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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:anthracosis
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Accession:DOID:10327 term browser browse the term
Definition:A pneumoconiosis that is characterized by deposition of carbon or coal dust in the lung parenchyma leading to the formation of black nodules and emphysema. (DO)
Synonyms:exact_synonym: Black Lung;   Black Lung Disease;   Black Lungs;   Coal Miner Lung;   Coal Miner's Lung;   Coal Miner's Lungs;   Coal Miners Lung;   Coal Worker Pneumoconiosis;   Coal Worker's Pneumoconioses;   Coal Worker's Pneumoconiosis;   Coal Workers Pneumoconiosis;   Coalworker Pneumoconiosis;   Coalworker's Pneumoconioses;   anthracoses;   black lung diseases;   coal miner's pneumoconiosis;   coal workers' lung;   coalworker's pneumoconiosis;   coalworkers pneumoconiosis;   melanoedema
 primary_id: MESH:D055008
 xref: EFO:1000814;   ICD9CM:500;   NCI:C34390
For additional species annotation, visit the Alliance of Genome Resources.

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anthracosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flacc1 flagellum associated containing coiled-coil domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29394417 NCBI chrNW_004936726:600,213...631,513
Ensembl chrNW_004936726:600,420...625,853 		JBrowse link
G Il1a interleukin 1 alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315 		JBrowse link
G Il1b interleukin 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chrNW_004936783:1,447,158...1,466,331
Ensembl chrNW_004936783:1,447,106...1,466,340 		JBrowse link
G LOC101966280 sodium/potassium-transporting ATPase subunit alpha-4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29394417 NCBI chrNW_004936740:445,952...478,580
Ensembl chrNW_004936740:445,952...478,532 		JBrowse link
G Rbm26 RNA binding motif protein 26 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29394417 NCBI chrNW_004936511:2,175,192...2,252,955
Ensembl chrNW_004936511:2,175,374...2,249,195 		JBrowse link
G Tnf tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16465
    Occupational Diseases 125
      pneumoconiosis 87
        anthracosis 7
          anthracosilicosis 0
Path 2
Term Annotations click to browse term
  disease 16465
    disease of anatomical entity 14117
      respiratory system disease 3166
        lower respiratory tract disease 2031
          lung disease 1994
            interstitial lung disease 442
              pneumoconiosis 87
                anthracosis 7
                  anthracosilicosis 0
paths to the root