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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:stomach cancer
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Accession:DOID:10534 term browser browse the term
Definition:A gastrointestinal system cancer that is located_in the stomach. (DO)
Synonyms:exact_synonym: cancer of stomach;   cancer of the stomach;   gastric cancer;   gastric cancers;   stomach cancers
 narrow_synonym: GASTRIC CANCER, FAMILIAL DIFFUSE BREAST CANCER, LOBULAR;   GASTRIC CANCER, FAMILIAL DIFFUSE, AND CLEFT LIP WITH OR WITHOUT CLEFT PALATE;   intestinal gastric cancer
 xref: GARD:7704;   ICD10CM:C16;   ICD10CM:C16.2;   ICD10CM:C16.5;   ICD10CM:C16.6;   ICD9CM:151;   ICD9CM:151.4;   ICD9CM:151.5;   ICD9CM:151.6;   NCI:C3387;   NCI:C9331
For additional species annotation, visit the Alliance of Genome Resources.


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stomach cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO human cells in mouse model; associated with mental depression; protein:increased expression, increased phosphorylation:stomach (human) RGD PMID:31396300 RGD:126908003 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Ace angiotensin I converting enzyme susceptibility ISO DNA:insertion/deletion, haplotype:intron 16: RGD PMID:17035401 RGD:39939122 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Adar adenosine deaminase, RNA-specific exacerbates ISO mRNA:increased expression:mucosa of stomach (human) RGD PMID:30563560 RGD:14700703 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 disease_progression ISO RGD PMID:11172604 RGD:13831357 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B ISO mRNA:decreased expression:stomach (human) RGD PMID:23808167 RGD:8548675 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Anxa1 annexin A1 IEP RGD PMID:23236538 RGD:7421587 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Arid1a AT-rich interaction domain 1A treatment
susceptibility
disease_progression
exacerbates
ISO human gene in mouse model
DNA:missense mutation, nonsense mutation:exon 9: Pro912Thr (C>A), Gln920Ter (C >T) (Human)
protein:decreased expression:stomach (human)
mRNA:decreased expression:stomach (human)
RGD PMID:27323812, PMID:32377988, PMID:30747208, PMID:32387347, PMID:29689245, PMID:29317648, PMID:28031120 RGD:125097523, RGD:126848772, RGD:126790641, RGD:126790633, RGD:126781725, RGD:126781705, RGD:125097489 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Arid1b AT-rich interaction domain 1B disease_progression ISO protein:decreased expression:stomach (human) RGD PMID:26637902 RGD:126848744 NCBI chr 1:45,923,119...46,232,301
Ensembl chr 1:45,923,222...46,234,874
JBrowse link
G Arid2 AT-rich interaction domain 2 onset ISO protein:decreased expression:stomach (human) RGD PMID:26637902 RGD:126848744 NCBI chr 7:137,680,564...137,798,329
Ensembl chr 7:137,680,530...137,795,655
JBrowse link
G Arpc1b actin related protein 2/3 complex, subunit 1B ISO mRNA:decreased expression:gastric epithelium (human) RGD PMID:15279900 RGD:11046270 NCBI chr12:11,252,300...11,265,849
Ensembl chr12:11,252,296...11,265,865
JBrowse link
G Aspm assembly factor for spindle microtubules ISO mRNA,protein:increased expression:stomach: RGD PMID:26178168 RGD:13439749 NCBI chr13:56,546,021...56,591,793
Ensembl chr13:56,546,021...56,591,793
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta ISO DNA:hypermethylation:exon, stomach, plasma RGD PMID:23317218 RGD:14696738 NCBI chr16:81,136,218...81,145,131
Ensembl chr16:81,136,218...81,145,131
JBrowse link
G Bambi BMP and activin membrane-bound inhibitor disease_progression ISO RGD PMID:24752577 RGD:14390158 NCBI chr17:56,905,419...56,909,675
Ensembl chr17:56,905,112...56,909,992
JBrowse link
G Barhl2 BarH-like homeobox 2 treatment ISO RGD PMID:27441821 RGD:14392685 NCBI chr14:4,362,717...4,367,614
Ensembl chr14:4,362,717...4,367,605
JBrowse link
G Bax BCL2 associated X, apoptosis regulator treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Brca1 BRCA1, DNA repair associated susceptibility
treatment
ISO DNA:SNP: :rs799917 (human) RGD PMID:25266802, PMID:23633032 RGD:126925956, RGD:126925962 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Bst2 bone marrow stromal cell antigen 2 disease_progression ISO RGD PMID:26832883 RGD:14398496 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353
JBrowse link
G Capn9 calpain 9 ISO RGD PMID:10835488 RGD:734688 NCBI chr19:57,341,938...57,378,901
Ensembl chr19:57,341,938...57,378,901
JBrowse link
G Casp3 caspase 3 treatment ISO human cells in mouse model RGD PMID:29408335, PMID:32106377 RGD:127284846, RGD:127284886 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Casp9 caspase 9 treatment ISO human cells in mouse model RGD PMID:29408335, PMID:32106377 RGD:127284846, RGD:127284886 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Cbx7 chromobox 7 disease_progression ISO protein:increased expression:stomach: RGD PMID:20723236 RGD:9587358 NCBI chr 7:121,136,067...121,153,503
Ensembl chr 7:121,136,058...121,153,383
JBrowse link
G Cd1d1 CD1d1 molecule disease_progression ISO mRNA:splice variant:pyloric antrum (human)) RGD PMID:26119195 RGD:11074500 NCBI chr 2:186,330,298...186,333,805
Ensembl chr 2:186,330,298...186,333,805
JBrowse link
G Cd274 CD274 molecule disease_progression ISO RGD PMID:32380498, PMID:32089413 RGD:40818238, RGD:41410803 NCBI chr 1:247,519,890...247,539,659
Ensembl chr 1:247,519,939...247,537,943
JBrowse link
G Cd8a CD8a molecule ameliorates ISO associated with Epstein-Barr Virus Infections;mRNA:increased expression:stomach (human)
protein:decreased expression:stomach, T cell (human)
RGD PMID:29915957, PMID:30106451 RGD:124715442, RGD:124715443 NCBI chr 4:99,217,640...99,243,352
Ensembl chr 4:99,239,115...99,243,351
JBrowse link
G Cdh1 cadherin 1 ISO ClinVar Annotator: match by term: Gastric cancer, familial diffuse, and cleft lip with or without cleft palate ClinVar PMID:15831593 PMID:17221870 PMID:17545690 PMID:17576681 PMID:18427545 PMID:19269290 PMID:19725995 PMID:19965908 PMID:21681551 PMID:23709761 PMID:25741868 PMID:26025002 PMID:27682646 PMID:27995193 PMID:28492532 PMID:30426508 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 ISO RGD PMID:16270381 RGD:14700945 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 disease_progression ISO RGD PMID:22957075 RGD:14700909 NCBI chr 1:213,511,892...213,522,195
