RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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ACE
angiotensin I converting enzyme
ISO
protein:increased activity:lung (rat)
RGD
PMID:9498404
RGD:12859277
NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
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AGTR2
angiotensin II receptor type 2
ISO
RGD
PMID:22113494
RGD:6903875
NCBI chr X:116,170,744...116,174,974
Ensembl chr X:116,170,744...116,174,974
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ATP7A
ATPase copper transporting alpha
ISO
mRNA, protein:decreased expression:diaphragm (rat)
RGD
PMID:25319798
RGD:11341670
NCBI chr X:77,910,693...78,050,395
Ensembl chr X:77,910,656...78,050,395
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BMP4
bone morphogenetic protein 4
ISO
mRNA:decreased expression:heart:
RGD
PMID:18280291
RGD:9068407
NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
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CBL
Cbl proto-oncogene
ISO
mRNA,protein:decreased expression, hypophosphorylation:lung, alveolar epithelium:
RGD
PMID:23143077
RGD:11038813
NCBI chr11:119,206,339...119,308,149
Ensembl chr11:119,206,298...119,313,926 Ensembl chr11:119,206,298...119,313,926
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CCL2
C-C motif chemokine ligand 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:30418988
NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,218...34,257,203
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CCN2
cellular communication network factor 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:20939759 PMID:21258935
NCBI chr 6:131,948,176...131,951,372
Ensembl chr 6:131,948,176...131,951,372
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CDK8
cyclin dependent kinase 8
IAGP
ClinVar Annotator: match by term: DIH
ClinVar
PMID:25741868
NCBI chr13:26,254,125...26,405,238
Ensembl chr13:26,254,104...26,405,238
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COL1A1
collagen type I alpha 1 chain
IAGP
ClinVar Annotator: match by term: Agenesis of hemidiaphragm
ClinVar
PMID:25741868 PMID:30311386
NCBI chr17:50,184,096...50,201,649
Ensembl chr17:50,183,289...50,201,632 Ensembl chr17:50,183,289...50,201,632
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DES
desmin
EXP IAGP
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Congenital diaphragmatic hernia
CTD ClinVar
PMID:14724127 PMID:15477095 PMID:16217025 PMID:16519886 PMID:16828798 PMID:16865695 PMID:17325244 PMID:17626518 PMID:20474083 PMID:21842594 PMID:22215463 PMID:23143191 PMID:23168288 PMID:23806086 PMID:23861362 PMID:24033266 PMID:24088041 PMID:25214167 PMID:25736269 PMID:25741868 PMID:26467025 PMID:27651373 PMID:28492532
NCBI chr 2:219,418,377...219,426,734
Ensembl chr 2:219,418,377...219,426,734
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ELN
elastin
ISO
mRNA,protein:increased expression:lung:
RGD
PMID:12194112
RGD:9585688
NCBI chr 7:74,027,772...74,069,907
Ensembl chr 7:74,027,789...74,069,907
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EP300
E1A binding protein p300
ISO
mRNA:decreased expression:lung
RGD
PMID:24488106
RGD:9588310
NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,592...41,180,077
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EPO
erythropoietin
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:27880037
NCBI chr 7:100,720,468...100,723,700
Ensembl chr 7:100,720,468...100,723,700
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FBN1
fibrillin 1
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:23806086 PMID:24088041 PMID:25736269
NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,306...48,645,849 Ensembl chr15:48,408,306...48,645,849
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FGFRL1
fibroblast growth factor receptor like 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:20938900
NCBI chr 4:1,009,930...1,026,898
Ensembl chr 4:1,009,936...1,026,898
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FOXC2
forkhead box C2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:27663689
NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
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FOXF1
forkhead box F1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:27663689
NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422
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FRAS1
Fraser extracellular matrix complex subunit 1
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:25741868 PMID:28492532
NCBI chr 4:78,057,323...78,544,269
Ensembl chr 4:78,057,323...78,544,269
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FREM1
FRAS1 related extracellular matrix 1
IAGP EXP ISO
DNA:deletion, frame shift:cds, splice junction: ClinVar Annotator: match by term: Congenital diaphragmatic hernia CTD Direct Evidence: marker/mechanism mRNA,protein:decreased expression:diaphragm:
