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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:endocarditis
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Accession:DOID:10314 term browser browse the term
Definition:A endocardium disease characterized by inflammation of the endocardium of the heart chambers and valves. (DO)
Synonyms:exact_synonym: endocarditides
 primary_id: MESH:D004696
 xref: EFO:0000465;   ICD10CM:I33.9;   ICD9CM:421.9;   NCI:C34582;   NCI:C35432
For additional species annotation, visit the Alliance of Genome Resources.


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infective endocarditis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr6 toll-like receptor 6 susceptibility ISO DNA:SNP:cds:rs3775073(1263A>G)(p.Lys421Lys)(human) RGD PMID:25213166 RGD:127229900 NCBI chr 5:65,109,373...65,128,387
Ensembl chr 5:65,109,374...65,117,440 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16177
    disease of anatomical entity 15790
      cardiovascular system disease 4671
        heart disease 3337
          endocarditis 1
            Bacterial Endocarditis + 0
            Libman-Sacks endocarditis 0
            infective endocarditis + 1
            nonbacterial thrombotic endocarditis 0
Path 2
Term Annotations click to browse term
  disease 16177
    disease of anatomical entity 15790
      cardiovascular system disease 4671
        heart disease 3337
          endocardium disease 110
            endocarditis 1
              Bacterial Endocarditis + 0
              Libman-Sacks endocarditis 0
              infective endocarditis + 1
              nonbacterial thrombotic endocarditis 0
paths to the root