Ensembl chr 1:213,511,874...213,535,542
JBrowse link
G Dicer1 dicer 1 ribonuclease III disease_progression ISO RGD PMID:18167183 RGD:149735323 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha susceptibility ISO DNA:polymorphism:promoter:-488A>G(rs36012910)(human) RGD PMID:20128888 RGD:9589068 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 ISO protein:decreased expression:stomach: RGD PMID:21789020 RGD:10401218 NCBI chr17:26,785,017...26,795,723
Ensembl chr17:26,785,029...26,797,161
JBrowse link
G Egfr epidermal growth factor receptor treatment ISO associated with Helicobacter Infections RGD PMID:28473630 RGD:38599214 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit treatment
severity
no_association
disease_progression
ISO DNA:snp:3' utr:c.*197G>T (rs3212986) (human)
DNA:snp:intron:c.-7-277G>T (human) (rs2298881)
DNA:snps:exon, intron:c.354T>C, c.-7-277G>T (human) (rs11615, rs2298881)
DNA:SNP:exon:354C>T (human)
RGD PMID:23338051, PMID:27173253, PMID:24793015, PMID:24318989, PMID:26499900 RGD:11252163, RGD:13207427, RGD:13207425, RGD:13207309, RGD:11340202 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit disease_progression ISO DNA:SNP:exon:p.K751Q (2251A>C) (rs13181) (human) RGD PMID:26499900 RGD:11340202 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit treatment
disease_progression
susceptibility
ISO DNA:SNPs: :multiple RGD PMID:25595591, PMID:16734726, PMID:22228224 RGD:14928319, RGD:126781698, RGD:126779605 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 severity ISO protein:increased expression:stomach (human) RGD PMID:9816310 RGD:12801419 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Gldc glycine decarboxylase ISO mRNA:decreased expression:stomach: RGD PMID:26722042 RGD:12904663 NCBI chr 1:248,295,140...248,377,122
Ensembl chr 1:248,297,331...248,377,093
JBrowse link
G Gstm1 glutathione S-transferase mu 1 susceptibility
no_association
ISO DNA:deletion:cds (human) RGD PMID:1427788, PMID:16273625, PMID:12406553, PMID:15112335, PMID:11957090, PMID:24375038, PMID:16270381, PMID:16886896 RGD:7488951, RGD:14700977, RGD:14700964, RGD:14700949, RGD:14700947, RGD:14700946, RGD:14700945, RGD:14700936 NCBI chr 2:210,803,869...210,809,461
Ensembl chr 2:210,803,869...210,809,306
JBrowse link
G Gstt1 glutathione S-transferase theta 1 ISO associated with Helicobacter Infections RGD PMID:16886896, PMID:11819818, PMID:22139978 RGD:14700936, RGD:14700994, RGD:14700984 NCBI chr20:13,799,102...13,816,527
Ensembl chr20:13,799,102...13,816,526
JBrowse link
G Hdac2 histone deacetylase 2 disease_progression ISO RGD PMID:15865607, PMID:23175521 RGD:9590322, RGD:9590325 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Htra2 HtrA serine peptidase 2 ISO protein:increased expression:gastric mucosa (human) RGD PMID:12887511 RGD:5688748 NCBI chr 4:113,883,671...113,886,833
Ensembl chr 4:113,883,670...113,886,994
JBrowse link
G Il10 interleukin 10 ISO DNA:SNP:promoter:-819C>T (rs1800871) (human) RGD PMID:28002581, PMID:30610790 RGD:14975135, RGD:14975253 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il1b interleukin 1 beta susceptibility ISO DNA:polymorphism:promoter:-31T>C (human)
associated with mental depression; human cells in mouse model; protein:increased expression:blood serum, stomach (human)
RGD PMID:21653279, PMID:31396300 RGD:7401222, RGD:126908003 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il6 interleukin 6 no_association ISO human cells in mouse model;associated with mental depression; protein:increased expression:blood serum, stomach (human)
DNA:SNPs: :rs6949149 (human)
DNA:SNPs: :rs1800796, rs10499563 (human)
DNA:SNP: :rs2069837 (human)
RGD PMID:30610790, PMID:31396300, PMID:28442395, PMID:28442395, PMID:27049718 RGD:14975253, RGD:126908003, RGD:14975291, RGD:14975291, RGD:14975290 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Il6r interleukin 6 receptor ISO DNA:SNP: :rs2228145 (human) RGD PMID:28442395 RGD:14975291 NCBI chr 2:189,196,180...189,255,987
Ensembl chr 2:189,205,701...189,254,628
JBrowse link
G Il6st interleukin 6 cytokine family signal transducer ISS OMIM:137215 | OMIM:613659 MouseDO NCBI chr 2:44,279,199...44,319,427
Ensembl chr 2:44,289,393...44,314,944
JBrowse link
G Jak2 Janus kinase 2 susceptibility
treatment
ISO DNA:SNPs:exon, promoter: (rs2230724, rs1887427) (human)
human cells in mouse model
associated with Helicobacter Infections; protein:increased expression:stomach (human)
RGD PMID:23717640, PMID:32106377, PMID:29408335, PMID:24718681 RGD:126925979, RGD:127284886, RGD:127284846, RGD:126928128 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 ISO protein:increased expression:gastric mucosa (human) RGD PMID:16258262 RGD:9686069 NCBI chr 4:159,077,195...159,079,003
Ensembl chr 4:159,077,195...159,079,003
JBrowse link
G Kdm4b lysine demethylase 4B severity
treatment
ISO mRNA:increased expression:gastric mucosa (human)
human gene in a mouse model
RGD PMID:22133676, PMID:24077348, PMID:22133676 RGD:9587739, RGD:9587753, RGD:9587739 NCBI chr 9:10,656,035...10,734,127
Ensembl chr 9:10,653,216...10,734,073
JBrowse link
G Kdr kinase insert domain receptor disease_progression
no_association
ISO DNA:SNP: :rs1870377 (human)
DNA:SNPs: :rs7667298, rs2071559, rs2305948 (human)
RGD PMID:30380970, PMID:30380970 RGD:126907999, RGD:126907999 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Kif18a kinesin family member 18A disease_progression ISO RGD PMID:27215532 RGD:11554202 NCBI chr 3:100,366,168...100,426,867
Ensembl chr 3:100,366,168...100,427,030
JBrowse link
G Mir125a microRNA 125a disease_progression
severity
ISO RGD PMID:30117667, PMID:22322911 RGD:21403678, RGD:21408544 NCBI chr 1:59,704,827...59,704,911
Ensembl chr 1:59,704,827...59,704,911
JBrowse link
G Mir146a microRNA 146a ameliorates ISO associated with Helicobacter Infections;miRNA:increased expression:stomach (human) RGD PMID:25081668 RGD:126925145 NCBI chr10:28,962,476...28,962,570
Ensembl chr10:28,962,476...28,962,570
JBrowse link
G Mir152 microRNA 152 disease_progression ISO miRNA:decreased expression:stomach
DNA:SNPs, haplotypes
RGD PMID:28427226, PMID:25261463, PMID:20422307 RGD:19165143, RGD:21066330, RGD:19165151 NCBI chr10:84,719,319...84,719,403
Ensembl chr10:84,719,319...84,719,403
JBrowse link