ClinVar CTD
PMID:23221805 PMID:23806086 PMID:24088041 PMID:25736269 PMID:25741868 PMID:26382659 , PMID:23221805 , PMID:26382659 , PMID:23221805
RGD:11554181 , RGD:11554195 , RGD:11554181
NCBI chr 9:14,734,666...14,911,653
Ensembl chr 9:14,734,666...14,910,995 Ensembl chr 9:14,734,666...14,910,995
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FREM2
FRAS1 related extracellular matrix 2
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:25741868 PMID:28492532
NCBI chr13:38,687,041...38,887,131
Ensembl chr13:38,687,077...38,887,131
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GATA4
GATA binding protein 4
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:23426975
NCBI chr 8:11,676,931...11,760,002
Ensembl chr 8:11,676,959...11,760,002
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GATA6
GATA binding protein 6
ISO IAGP
mRNA:decreased expression:heart (rat) ClinVar Annotator: match by term: DIH ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:22158542 PMID:24385578 , PMID:18280291
RGD:9068407
NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528 Ensembl chr18:22,169,589...22,202,528
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GLI3
GLI family zinc finger 3
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,237,870 Ensembl chr 7:41,960,949...42,237,870
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IGF1
insulin like growth factor 1
ISO
mRNA:decreased expression:heart (rat)
RGD
PMID:11409163
RGD:12904929
NCBI chr12:102,395,860...102,481,839
Ensembl chr12:102,395,874...102,481,744
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IGF1R
insulin like growth factor 1 receptor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:20620343 PMID:21433279
NCBI chr15:98,648,539...98,964,530
Ensembl chr15:98,648,539...98,964,530
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IGF2
insulin like growth factor 2
treatment
ISO
RGD
PMID:24352370
RGD:10402563
NCBI chr11:2,129,112...2,149,603
Ensembl chr11:2,129,112...2,141,238
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IGF2R
insulin like growth factor 2 receptor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:20620343 PMID:21433279
NCBI chr 6:159,969,082...160,111,504
Ensembl chr 6:159,969,082...160,113,507 Ensembl chr 6:159,969,082...160,113,507
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IGFBP3
insulin like growth factor binding protein 3
ISO
RGD
PMID:19844724
RGD:10402761
NCBI chr 7:45,912,245...45,921,272
Ensembl chr 7:45,912,245...45,921,874
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IGFBP5
insulin like growth factor binding protein 5
ISO
RGD
PMID:19844724
RGD:10402761
NCBI chr 2:216,672,105...216,695,549
Ensembl chr 2:216,672,105...216,695,549
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INSR
insulin receptor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:21433279
NCBI chr19:7,112,257...7,294,414
Ensembl chr19:7,112,255...7,294,414
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KCNQ5
potassium voltage-gated channel subfamily Q member 5
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:28189443
NCBI chr 6:72,621,843...73,198,853
Ensembl chr 6:72,621,792...73,198,851 Ensembl chr 6:72,621,792...73,198,851
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KIF7
kinesin family member 7
ISO ISS
mRNA,protein:decreased expression:diaphragmatic mesenchyme, pulmonary mesenchyme; OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
PMID:25921351
RGD:11553839
NCBI chr15:89,627,977...89,663,086
Ensembl chr15:89,608,789...89,655,467
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LRP1
LDL receptor related protein 1
ISS
OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
NCBI chr12:57,128,401...57,213,377
Ensembl chr12:57,128,483...57,213,361
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LZTR1
leucine zipper like transcription regulator 1
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:25741868
NCBI chr22:20,982,297...20,999,032
Ensembl chr22:20,982,269...20,999,032
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MET
MET proto-oncogene, receptor tyrosine kinase
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:1104268 PMID:14559814 PMID:17483355 PMID:21970370 PMID:22703879 PMID:23806086 PMID:24088041 PMID:24728327 PMID:25605252 PMID:25736269 PMID:25741868 PMID:25859546 PMID:26467025 PMID:28492532
NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,386 Ensembl chr 7:116,672,196...116,798,386
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MN1
MN1 proto-oncogene, transcriptional regulator
IAGP
ClinVar Annotator: match by term: DIH
ClinVar
PMID:25741868 PMID:31834374
NCBI chr22:27,748,277...27,801,756
Ensembl chr22:27,748,277...27,801,756
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MYOD1
