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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:anthracosis
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Accession:DOID:10327 term browser browse the term
Definition:A pneumoconiosis that is characterized by deposition of carbon or coal dust in the lung parenchyma leading to the formation of black nodules and emphysema. (DO)
Synonyms:exact_synonym: Black Lung;   Black Lung Disease;   Black Lungs;   Coal Miner Lung;   Coal Miner's Lung;   Coal Miner's Lungs;   Coal Miners Lung;   Coal Worker Pneumoconiosis;   Coal Worker's Pneumoconioses;   Coal Worker's Pneumoconiosis;   Coal Workers Pneumoconiosis;   Coalworker Pneumoconiosis;   Coalworker's Pneumoconioses;   anthracoses;   black lung diseases;   coal miner's pneumoconiosis;   coal workers' lung;   coalworker's pneumoconiosis;   coalworkers pneumoconiosis;   melanoedema
 primary_id: MESH:D055008
 xref: EFO:1000814;   ICD9CM:500;   NCI:C34390
For additional species annotation, visit the Alliance of Genome Resources.


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anthracosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLACC1 flagellum associated containing coiled-coil domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29394417 NCBI chr37:10,404,512...10,438,102
Ensembl chr37:10,404,744...10,430,950 		JBrowse link
G IL1A interleukin 1 alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chr17:36,969,581...36,979,445
Ensembl chr17:36,970,573...36,979,435 		JBrowse link
G IL1B interleukin 1 beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458 		JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chr17:37,236,690...37,250,424
Ensembl chr17:37,212,751...37,249,329 		JBrowse link
G RBM26 RNA binding motif protein 26 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29394417 NCBI chr22:32,579,401...32,664,370
Ensembl chr22:32,581,825...32,664,714 		JBrowse link
G TNF tumor necrosis factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:20005085 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17773
    Occupational Diseases 134
      pneumoconiosis 92
        anthracosis 6
          anthracosilicosis 0
Path 2
Term Annotations click to browse term
  disease 17773
    disease of anatomical entity 15145
      respiratory system disease 3394
        lower respiratory tract disease 2202
          lung disease 2165
            interstitial lung disease 486
              pneumoconiosis 92
                anthracosis 6
                  anthracosilicosis 0
paths to the root