G Mir155 microRNA 155 disease_progression ISO miRNA:decreased expression:stomach RGD PMID:31103022, PMID:29250766, PMID:30008945 RGD:21081514, RGD:21408595, RGD:21403680 NCBI chr11:24,176,603...24,176,667
Ensembl chr11:24,176,603...24,176,667
JBrowse link
G Mir223 microRNA 223 ISO associated with Helicobacter Infections; mRNA:increased expression:stomach (human) RGD PMID:29317648 RGD:126781705 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mir30a microRNA 30a severity
treatment
ISO RGD PMID:32116236, PMID:32116236 RGD:35673292, RGD:35673292 NCBI chr 9:29,542,635...29,542,705
Ensembl chr 9:29,542,635...29,542,705
JBrowse link
G Mir375 microRNA 375 ISO associated with Helicobacter Infections; protein:decreased expression:stomach (human) RGD PMID:24718681 RGD:126928128 NCBI chr 9:82,161,716...82,161,790
Ensembl chr 9:82,161,716...82,161,790
JBrowse link
G Mki67 marker of proliferation Ki-67 treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr 1:207,993,895...208,020,454
Ensembl chr 1:207,993,895...208,020,454
JBrowse link
G Mt-co2 mitochondrially encoded cytochrome c oxidase II ISO human cells in mouse model;associated with mental depression; protein:increased expression:blood serum, stomach (mouse) RGD PMID:31396300 RGD:126908003 NCBI chr MT:7,006...7,689
Ensembl chr MT:7,006...7,689
JBrowse link
G Mthfr methylenetetrahydrofolate reductase no_association ISO DNA:missense mutation:cds:g.677C>T (human) RGD PMID:24615072, PMID:23183616 RGD:38501052, RGD:38501056 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mutyh mutY DNA glycosylase ISO ClinVar Annotator: match by term: Stomach cancer ClinVar PMID:15180946 PMID:15890374 PMID:17703316 PMID:18271935 PMID:22641385 PMID:22703879 PMID:24033266 PMID:24377541 PMID:24728327 PMID:24733792 PMID:24799981 PMID:25741868 PMID:25856671 PMID:25927356 PMID:26296696 PMID:26332594 PMID:26436112 PMID:26467025 PMID:26684149 PMID:26684191 PMID:26824983 PMID:26837502 PMID:26902849 PMID:27077130 PMID:27443514 PMID:28135145 PMID:28166811 PMID:28195393 PMID:28251689 PMID:28332257 PMID:28445943 PMID:28492532 PMID:28495237 PMID:28526081 PMID:28944238 PMID:29093764 PMID:29330641 PMID:29431110 PMID:30093976 PMID:30833417 PMID:30886832 PMID:30982232 PMID:31575519 PMID:33309985 PMID:33471991 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO mRNA:increased expression:stomach RGD PMID:19878654 RGD:28867241 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO human cells in mouse model; associated with mental depression; protein:increased phosphorylation:stomach (human) RGD PMID:31396300 RGD:126908003 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex ISO mRNA:increased expression:stomach RGD PMID:19878654, PMID:19081476 RGD:28867241, RGD:28867243 NCBI chr13:87,818,456...87,847,223
Ensembl chr13:87,818,391...87,847,263
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 treatment ISO human cells in a mouse model
human cells in mouse model
RGD PMID:29408335 PMID:32106377 RGD:127284846 RGD:127284886 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pdcd1 programmed cell death 1 disease_progression ISO associated with Epstein-Barr Virus Infections RGD PMID:32380498, PMID:27465786 RGD:40818238, RGD:41410790 NCBI chr 9:101,305,742...101,319,937
Ensembl chr 9:101,307,764...101,319,845
Ensembl chr 9:101,307,764...101,319,845
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha disease_progression ISO associated with Epstein-Barr Virus Infections; DNA,protein:mutations:exon:
protein:increased expression:stomach (human)
Epstein-Barr Virus negative patient
RGD PMID:30952761, PMID:30747208, PMID:26980034 RGD:40818110, RGD:126790641, RGD:40818111 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pten phosphatase and tensin homolog ISO protein:decreased expression:stomach (human) RGD PMID:27572739 RGD:127285615 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO DNA:SNPs::rs12229892, rs2301756(human) RGD PMID:27614952 RGD:39128246 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G RT1-Ba RT1 class II, locus Ba susceptibility ISO associated with Helicobacter Infections;DNA:polymorphism: :HLA-DQA1*0503 (human) RGD PMID:15622476 RGD:126928143 NCBI chr20:4,066,133...4,070,726
Ensembl chr20:4,066,132...4,070,721
JBrowse link
G Runx1 RUNX family transcription factor 1 disease_progression ISO mRNA:decreased expression:stomach RGD PMID:15386419 RGD:126775146 NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021
JBrowse link
G Runx3 RUNX family transcription factor 3 disease_progression ISO mRNA:decreased expression:stomach RGD PMID:15386419 RGD:126775146 NCBI chr 5:153,507,093...153,531,137
Ensembl chr 5:153,507,093...153,531,137
JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:12469139 RGD:1581255 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase treatment ISO human cells in mouse model RGD PMID:29408335 RGD:127284846 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO mRNA:increased expression:stomach (human) RGD PMID:20938052 RGD:11038731 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Stat3 signal transducer and activator of transcription 3 treatment ISO human cells in mouse model, associated with mental depression; protein:increased phosphorylation:stomach (human) RGD PMID:31396300, PMID:29408335 RGD:126908003, RGD:127284846 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 susceptibility ISO DNA:missense mutation:cds:p.R213H (human) RGD PMID:16137826 RGD:1581452 NCBI chr 1:198,100,586...198,104,106
Ensembl chr 1:198,100,586...198,104,109
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO protein:increased expression:gastric mucosa (human) RGD PMID:20127252 RGD:2317220 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Tff1 trefoil factor 1 ISS OMIM:137215 | OMIM:613659 MouseDO NCBI chr20:9,892,124...9,895,984
Ensembl chr20:9,892,124...9,895,984
JBrowse link
G Tp53 tumor protein p53 ISO DNA:missense mutation::p.R337H (human)
DNA:frameshift mutations,nonsense mutations, missense mutations: : multiple
RGD PMID:28387921, PMID:27323394 RGD:14995484, RGD:14995495 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Txnip thioredoxin interacting protein IEP mRNA:decreased expression:stomach RGD PMID:12553030 RGD:1642760 NCBI chr 2:198,683,168...198,686,971
Ensembl chr 2:198,683,159...198,686,974
JBrowse link
cardia cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfr methylenetetrahydrofolate reductase no_association ISO associated with stomach cancer;DNA:missense mutation:cds:g.677C>T (human) RGD PMID:24615072 RGD:38501052 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