myogenic differentiation 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:21258934
NCBI chr11:17,719,571...17,722,136
Ensembl chr11:17,719,571...17,722,136
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NDST1
N-deacetylase and N-sulfotransferase 1
ISS
OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
NCBI chr 5:150,497,779...150,558,211
Ensembl chr 5:150,485,818...150,558,211
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NOS3
nitric oxide synthase 3
ISO
protein:decreased expression:pulmonary artery (rat)
RGD
PMID:29216632
RGD:13504720
NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588
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NR2F2
nuclear receptor subfamily 2 group F member 2
ISS
OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
NCBI chr15:96,326,046...96,340,263
Ensembl chr15:96,325,938...96,340,263
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PAX3
paired box 3
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
PMID:8589691 PMID:8863157 PMID:9584079 PMID:9856573 PMID:23806086 PMID:24033266 PMID:24088041 PMID:25736269 PMID:25741868 PMID:26467025 PMID:29407415
NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,888...222,298,996 Ensembl chr 2:222,199,888...222,298,996
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PDGFRA
platelet derived growth factor receptor alpha
ISS
OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
NCBI chr 4:54,229,127...54,298,245
Ensembl chr 4:54,229,280...54,298,245
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PIM1
Pim-1 proto-oncogene, serine/threonine kinase
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:25812446
NCBI chr 6:37,170,152...37,175,428
Ensembl chr 6:37,170,152...37,175,428
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RHOA
ras homolog family member A
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:25783350
NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,145...49,412,998 Ensembl chr 3:49,359,145...49,412,998
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ROBO4
roundabout guidance receptor 4
IAGP
ClinVar Annotator: match by term: Congenital diaphragmatic hernia
ClinVar
NCBI chr11:124,883,691...124,897,865
Ensembl chr11:124,883,691...124,898,500
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SLIT3
slit guidance ligand 3
ISS
OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
NCBI chr 5:168,661,740...169,301,139
Ensembl chr 5:168,661,733...169,301,129 Ensembl chr 5:168,661,733...169,301,129
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SOD1
superoxide dismutase 1
ISO
mRNA:decreased expression:lung
RGD
PMID:26534761
RGD:11035301
NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,622...31,668,931 Ensembl chr21:31,659,622...31,668,931
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SOD2
superoxide dismutase 2
ISO
mRNA:decreased expression:lung
RGD
PMID:26534761
RGD:11035301
NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529 Ensembl chr 6:159,669,069...159,762,529 Ensembl chr 6:159,669,069...159,762,529
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SOX7
SRY-box transcription factor 7
ISS
OMIM:142340 | OMIM:222400 | OMIM:610187
MouseDO
NCBI chr 8:10,723,768...10,730,511
Ensembl chr 8:10,723,768...10,730,511
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STAT3
signal transducer and activator of transcription 3
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:25812446
NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,482 Ensembl chr17:42,313,324...42,388,482 Ensembl chr17:42,313,324...42,388,482
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TNF
tumor necrosis factor
ISO
RGD
PMID:10541330
RGD:12904053
NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
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VEGFA
vascular endothelial growth factor A
ISO
protein:decreased expression:lung:
RGD
PMID:15879288
RGD:7421593
NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
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WDR26
WD repeat domain 26
IAGP
ClinVar Annotator: match by term: Agenesis of hemidiaphragm
ClinVar
PMID:30311386
NCBI chr 1:224,385,146...224,434,797
Ensembl chr 1:224,385,143...224,437,033 Ensembl chr 1:224,385,143...224,437,033
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WNT11
Wnt family member 11
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:25783350
NCBI chr11:76,186,325...76,210,842
Ensembl chr11:76,186,325...76,210,736
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WT1
WT1 transcription factor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:21072664
NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564 Ensembl chr11:32,387,775...32,435,564
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ZFPM2
zinc finger protein, FOG family member 2
IEA IAGP ISS
OMIM:142340 | OMIM:222400 | OMIM:610187 ClinVar Annotator: match by term: Agenesis of hemidiaphragm
