome
3
glucocorticoid-induced osteoporosis
1
hypophosphatemic nephrolithiasis/osteoporosis +
4
idiopathic juvenile osteoporosis
1