gastric adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25326637 PMID:26619011 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:17611497 PMID:18256540 PMID:18392055 PMID:18504432 PMID:18611285 PMID:19418217 PMID:19487299 PMID:19853286 PMID:20233444 PMID:20453058 PMID:21464312 PMID:21512767 PMID:21793738 PMID:22538770 PMID:22610119 PMID:22722201 PMID:22722839 PMID:22980975 PMID:23237847 PMID:23348505 PMID:23700467 PMID:23728071 PMID:23934607 PMID:24190505 PMID:24657128 PMID:25157968 PMID:26619011 PMID:28492532 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 ISO mRNA:increased expression:serosa of stomach (human) RGD PMID:15107827 RGD:13838842 NCBI chr 7:138,704,124...138,707,221
Ensembl chr 7:138,704,126...138,707,221
JBrowse link
G Arid1a AT-rich interaction domain 1A exacerbates
disease_progression
severity
ISO mRNA, protein:decreased expression:mucosa of stomach (human)
protein:decreased expression:stomach (human)
mRNA:decreased expression:mucosa of stomach (human)
RGD PMID:24293408, PMID:22808142, PMID:25717252 RGD:125097521, RGD:125097488, RGD:126848753 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G B2m beta-2 microglobulin ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:12068308 PMID:12198537 PMID:12960123 PMID:14679157 PMID:15035987 PMID:16187918 PMID:19206169 PMID:21639808 PMID:22048237 PMID:22495831 PMID:22663011 PMID:22972589 PMID:24033266 PMID:24451042 PMID:25157968 PMID:26619011 PMID:28492532 PMID:28832562 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Cat catalase ISO protein:decreased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Cd44 CD44 molecule (Indian blood group) disease_progression ISO mRNA, protein:splice variant, increased expression:stomach RGD PMID:16425351 RGD:2289356 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cdh1 cadherin 1 severity ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach
mRNA:decreased expression:mucosa of stomach (human)
ClinVar
RGD
PMID:10896919 PMID:11968083 PMID:12588804 PMID:12944922 PMID:14500541 PMID:14562278 PMID:16112667 PMID:16527687 PMID:16929514 PMID:17510211 PMID:19247957 PMID:19268661 PMID:19269290 PMID:21989054 PMID:22850631 PMID:24293408 PMID:24690483 PMID:24784840 PMID:25180051 PMID:25187893 PMID:25388006 PMID:25741868 PMID:25856671 PMID:26072394 PMID:26467025 PMID:26822949 PMID:27121310 PMID:27582386 PMID:28492532 PMID:28503720 PMID:28580595 PMID:29752822 PMID:30287823 RGD:125097521 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:7780957 PMID:8521414 PMID:8595405 PMID:8723678 PMID:9324288 PMID:9751050 PMID:9823374 PMID:10491434 PMID:11477665 PMID:11500805 PMID:11687599 PMID:12072543 PMID:16234564 PMID:16896043 PMID:16905682 PMID:18573309 PMID:21462282 PMID:25157968 PMID:25356972 PMID:25741868 PMID:26619011 PMID:26681309 PMID:26775776 PMID:28492532 PMID:28830827 PMID:29983899 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 9:81,783,349...81,808,815
Ensembl chr 9:81,783,349...81,808,805
JBrowse link
G Crebbp CREB binding protein ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:21390126 PMID:21680795 PMID:21796119 PMID:22832583 PMID:23334668 PMID:23685749 PMID:23778141 PMID:26087898 PMID:26619011 PMID:27257180 PMID:28492532 PMID:28970362 PMID:29551561 PMID:33560380 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:9065402 PMID:9065403 PMID:9294210 PMID:9927029 PMID:10027390 PMID:10192393 PMID:10391090 PMID:10666372 PMID:11351304 PMID:11930117 PMID:11950921 PMID:12124804 PMID:15133491 PMID:19234609 PMID:23265383 PMID:25157968 PMID:26619011 PMID:26822237 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:15457249 PMID:16397024 PMID:16988931 PMID:18339846 PMID:18413839 PMID:22046346 PMID:22908275 PMID:23220880 PMID:24033266 PMID:24516025 PMID:25157968 PMID:26619011 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25741868 PMID:26619011 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:10766980 PMID:23819449 PMID:25741868 PMID:26619011 PMID:26822237 PMID:26942290 PMID:27626068 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:7719344 PMID:8651276 PMID:9462761 PMID:9719378 PMID:10851026 PMID:11121055 PMID:11390973 PMID:12124745 PMID:14499350 PMID:15975938 PMID:16440883 PMID:17525745 PMID:18552176 PMID:20301628 PMID:21367659 PMID:22238366 PMID:22664175 PMID:23002168 PMID:23495007 PMID:23546041 PMID:24489893 PMID:25157968 PMID:25741868 PMID:25867380 PMID:26380986 PMID:26619011 PMID:28492532 PMID:31145570 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Gnas GNAS complex locus ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1594625 PMID:1944469 PMID:2549426 PMID:3720010 PMID:7739708 PMID:8766942 PMID:9626141 PMID:12727968 PMID:12970318 PMID:15126527 PMID:16507630 PMID:21835143 PMID:23536913 PMID:24855271 PMID:25157968 PMID:26619011 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 severity ISO mRNA:decreased expression:gastric adenocarcinoma (human) RGD PMID:23007704 RGD:9854641
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 PMID:16881968 PMID:16969868 PMID:17054105 PMID:17211612 PMID:17384584 PMID:17412879 PMID:17979197 PMID:18039947 PMID:18042262 PMID:18247425 PMID:18978862 PMID:19206176 PMID:19213030 PMID:19255327 PMID:19371735 PMID:19382114 PMID:19669404 PMID:19773371 PMID:20660566 PMID:20859122 PMID:20979192 PMID:21438134 PMID:21495179 PMID:21686750 PMID:21834037 PMID:21850009 PMID:22087699 PMID:22256804 PMID:22317973 PMID:22495892 PMID:22499344 PMID:22683711 PMID:22726224 PMID:22926243 PMID:23093928 PMID:23096712 PMID:23406027 PMID:23429430 PMID:23751039 PMID:23884457 PMID:24006476 PMID:24033266 PMID:24129065 PMID:24169525 PMID:24224811 PMID:24390138 PMID:24803665 PMID:25157968 PMID:25326635 PMID:25741868 PMID:25914166 PMID:26619011 PMID:27195699 PMID:27589201 PMID:28027064 PMID:28139825 PMID:28492532 PMID:29493581 PMID:31394527 PMID:31775759 PMID:168335863 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Il1b interleukin 1 beta ISO protein:increased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il6 interleukin 6 ISO protein:increased expression:blood serum (human) RGD PMID:31396300 RGD:126908003 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Irf1 interferon regulatory factor 1 ISO RGD PMID:9679752 RGD:1600013 NCBI chr10:39,109,530...39,116,532