MouseDO ClinVar
PMID:30311386
NCBI chr 8:105,318,438...105,804,539
Ensembl chr 8:104,590,733...105,804,539
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ZFPM2-AS1
ZFPM2 antisense RNA 1
IAGP
ClinVar Annotator: match by term: Agenesis of hemidiaphragm
ClinVar
PMID:30311386
NCBI chr 8:105,780,410...106,060,503
Ensembl chr 8:105,546,089...106,060,524
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PIK3CA
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
IAGP
ClinVar Annotator: match by term: Diaphragmatic eventration
ClinVar
PMID:25741868 PMID:26619011 PMID:27631024 PMID:28492532 PMID:31568861
NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
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AGT
angiotensinogen
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:16292651
NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,702,523...230,714,122
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AGTR1
angiotensin II receptor type 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:16292651
NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
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AQP5
aquaporin 5
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17245593 PMID:17270560
NCBI chr12:49,961,855...49,965,682
Ensembl chr12:49,961,872...49,965,682
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BMP4
bone morphogenetic protein 4
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18280291
NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
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CDK8
cyclin dependent kinase 8
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia
ClinVar
PMID:25741868
NCBI chr13:26,254,125...26,405,238
Ensembl chr13:26,254,104...26,405,238
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CFTR
CF transmembrane conductance regulator
EXP
CTD Direct Evidence: therapeutic
CTD
PMID:16473863
NCBI chr 7:117,480,025...117,668,665
Ensembl chr 7:117,287,120...117,715,971 Ensembl chr 7:117,287,120...117,715,971
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COL1A1
collagen type I alpha 1 chain
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia
ClinVar
PMID:25741868 PMID:30311386
NCBI chr17:50,184,096...50,201,649
Ensembl chr17:50,183,289...50,201,632 Ensembl chr17:50,183,289...50,201,632
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EDN1
endothelin 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:9473106 PMID:10693666
NCBI chr 6:12,256,463...12,297,194
Ensembl chr 6:12,290,361...12,297,194
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EDNRA
endothelin receptor type A
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:9473106 PMID:10693666
NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
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EDNRB
endothelin receptor type B
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10693666
NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
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ELN
elastin
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10359170
NCBI chr 7:74,027,772...74,069,907
Ensembl chr 7:74,027,789...74,069,907
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FGF18
fibroblast growth factor 18
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17303798
NCBI chr 5:171,419,647...171,457,626
Ensembl chr 5:171,419,647...171,457,626
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FGF2
fibroblast growth factor 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10646786
NCBI chr 4:122,826,708...122,898,236
Ensembl chr 4:122,826,708...122,898,236
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FOXA2
forkhead box A2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:16863852
NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,581,005...22,585,455 Ensembl chr20:22,581,005...22,585,455
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GATA4
GATA binding protein 4
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18280291
NCBI chr 8:11,676,931...11,760,002
Ensembl chr 8:11,676,959...11,760,002
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GATA6
GATA binding protein 6
IAGP EXP
ClinVar Annotator: match by term: Diaphragmatic hernia CTD Direct Evidence: marker/mechanism
ClinVar CTD
PMID:18280291 PMID:22158542 PMID:24385578
NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528 Ensembl chr18:22,169,589...22,202,528
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GJA1
gap junction protein alpha 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:16292552 PMID:16720372
NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
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HOXA5
homeobox A5
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18351244
NCBI chr 7:27,141,052...27,143,681
Ensembl chr 7:27,141,052...27,143,681
