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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:intestinal infectious disease
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Accession:DOID:100 term browser browse the term
Definition:An intestinal disease that involves intestinal infection that has_material_basis_in viruses, bacteria, fungi and parasites. (DO)
Synonyms:exact_synonym: bacterial enteritis
 primary_id: RDO:9004384
 xref: ICD10CM:A00-A09;   ICD9CM:001-009.99
For additional species annotation, visit the Alliance of Genome Resources.


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Amoebic Dysentery due to Entamoeba Histolytica term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mydgf myeloid-derived growth factor treatment ISO protein:decreased expression:colon (human) RGD PMID:28246365, PMID:28246365 RGD:39128243, RGD:39128243 NCBI chr 9:10,885,521...10,892,744
Ensembl chr 9:10,885,560...10,892,405
JBrowse link
shigellosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr16:72,216,326...72,228,098
Ensembl chr16:72,216,326...72,228,098
JBrowse link
G Il10 interleukin 10 treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il12b interleukin 12B treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Il1b interleukin 1 beta treatment ISO RGD PMID:30615126 RGD:39938959 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16035
    disease of anatomical entity 15289
      gastrointestinal system disease 4633
        intestinal disease 1515
          intestinal infectious disease 6
            dysentery + 6
Path 2
Term Annotations click to browse term
  disease 16035
    disease of anatomical entity 15289
      gastrointestinal system disease 4633
        Gastrointestinal Diseases 2554
          intestinal disease 1515
            intestinal infectious disease 6
              dysentery + 6
paths to the root