Ensembl chr10:39,109,522...39,116,531
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:7530509 PMID:9438854 PMID:11073817 PMID:11276010 PMID:11526490 PMID:15790786 PMID:16908931 PMID:17372901 PMID:17824795 PMID:18510589 PMID:18980976 PMID:20545949 PMID:22626674 PMID:23648119 PMID:25157968 PMID:26619011 PMID:28492532 PMID:29098070 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:2278970 PMID:3122217 PMID:12460918 PMID:15696205 PMID:16361624 PMID:16434492 PMID:16618717 PMID:18316791 PMID:18794081 PMID:19075190 PMID:19114683 PMID:19679400 PMID:20921462 PMID:20921465 PMID:21228335 PMID:22407852 PMID:22722830 PMID:23325582 PMID:25157968 PMID:26619011 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:11150980 PMID:12835555 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 PMID:16881968 PMID:16969868 PMID:17054105 PMID:17211612 PMID:17384584 PMID:17412879 PMID:17979197 PMID:18039947 PMID:18042262 PMID:18247425 PMID:18978862 PMID:19206176 PMID:19213030 PMID:19255327 PMID:19371735 PMID:19382114 PMID:19669404 PMID:19773371 PMID:20660566 PMID:20859122 PMID:20979192 PMID:21438134 PMID:21495179 PMID:21686750 PMID:21834037 PMID:21850009 PMID:22087699 PMID:22256804 PMID:22317973 PMID:22495892 PMID:22499344 PMID:22683711 PMID:22726224 PMID:22926243 PMID:23093928 PMID:23096712 PMID:23406027 PMID:23429430 PMID:23751039 PMID:23884457 PMID:24006476 PMID:24033266 PMID:24129065 PMID:24169525 PMID:24224811 PMID:24390138 PMID:24803665 PMID:25157968 PMID:25326635 PMID:25741868 PMID:25914166 PMID:26619011 PMID:27195699 PMID:27589201 PMID:28027064 PMID:28139825 PMID:28492532 PMID:29493581 PMID:31394527 PMID:31775759 PMID:168335863 NCBI chr 1:214,182,232...214,197,184
Ensembl chr 1:214,182,830...214,197,184
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:23444215 PMID:25157968 PMID:26619011 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:18042262 PMID:26619011 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
G Med12 mediator complex subunit 12 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812
JBrowse link
G Mir20a microRNA 20a ISO miRNA:increased expression:stomach, serum,extracellular exosome RGD PMID:27756776 RGD:25823155 NCBI chr15:100,180,334...100,180,418
Ensembl chr15:100,180,334...100,180,418
JBrowse link
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:15340264 PMID:17510385 PMID:18307539 PMID:19419416 PMID:22136435 PMID:22703879 PMID:24033266 PMID:24728327 PMID:25157968 PMID:25741868 PMID:25823662 PMID:28492532 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1654209 PMID:2278970 PMID:2407301 PMID:2674680 PMID:2989702 PMID:3102434 PMID:3122217 PMID:6587382 PMID:8120410 PMID:10598665 PMID:10821536 PMID:12460918 PMID:12727991 PMID:14508525 PMID:14982869 PMID:15046639 PMID:15831708 PMID:15899789 PMID:15951308 PMID:16273091 PMID:16291983 PMID:16434492 PMID:16518851 PMID:17332249 PMID:17384584 PMID:17517660 PMID:17699718 PMID:18375819 PMID:18390968 PMID:18633438 PMID:18668139 PMID:18794081 PMID:18948947 PMID:18952898 PMID:19047918 PMID:19075190 PMID:19657110 PMID:19775298 PMID:19880792 PMID:19966803 PMID:20130576 PMID:20149136 PMID:20179705 PMID:20406486 PMID:20619739 PMID:20736745 PMID:21079152 PMID:21107323 PMID:21263000 PMID:21305640 PMID:21576590 PMID:21729679 PMID:21829508 PMID:22144181 PMID:22407852 PMID:22499344 PMID:22718121 PMID:22761467 PMID:22773810 PMID:22962325 PMID:23076151 PMID:23134356 PMID:23392294 PMID:23400451 PMID:23414587 PMID:23431193 PMID:23515407 PMID:23538902 PMID:23569304 PMID:23614898 PMID:24006476 PMID:24033266 PMID:24148783 PMID:24284627 PMID:24370118 PMID:24671188 PMID:25157968 PMID:25348872 PMID:25695684 PMID:25741868 PMID:26619011 PMID:26821351 PMID:27050078 PMID:27993330 PMID:28098151 PMID:28492532 PMID:28594414 PMID:28780248 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 PMID:15805248 PMID:15930273 PMID:16353168 PMID:16906227 PMID:16930767 PMID:17376864 PMID:17673550 PMID:18371219 PMID:18676830 PMID:18725974 PMID:19029981 PMID:19223544 PMID:19366826 PMID:19513541 PMID:19671852 PMID:19903786 PMID:20177704 PMID:20453058 PMID:20619739 PMID:21078999 PMID:21430269 PMID:21558396 PMID:21824802 PMID:22120714 PMID:22162582 PMID:22162589 PMID:22209294 PMID:22271473 PMID:22357840 PMID:22658544 PMID:22729222 PMID:22729223 PMID:22729224 PMID:22949682 PMID:23066039 PMID:23100325 PMID:23246288 PMID:23408298 PMID:23888070 PMID:24033266 PMID:24265155 PMID:24559322 PMID:24782230 PMID:25157968 PMID:25599672 PMID:25741868 PMID:26266975 PMID:26266985 PMID:26619011 PMID:26822237 PMID:26851524 PMID:27626068 PMID:27631024 PMID:28151489 PMID:28425981 PMID:28492532 PMID:28941273 PMID:29446767 PMID:30543347 PMID:31775759 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 ISO mRNA:increased expression:stomach RGD PMID:11568975 RGD:2315108 NCBI chr 3:171,295,630...171,342,662
Ensembl chr 3:171,294,856...171,342,646
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25228659 PMID:26619011 PMID:29352080 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:25741868 PMID:26168268 PMID:26619011 NCBI chr 1:60,717,386...60,736,629
Ensembl chr 1:60,717,386...60,736,609
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:9467011 PMID:9915974 PMID:10866302 PMID:11504908 PMID:11875759 PMID:16773562 PMID:17526801 PMID:17942903 PMID:18767981 PMID:19457929 PMID:20085938 PMID:20300775 PMID:21659347 PMID:21822720 PMID:21824802 PMID:21828076 PMID:22266152 PMID:22320991 PMID:22327138 PMID:22595938 PMID:23335809 PMID:23399955 PMID:23470840 PMID:24778394 PMID:25157968 PMID:25527629 PMID:25741868 PMID:26619011 PMID:26798346 PMID:27477328 PMID:27535533 PMID:28475857 PMID:28492532 PMID:29359449 PMID:29706350 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 PMID:26822237 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:1760348 PMID:8601312 PMID:10064593 PMID:12077328 PMID:17603482 PMID:17603483 PMID:19568997 PMID:19953625 PMID:20052757 PMID:21440552 PMID:21784453 PMID:22389993 PMID:23312806 PMID:23321623 PMID:23877478 PMID:24033266 PMID:24775816 PMID:25706034 PMID:25741868 PMID:26619011 PMID:28492532 PMID:29084544 PMID:29493581 NCBI chr 4:147,532,040...147,592,769
Ensembl chr 4:147,532,042...147,592,699
JBrowse link
G Rhoa ras homolog family member A ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:26619011 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G RT1-Ba RT1 class II, locus Ba susceptibility ISO associated with Helicobacter Infections;DNA:polymorphism: :HLA-DQA1*0102 (human) RGD PMID:9506344 RGD:127285393 NCBI chr20:4,066,133...4,070,726