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HOXB3
homeobox B3
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18351244
NCBI chr17:48,548,870...48,590,241
Ensembl chr17:48,548,870...48,604,912
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ICAM1
intercellular adhesion molecule 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:12759764 PMID:17245593
NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
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IGF1
insulin like growth factor 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10370016
NCBI chr12:102,395,860...102,481,839
Ensembl chr12:102,395,874...102,481,744
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IGF2
insulin like growth factor 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10370016
NCBI chr11:2,129,112...2,149,603
Ensembl chr11:2,129,112...2,141,238
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IL6
interleukin 6
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18500730
NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
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KCNA2
potassium voltage-gated channel subfamily A member 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15088113
NCBI chr 1:110,593,580...110,631,536
Ensembl chr 1:110,519,837...110,631,474
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KCNB1
potassium voltage-gated channel subfamily B member 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15088113
NCBI chr20:49,363,877...49,484,033
Ensembl chr20:49,293,394...49,484,297
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KCNMA1
potassium calcium-activated channel subfamily M alpha 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15088113
NCBI chr10:76,869,602...77,637,969
Ensembl chr10:76,869,601...77,638,369
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LRP2
LDL receptor related protein 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17632512
NCBI chr 2:169,127,109...169,362,597
Ensembl chr 2:169,127,109...169,362,534
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MN1
MN1 proto-oncogene, transcriptional regulator
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia
ClinVar
PMID:25741868 PMID:31834374
NCBI chr22:27,748,277...27,801,756
Ensembl chr22:27,748,277...27,801,756
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MYOD1
myogenic differentiation 1
ISO
mRNA:decreased expression:diaphragm
RGD
PMID:21258934
RGD:9686080
NCBI chr11:17,719,571...17,722,136
Ensembl chr11:17,719,571...17,722,136
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NKX2-1
NK2 homeobox 1
ISO EXP
mRNA, protein:increased expression:lung CTD Direct Evidence: marker/mechanism
CTD
PMID:10830305 PMID:16863852 , PMID:17245593
RGD:1600158
NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
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NOS3
nitric oxide synthase 3
ISO EXP
mRNA, protein:decreased expression:lung CTD Direct Evidence: marker/mechanism
CTD
PMID:7576705 PMID:8863223 , PMID:7576705
RGD:5132862
NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588
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NPPA
natriuretic peptide A
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:11584395
NCBI chr 1:11,845,709...11,847,783
Ensembl chr 1:11,845,709...11,848,345
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NR2F2
nuclear receptor subfamily 2 group F member 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17436238
NCBI chr15:96,326,046...96,340,263
Ensembl chr15:96,325,938...96,340,263
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PAX3
paired box 3
ISO
mRNA:decreased expression:heart (rat)
RGD
PMID:15616818
RGD:1580942
NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,888...222,298,996 Ensembl chr 2:222,199,888...222,298,996
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RXRA
retinoid X receptor alpha
ISO
mRNA:increased expression:lung
RGD
PMID:17270546
RGD:1643107
NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
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SFTPB
surfactant protein B
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10830305 PMID:16863852
NCBI chr 2:85,657,307...85,668,741
Ensembl chr 2:85,657,314...85,668,741
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SFTPC
surfactant protein C
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10751355
NCBI chr 8:22,157,383...22,164,479
Ensembl chr 8:22,156,913...22,164,479
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SLIT3
slit guidance ligand 3
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17436238
NCBI chr 5:168,661,740...169,301,139
Ensembl chr 5:168,661,733...169,301,129 Ensembl chr 5:168,661,733...169,301,129
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STRA6
signaling receptor and transporter of retinol STRA6
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17273977