Ensembl chr20:4,066,132...4,070,721
JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach ClinVar PMID:6604412 PMID:8898652 PMID:9214508 PMID:9285566 PMID:9582123 PMID:9679244 PMID:9811934 PMID:10479724 PMID:10764709 PMID:10775259 PMID:10797267 PMID:11274206 PMID:11583957 PMID:12116240 PMID:12821112 PMID:14715079 PMID:15014009 PMID:15031030 PMID:15235019 PMID:16613914 PMID:17873119 PMID:17994767 PMID:18823382 PMID:20101697 PMID:22316667 PMID:22331366 PMID:25741868 PMID:26572829 PMID:26619011 PMID:26900293 PMID:27595937 PMID:28492532 PMID:32573726 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Adenocarcinoma of stomach
DNA:missense mutations, loss of heterozygosity:multiple
ClinVar PMID:1349175 PMID:1359493 PMID:1565143 PMID:1565144 PMID:1569604 PMID:1591732 PMID:1631137 PMID:1631151 PMID:1644930 PMID:1673792 PMID:1679237 PMID:1683921 PMID:1686725 PMID:1737852 PMID:1918170 PMID:1978757 PMID:2046748 PMID:2113594 PMID:2259385 PMID:2531845 PMID:2554494 PMID:2826609 PMID:7565304 PMID:7651740 PMID:7707106 PMID:7732013 PMID:7750099 PMID:7783166 PMID:7791795 PMID:7881428 PMID:7887414 PMID:8023157 PMID:8062826 PMID:8080050 PMID:8099841 PMID:8118819 PMID:8164043 PMID:8242631 PMID:8336941 PMID:8364550 PMID:8401536 PMID:8423216 PMID:8425176 PMID:8479749 PMID:8527048 PMID:8550239 PMID:8633021 PMID:8718514 PMID:8825920 PMID:8829627 PMID:8869100 PMID:9020384 PMID:9049183 PMID:9096669 PMID:9157982 PMID:9218725 PMID:9242456 PMID:9290701 PMID:9364015 PMID:9407971 PMID:9472631 PMID:9525742 PMID:9546439 PMID:9569050 PMID:9572492 PMID:9598730 PMID:9627118 PMID:9632751 PMID:9635828 PMID:9662334 PMID:9667734 PMID:9825943 PMID:9839505 PMID:10064694 PMID:10229196 PMID:10366100 PMID:10411893 PMID:10432928 PMID:10519380 PMID:10567903 PMID:10589545 PMID:10616528 PMID:10713666 PMID:10753186 PMID:10761705 PMID:10797439 PMID:10864200 PMID:10871862 PMID:10914716 PMID:10922393 PMID:11051239 PMID:11051241 PMID:11139324 PMID:11180592 PMID:11313981 PMID:11370630 PMID:11429705 PMID:11479205 PMID:11593407 PMID:11782540 PMID:11793474 PMID:11896595 PMID:11920788 PMID:11920959 PMID:12007217 PMID:12034820 PMID:12076704 PMID:12124823 PMID:12406399 PMID:12509279 PMID:12672316 PMID:12695689 PMID:12700230 PMID:12726864 PMID:12792784 PMID:12826609 PMID:12885464 PMID:12901974 PMID:12909720 PMID:12917626 PMID:14559903 PMID:14673037 PMID:15004724 PMID:15017592 PMID:15037740 PMID:15161705 PMID:15381368 PMID:15390294 PMID:15580553 PMID:15607980 PMID:15607981 PMID:15722483 PMID:15781620 PMID:15825182 PMID:15850016 PMID:15925506 PMID:15951970 PMID:15977174 PMID:15982667 PMID:16209708 PMID:16288208 PMID:16337994 PMID:16401470 PMID:16474844 PMID:16489069 PMID:16494995 PMID:16508005 PMID:16551709 PMID:16633321 PMID:16682957 PMID:16736287 PMID:16741917 PMID:16778209 PMID:16818505 PMID:16827139 PMID:16861262 PMID:17015838 PMID:17170001 PMID:17311302 PMID:17390010 PMID:17401428 PMID:17417627 PMID:17427234 PMID:17530187 PMID:17540308 PMID:17541742 PMID:17567834 PMID:17572079 PMID:17606709 PMID:17636407 PMID:17724467 PMID:17875924 PMID:18208484 PMID:18307025 PMID:18453682 PMID:18511570 PMID:18555592 PMID:18628487 PMID:18685109 PMID:18989156 PMID:19012332 PMID:19101993 PMID:19171880 PMID:19336573 PMID:19367569 PMID:19378321 PMID:19405127 PMID:19462533 PMID:19468865 PMID:19556618 PMID:19681600 PMID:19834951 PMID:19850740 PMID:19913028 PMID:19930417 PMID:20013323 PMID:20028212 PMID:20113312 PMID:20118236 PMID:20127978 PMID:20128691 PMID:20234365 PMID:20308654 PMID:20407015 PMID:20505364 PMID:20506564 PMID:20516128 PMID:20522432 PMID:20593220 PMID:20693561 PMID:20805372 PMID:20878954 PMID:20972454 PMID:21056685 PMID:21059199 PMID:21115975 PMID:21187651 PMID:21232794 PMID:21305319 PMID:21319261 PMID:21343334 PMID:21356188 PMID:21470402 PMID:21483000 PMID:21484931 PMID:21514416 PMID:21519010 PMID:21535297 PMID:21552135 PMID:21601526 PMID:21626334 PMID:21674059 PMID:21747090 PMID:21761402 PMID:22006311 PMID:22052707 PMID:22090360 PMID:22110706 PMID:22114072 PMID:22186996 PMID:22233476 PMID:22265402 PMID:22319594 PMID:22427690 PMID:22540896 PMID:22672556 PMID:22710932 PMID:22713868 PMID:22768918 PMID:22811390 PMID:22844452 PMID:22847613 PMID:22862161 PMID:22866089 PMID:22899716 PMID:22915647 PMID:22919068 PMID:22923379 PMID:22983585 PMID:22999923 PMID:23161690 PMID:23165212 PMID:23172776 PMID:23175693 PMID:23246812 PMID:23259501 PMID:23263379 PMID:23265383 PMID:23315175 PMID:23334668 PMID:23406775 PMID:23538418 PMID:23625637 PMID:23630318 PMID:23667202 PMID:23713777 PMID:23792586 PMID:23894400 PMID:23950206 PMID:23967324 PMID:24033266 PMID:24038938 PMID:24122735 PMID:24307375 PMID:24381225 PMID:24384472 PMID:24395441 PMID:24487413 PMID:24501221 PMID:24573247 PMID:24590827 PMID:24603336 PMID:24641375 PMID:24651012 PMID:24651015 PMID:24677579 PMID:24702488 PMID:24728327 PMID:24744791 PMID:24763289 PMID:24766216 PMID:24810334 PMID:24835218 PMID:24940547 PMID:25119136 PMID:25157968 PMID:25293557 PMID:25294809 PMID:25339994 PMID:25433984 PMID:25503501 PMID:25504633 PMID:25525159 PMID:25584008 PMID:25587027 PMID:25619955 PMID:25634208 PMID:25691460 PMID:25741868 PMID:25787918 PMID:25896519 PMID:25925845 PMID:25927356 PMID:25945745 PMID:25952993 PMID:25980754 PMID:26014290 PMID:26022348 PMID:26024390 PMID:26205489 PMID:26225655 PMID:26230955 PMID:26270727 PMID:26271412 PMID:26425688 PMID:26467025 PMID:26497680 PMID:26534844 PMID:26554828 PMID:26556299 PMID:26585234 PMID:26619011 PMID:26628864 PMID:26659639 PMID:26681312 PMID:26781615 PMID:26786923 PMID:26787237 PMID:26818906 PMID:26822237 PMID:26845104 PMID:26878390 PMID:26911350 PMID:26976419 PMID:27022024 PMID:27077130 PMID:27149858 PMID:27179933 PMID:27276561 PMID:27276934 PMID:27374712 PMID:27458004 PMID:27463065 PMID:27489289 PMID:27493922 PMID:27501770 PMID:27533082 PMID:27616075 PMID:27621308 PMID:27622479 PMID:27680515 PMID:27683180 PMID:27714481 PMID:27724982 PMID:27730344 PMID:27873457 PMID:27895058 PMID:27911860 PMID:27959731 PMID:28135145 PMID:28152038 PMID:28369373 PMID:28453743 PMID:28472496 PMID:28476805 PMID:28477316 PMID:28492532 PMID:28724667 PMID:28776571 PMID:28802053 PMID:28861920 PMID:28873162 PMID:28915717 PMID:28975465 PMID:29025599 PMID:29070607 PMID:29126202 PMID:29324801 PMID:29470806 PMID:29478780 PMID:29489754 PMID:29581140 PMID:29752822 PMID:29753700 PMID:29979965 PMID:30076369 PMID:30128536 PMID:30216591 PMID:30224644 PMID:30299350 PMID:30306255 PMID:30311369 PMID:30318520 PMID:30327374 PMID:30352134 PMID:30450585 PMID:30630526 PMID:30675318 PMID:30709381 PMID:30720243 PMID:30816478 PMID:30840781 PMID:30918304 PMID:31016814 PMID:31050713 PMID:31121848 PMID:31206626 PMID:31300551 PMID:31775759 PMID:32000721 PMID:32295079 PMID:32401780, PMID:30554333 RGD:14995496 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
Gastric Adenocarcinoma and Proximal Polyposis of the Stomach term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Gastric adenocarcinoma and proximal polyposis of the stomach OMIM
ClinVar
PMID:21813476 PMID:22027476 PMID:27087319 PMID:27343414 PMID:28492532 PMID:29112017 PMID:29141268 PMID:29968043 PMID:31409086 PMID:33242120 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
gastric body carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:20127025 RGD:9589084 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
gastric cardia adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin disease_progression ISO RGD PMID:15585392 RGD:11035298 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
hereditary diffuse gastric cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 ISO ClinVar Annotator: match by term: Hereditary diffuse gastric cancer ClinVar
OMIM
PMID:2317870 PMID:2449335 PMID:8033105 PMID:8075649 PMID:8127895 PMID:8557030 PMID:9268661 PMID:9536098 PMID:9537325 PMID:9744472 PMID:9751616 PMID:10037790 PMID:10072428 PMID:10094558 PMID:10211998 PMID:10319582 PMID:10357799 PMID:10433926 PMID:10439038 PMID:10477433 PMID:10830618 PMID:10896919 PMID:10973239 PMID:11104024 PMID:11196175 PMID:11241409 PMID:11305955 PMID:11313896 PMID:11332401 PMID:11419427 PMID:11443625 PMID:11598162 PMID:11665720 PMID:11705864 PMID:11747475 PMID:11857408 PMID:11948460 PMID:11968083 PMID:11968084 PMID:11996968 PMID:12096341 PMID:12216071 PMID:12414534 PMID:12532420 PMID:12588804 PMID:12647996 PMID:12800196 PMID:12944922 PMID:14033926 PMID:14158754 PMID:14500541 PMID:14562278 PMID:14961571 PMID:15138207 PMID:15173255 PMID:15235021 PMID:15288293 PMID:15322508 PMID:15457549 PMID:15735979 PMID:15750927 PMID:15780560 PMID:15831593 PMID:16061854 PMID:16112667 PMID:16189707 PMID:16199547 PMID:16501831 PMID:16527687 PMID:16787116 PMID:16801346 PMID:16924464 PMID:16929514 PMID:16997156 PMID:17126523 PMID:17221870 PMID:17224074 PMID:17261850 PMID:17434710 PMID:17510211 PMID:17522512 PMID:17545690 PMID:17576681 PMID:17634464 PMID:17660459 PMID:17668349 PMID:17955726 PMID:17979184 PMID:18035404 PMID:18046629 PMID:18391748 PMID:18427545 PMID:18442100 PMID:18491227 PMID:18726070 PMID:18772194 PMID:18788075 PMID:19011631 PMID:19017792 PMID:19139070 PMID:19168852 PMID:19223545 PMID:19247957 PMID:19268661 PMID:19269290 PMID:19408054 PMID:19725995 PMID:19965908 PMID:20066110 PMID:20233471 PMID:20371349 PMID:20373070 PMID:20624523 PMID:20719348 PMID:20824432 PMID:20921021 PMID:21106365 PMID:21271559 PMID:21331337 PMID:21424370 PMID:21432908 PMID:21459793 PMID:21520333 PMID:21681551 PMID:21696387 PMID:21777349 PMID:21876083 PMID:21989054 PMID:22006311 PMID:22020549 PMID:22098830 PMID:22118538 PMID:22152101 PMID:22225527 PMID:22252131 PMID:22470475 PMID:22543498 PMID:22703879 PMID:22722829 PMID:22722839 PMID:22723466 PMID:22752307 PMID:22788692 PMID:22799331 PMID:22850631 PMID:22901170 PMID:22911296 PMID:22941188 PMID:23073328 PMID:23124477 PMID:23197654 PMID:23264079 PMID:23290073 PMID:23425907 PMID:23431106 PMID:23435907 PMID:23555086 PMID:23575477 PMID:23709761 PMID:23713947 PMID:23752020 PMID:24033266 PMID:24037103 PMID:24055113 PMID:24204729 PMID:24326041 PMID:24366306 PMID:24373500 PMID:24389957 PMID:24424122 PMID:24493355 PMID:24556621 PMID:24690483 PMID:24728327 PMID:24755471 PMID:24763289 PMID:24784840 PMID:24817184 PMID:24969172 PMID:25067988 PMID:25123297 PMID:25142776 PMID:25180051 PMID:25186627 PMID:25187893 PMID:25231023 PMID:25275298 PMID:25315765 PMID:25318351 PMID:25326637 PMID:25344691 PMID:25388006 PMID:25525159 PMID:25593300 PMID:25637381 PMID:25640679 PMID:25648022 PMID:25741868 PMID:25771876 PMID:25819062 PMID:25856671 PMID:25862857 PMID:25882375 PMID:25927356 PMID:25980754 PMID:26010451 PMID:26022348 PMID:26025002 PMID:26072394 PMID:26086041 PMID:26123647 PMID:26182300 PMID:26206375 PMID:26270727 PMID:26296696 PMID:26467025 PMID:26483394 PMID:26486520 PMID:26517685 PMID:26534844 PMID:26556299 PMID:26580448 PMID:26601054 PMID:26643573 PMID:26674224 PMID:26681312 PMID:26689913 PMID:26692440 PMID:26707089 PMID:26757417 PMID:26759166 PMID:26822949 PMID:26845104 PMID:26893459 PMID:26898890 PMID:26901067 PMID:26911350 PMID:26976419 PMID:27064202 PMID:27121310 PMID:27146957 PMID:27151223 PMID:27153395 PMID:27192129 PMID:27227907 PMID:27276934 PMID:27284491 PMID:27392081 PMID:27443514 PMID:27477802 PMID:27498913 PMID:27512640 PMID:27582386 PMID:27616075 PMID:27621404 PMID:27624909 PMID:27682646 PMID:27720647 PMID:27730413 PMID:27752808 PMID:27760322 PMID:27824116 PMID:27878467 PMID:27880784 PMID:27904775 PMID:27925203 PMID:27930734 PMID:27978560 PMID:27995193 PMID:28125075 PMID:28135145 PMID:28166811 PMID:28195815 PMID:28202063 PMID:28301459 PMID:28301460 PMID:28352678 PMID:28460635 PMID:28492532 PMID:28503720 PMID:28522256 PMID:28522829 PMID:28580595 PMID:28608266 PMID:28640387 PMID:28649662 PMID:28688938 PMID:28699883 PMID:28767289 PMID:28873162 PMID:28944238 PMID:28961279 PMID:28975465 PMID:28993866 PMID:29016666 PMID:29025585 PMID:29050249 PMID:29131691 PMID:29156750 PMID:29212164 PMID:29231860 PMID:29263802 PMID:29295527 PMID:29338689 PMID:29348693 PMID:29368341 PMID:29371908 PMID:29416795 PMID:29431110 PMID:29454568 PMID:29470806 PMID:29511593 PMID:29522266 PMID:29577179 PMID:29589180 PMID:29641532 PMID:29752822 PMID:29769627 PMID:29785153 PMID:29798843 PMID:29805042 PMID:29926297 PMID:30007404 PMID:30014492 PMID:30089731 PMID:30093976 PMID:30264118 PMID:30287823 PMID:30306255 PMID:30306390 PMID:30311375 PMID:30333958 PMID:30374176 PMID:30426508 PMID:30542785 PMID:30563991 PMID:30661051 PMID:30716324 PMID:30745422 PMID:30895400 PMID:30935944 PMID:31077828 PMID:31159747 PMID:31206626 PMID:31296550 PMID:31422574 PMID:31514334 PMID:31642931 PMID:31780696 PMID:31815095 PMID:31843900 PMID:32107087 PMID:32147272 PMID:32241597 PMID:32260281 PMID:32566746 PMID:32658311 PMID:32770675 PMID:33471991 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Il1b interleukin 1 beta ISO OMIM NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO OMIM NCBI chr 3:1,449,778...1,468,624