NCBI chr15:74,179,466...74,212,267
Ensembl chr15:74,179,466...74,212,267
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TGFB1
transforming growth factor beta 1
ISO EXP
protein:increased expression:lung CTD Direct Evidence: marker/mechanism
CTD
PMID:10646786 , PMID:19635314
RGD:4145129
NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
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THRA
thyroid hormone receptor alpha
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:11685700
NCBI chr17:40,062,193...40,093,867
Ensembl chr17:40,058,290...40,093,867
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THRB
thyroid hormone receptor beta
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:11685700
NCBI chr 3:24,117,153...24,495,708
Ensembl chr 3:24,117,153...24,495,756
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TNF
tumor necrosis factor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10541330
NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
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UCHL1
ubiquitin C-terminal hydrolase L1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18958481
NCBI chr 4:41,256,928...41,268,455
Ensembl chr 4:41,256,413...41,268,455
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VCAM1
vascular cell adhesion molecule 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:12759764
NCBI chr 1:100,719,742...100,739,045
Ensembl chr 1:100,719,742...100,739,045
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WDR26
WD repeat domain 26
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia
ClinVar
PMID:30311386
NCBI chr 1:224,385,146...224,434,797
Ensembl chr 1:224,385,143...224,437,033 Ensembl chr 1:224,385,143...224,437,033
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WT1
WT1 transcription factor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17436238
NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564 Ensembl chr11:32,387,775...32,435,564
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ZFPM2
zinc finger protein, FOG family member 2
EXP IAGP
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Diaphragmatic hernia
CTD ClinVar
PMID:17436238 PMID:30311386
NCBI chr 8:105,318,438...105,804,539
Ensembl chr 8:104,590,733...105,804,539
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ZFPM2-AS1
ZFPM2 antisense RNA 1
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia
ClinVar
PMID:30311386
NCBI chr 8:105,780,410...106,060,503
Ensembl chr 8:105,546,089...106,060,524
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ZFPM2
zinc finger protein, FOG family member 2
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia 3
ClinVar OMIM
PMID:14517948 PMID:16103912 PMID:17568391 PMID:20807224 PMID:21919901 PMID:24702427 PMID:25741868 PMID:28492532
NCBI chr 8:105,318,438...105,804,539
Ensembl chr 8:104,590,733...105,804,539
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ZFPM2-AS1
ZFPM2 antisense RNA 1
IAGP
ClinVar Annotator: match by term: Diaphragmatic hernia 3
ClinVar
PMID:17568391 PMID:21919901 PMID:25741868 PMID:28492532
NCBI chr 8:105,780,410...106,060,503
Ensembl chr 8:105,546,089...106,060,524
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LMBRD1
LMBR1 domain containing 1
IAGP
ClinVar Annotator: match by term: Donnai Barrow syndrome
ClinVar
PMID:19136951 PMID:25741868 PMID:28492532
NCBI chr 6:69,674,010...69,797,010
Ensembl chr 6:69,672,757...69,867,236
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LRP2
LDL receptor related protein 2
IAGP
ClinVar Annotator: match by term: Donnai Barrow syndrome ClinVar Annotator: match by term: Donnai-Barrow syndrome
ClinVar OMIM
PMID:8266995 PMID:9475100 PMID:12923867 PMID:17632512 PMID:18414213 PMID:20359920 PMID:23033978 PMID:24319098 PMID:24406863 PMID:24876117 PMID:25158045 PMID:25326635 PMID:25741868 PMID:26118977 PMID:26529358 PMID:28492532 PMID:32238909
NCBI chr 2:169,127,109...169,362,597
Ensembl chr 2:169,127,109...169,362,534
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LAGE3
L antigen family member 3
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:28805828
NCBI chr X:154,477,769...154,479,257
Ensembl chr X:154,477,769...154,479,257
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OSGEP
O-sialoglycoprotein endopeptidase
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:28805828
NCBI chr14:20,446,401...20,454,812
Ensembl chr14:20,446,401...20,455,089
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TP53RK
TP53 regulating kinase
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:28805828
NCBI chr20:46,684,365...46,689,444
Ensembl chr20:46,684,365...46,689,444
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TPRKB
TP53RK binding protein
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:28805828
NCBI chr 2:73,729,873...73,737,345
Ensembl chr 2:73,729,104...73,737,400