Ensembl chr 3:1,452,644...1,468,614
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Hereditary diffuse gastric cancer OMIM
ClinVar
PMID:12110640 PMID:14982869 PMID:17056636 PMID:17324647 PMID:18628094 PMID:20949621 PMID:24033266 PMID:24803665 PMID:25741868 PMID:28492532 PMID:29948256 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
linitis plastica term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psca prostate stem cell antigen ISO CTD Direct Evidence: marker/mechanism CTD PMID:18488030 NCBI chr 7:116,090,189...116,091,955
Ensembl chr 7:116,090,189...116,091,955
JBrowse link
stomach carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A disease_progression ISO protein:decreased expression:stomach (human) RGD PMID:24767857 RGD:125097484 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 ISO RGD PMID:23722107 RGD:14700649 NCBI chr 7:77,678,853...77,716,658
Ensembl chr 7:77,678,968...77,716,408
JBrowse link
G Bcl2l10 BCL2 like 10 ISO protein:decreased expression:stomach: RGD PMID:21171085, PMID:21171085 RGD:14392807, RGD:14392807 NCBI chr 8:82,288,705...82,294,750
Ensembl chr 8:82,288,705...82,294,744
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 IEP protein:increased expression:stomach RGD PMID:12854136 RGD:2293138 NCBI chr10:106,856,097...106,864,419
Ensembl chr10:106,856,097...106,864,413
JBrowse link
G Brca1 BRCA1, DNA repair associated disease_progression ISO RGD PMID:23569343 RGD:9589059 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Cbx7 chromobox 7 ISO mRNA:decreased expression:stomach: RGD PMID:22041561 RGD:9587355 NCBI chr 7:121,136,067...121,153,503
Ensembl chr 7:121,136,058...121,153,383
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A disease_progression ISO RGD PMID:11745255 RGD:8662389 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 disease_progression ISO RGD PMID:21709195 RGD:126781768 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 disease_progression ISO RGD PMID:21709195 RGD:126781768 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 disease_progression ISO RGD PMID:21709195 RGD:126781768 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Kdm4a lysine demethylase 4A severity ISO mRNA, protein:increased expression:gastric mucosa (human) RGD PMID:24802408 RGD:9587437 NCBI chr 5:136,967,650...137,014,402
Ensembl chr 5:136,967,650...137,014,430
JBrowse link
G Kdm4c lysine demethylase 4C severity ISO protein:increased expression:stomach (human) RGD PMID:24418035 RGD:9588260 NCBI chr 5:90,800,139...91,012,662
Ensembl chr 5:90,800,082...91,012,659
JBrowse link
G Kdm5a lysine demethylase 5A ISO mRNA:increased expression:stomach (human) RGD PMID:23794145 RGD:9588529 NCBI chr 4:152,892,388...152,972,196
Ensembl chr 4:152,892,388...152,972,201
JBrowse link
G Kmt2c lysine methyltransferase 2C severity ISO protein:decreased expression:stomach (human) RGD PMID:25222251 RGD:9588234 NCBI chr 4:82,506...109,986
NCBI chr 4:6,083,650...6,294,413
Ensembl chr 4:6,083,736...6,292,516
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO gastric cancer, OMIM:137215 RGD PMID:7773929 RGD:1600468 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Letmd1 LETM1 domain containing 1 ISO mRNA, protein:increased expression:stomach RGD PMID:12879013 RGD:2314918 NCBI chr 7:142,106,364...142,119,900
Ensembl chr 7:142,106,465...142,119,899
JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 severity ISO protein:decreased expression:stomach (human) RGD PMID:23569343 RGD:9589059 NCBI chr20:3,405,017...3,419,831
Ensembl chr20:3,404,711...3,419,831
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO mRNA:increased expression:gastric mucosa (human) RGD PMID:20944126 RGD:7206857 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP mRNA, protein:increased expression, increased activity:stomach RGD PMID:20434464 RGD:2325777 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP mRNA, protein:increased expression, increased activity:stomach RGD PMID:20434464 RGD:2325777 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO DNA:deletions:intron:IVS4_delT (human) RGD PMID:15319296 RGD:2317738 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Mutyh mutY DNA glycosylase ISO RGD PMID:15273732 RGD:1600201 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 susceptibility ISO DNA:snp:cds:p.V762A rs1136410 (human) RGD PMID:18716896 RGD:5683907 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP mRNA:increased expression:stomach mucosa RGD PMID:12359048 RGD:2300058 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 severity ISO mRNA:decreased expression:stomach (human) RGD PMID:16273651 RGD:1581312 NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17147
    disease of anatomical entity 16492
      gastrointestinal system disease 6058
        stomach disease 914
          Stomach Neoplasms 406
            stomach cancer 139
              cardia cancer + 2
              diffuse gastric cancer + 4
              gastric fundus cancer + 0
              gastric gastrinoma 0
              gastric leiomyosarcoma 0
              gastric liposarcoma 0
              gastric lymphoma 0
              gastric teratoma + 0
              malignant gastric germ cell tumor + 0
              malignant gastric granular cell tumor 0
              pylorus cancer + 0
              stomach carcinoma + 70
Path 2
Term Annotations click to browse term
  disease 17147
    disease of anatomical entity 16492
      gastrointestinal system disease 6058
        Gastrointestinal Diseases 4142
          Gastrointestinal Neoplasms 3303
            gastrointestinal system cancer 2518
              stomach cancer 139
                cardia cancer + 2
                diffuse gastric cancer + 4
                gastric fundus cancer + 0
                gastric gastrinoma 0
                gastric leiomyosarcoma 0
                gastric liposarcoma 0
                gastric lymphoma 0
                gastric teratoma + 0
                malignant gastric germ cell tumor + 0
                malignant gastric granular cell tumor 0
                pylorus cancer + 0
                stomach carcinoma + 70
paths to the root