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WDR4
WD repeat domain 4
IAGP
ClinVar Annotator: match by term: Galloway-Mowat syndrome
ClinVar
PMID:25741868 PMID:30079490
NCBI chr21:42,843,075...42,891,695
Ensembl chr21:42,843,094...42,879,568
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WDR73
WD repeat domain 73
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:25466283
NCBI chr15:84,639,285...84,654,290
Ensembl chr15:84,639,281...84,654,343 Ensembl chr15:84,639,281...84,654,343
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ZNF592
zinc finger protein 592
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:20531441
NCBI chr15:84,748,556...84,806,445
Ensembl chr15:84,748,592...84,806,445
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ENG
endoglin
IAGP
ClinVar Annotator: match by term: Galloway-Mowat syndrome 1
ClinVar
PMID:12673790 PMID:15879500 PMID:21158752 PMID:23399955 PMID:24055113 PMID:25637381 PMID:25741868 PMID:28492532
NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658 Ensembl chr 9:127,815,013...127,854,658
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WDR73
WD repeat domain 73
IAGP
ClinVar Annotator: match by term: Galloway-Mowat syndrome 1
OMIM ClinVar
PMID:11391656 PMID:12030328 PMID:16217710 PMID:20531441 PMID:25466283 PMID:25741868 PMID:25873735 PMID:26070982 PMID:26123727 PMID:30315938
NCBI chr15:84,639,285...84,654,290
Ensembl chr15:84,639,281...84,654,343 Ensembl chr15:84,639,281...84,654,343
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ZNF592
zinc finger protein 592
IAGP
ClinVar Annotator: match by term: Galloway-Mowat syndrome 1 ClinVar Annotator: match by term: Spinocerebellar ataxia autosomal recessive 5
ClinVar
PMID:12030328 PMID:20531441 PMID:25741868 PMID:26123727
NCBI chr15:84,748,556...84,806,445
Ensembl chr15:84,748,592...84,806,445
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LAGE3
L antigen family member 3
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 2, X-LINKED
ClinVar OMIM
PMID:12693786 PMID:28805828
NCBI chr X:154,477,769...154,479,257
Ensembl chr X:154,477,769...154,479,257
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LOC107372315
OSGEP/APEX1 bi-directional promoter region
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 3
ClinVar
PMID:25741868 PMID:28805828
NCBI chr14:20,451,644...20,455,336
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OSGEP
O-sialoglycoprotein endopeptidase
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 3
ClinVar OMIM
PMID:11519896 PMID:15966048 PMID:17897280 PMID:18019379 PMID:21791310 PMID:25741868 PMID:28272532 PMID:28805828
NCBI chr14:20,446,401...20,454,812
Ensembl chr14:20,446,401...20,455,089
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TP53RK
TP53 regulating kinase
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 4
ClinVar OMIM
PMID:28805828
NCBI chr20:46,684,365...46,689,444
Ensembl chr20:46,684,365...46,689,444
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TPRKB
TP53RK binding protein
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 5
ClinVar OMIM
PMID:28805828
NCBI chr 2:73,729,873...73,737,345
Ensembl chr 2:73,729,104...73,737,400
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WDR4
WD repeat domain 4
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 6
OMIM ClinVar
PMID:25741868 PMID:26416026 PMID:28617965 PMID:29597095 PMID:30079490
NCBI chr21:42,843,075...42,891,695
Ensembl chr21:42,843,094...42,879,568
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NUP107
nucleoporin 107
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 7
OMIM ClinVar
PMID:25558065 PMID:25741868 PMID:28117080 PMID:28280135 PMID:30179222
NCBI chr12:68,686,971...68,745,809
Ensembl chr12:68,686,951...68,745,809
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NUP133
nucleoporin 133
IAGP
ClinVar Annotator: match by term: GALLOWAY-MOWAT SYNDROME 8
OMIM ClinVar
PMID:11793129 PMID:30427554
NCBI chr 1:229,440,259...229,508,342
Ensembl chr 1:229,440,259...229,508,341
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ATRX
ATRX chromatin remodeler
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr X:77,504,880...77,786,235
Ensembl chr X:77,504,880...77,786,233 Ensembl chr X:77,504,880...77,786,233
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BARX1
BARX homeobox 1
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:93,951,627...93,955,355
Ensembl chr 9:93,951,627...93,955,355
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CASR
calcium sensing receptor
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,683...122,291,629 Ensembl chr 3:122,183,683...122,291,629
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CBS
cystathionine beta-synthase
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:1301198 PMID:9232191 PMID:11359213 PMID:15146473 PMID:15365998 PMID:20490928 PMID:20506325 PMID:20567906 PMID:24211323 PMID:25218699 PMID:25741868 PMID:28492532 PMID:30311386
NCBI chr21:43,053,190...43,076,873
Ensembl chr21:43,053,191...43,076,943
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FAM120A
family with sequence similarity 120A
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:93,451,685...93,566,112
Ensembl chr 9:93,451,685...93,566,112
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FAM120AOS
family with sequence similarity 120A opposite strand
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:93,443,332...93,453,601
Ensembl chr 9:93,431,441...93,453,581
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FBP1
fructose-bisphosphatase 1
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,603,133...94,640,263
Ensembl chr 9:94,603,133...94,640,249
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FBP2
fructose-bisphosphatase 2
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,558,720...94,593,824
Ensembl chr 9:94,558,720...94,593,824
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MFSD14B
major facilitator superfamily domain containing 14B
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,374,327...94,461,042
Ensembl chr 9:94,374,569...94,461,042
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MIRLET7A1
microRNA let-7a-1
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,175,957...94,176,036
Ensembl chr 9:94,175,957...94,176,036
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MIRLET7D
microRNA let-7d
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,178,834...94,178,920
Ensembl chr 9:94,178,834...94,178,920
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MIRLET7F1
microRNA let-7f-1
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,176,347...94,176,433
Ensembl chr 9:94,176,347...94,176,433
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MYPN
myopalladin
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr10:68,087,907...68,212,017
Ensembl chr10:68,106,117...68,212,017
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NUTM2F
NUT family member 2F
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,318,198...94,328,644
Ensembl chr 9:94,318,196...94,328,644
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PHF2
PHD finger protein 2
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:93,576,584...93,679,587
Ensembl chr 9:93,576,584...93,679,587
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PIEZO2
piezo type mechanosensitive ion channel component 2
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr18:10,670,237...11,149,585
Ensembl chr18:10,666,483...11,149,569 Ensembl chr18:10,666,483...11,149,569
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PTCH2
patched 2
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr 1:44,819,845...44,843,253
Ensembl chr 1:44,819,844...44,843,253
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PTPDC1
protein tyrosine phosphatase domain containing 1
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,029,031...94,109,856
Ensembl chr 9:94,030,794...94,109,856
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PTPN11
protein tyrosine phosphatase non-receptor type 11
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr12:112,418,915...112,509,918
Ensembl chr12:112,418,351...112,509,913 Ensembl chr12:112,418,351...112,509,913
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TRPS1
transcriptional repressor GATA binding 1
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
PMID:30311386
NCBI chr 8:115,408,496...115,668,975
Ensembl chr 8:115,408,496...115,809,673
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ZNF169
zinc finger protein 169
IAGP
ClinVar Annotator: match by term: Hiatal hernia
ClinVar
NCBI chr 9:94,259,298...94,303,967
Ensembl chr 9:94,259,298...94,301,829
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DLL3
delta like canonical Notch ligand 3
IAGP
ClinVar Annotator: match by term: Jarcho-Levin syndrome ClinVar Annotator: match by term: Spondylocostal dysostosis 1, autosomal recessive
ClinVar OMIM
PMID:2805381 PMID:10742114 PMID:12791036 PMID:15200511 PMID:15717203 PMID:18485326 PMID:25741868 PMID:28492532
NCBI chr19:39,498,947...39,508,469
Ensembl chr19:39,498,895...39,508,481
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MESP2
mesoderm posterior bHLH transcription factor 2
IAGP
ClinVar Annotator: match by term: Jarcho-Levin syndrome
ClinVar
PMID:25741868
NCBI chr15:89,776,332...89,778,754
Ensembl chr15:89,760,591...89,778,754
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PLEKHG2
pleckstrin homology and RhoGEF domain containing G2
IAGP
ClinVar Annotator: match by term: Spondylocostal dysostosis 1, autosomal recessive
ClinVar
PMID:25741868
NCBI chr19:39,412,582...39,428,415
Ensembl chr19:39,412,669...39,428,415
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