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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:male infertility due to acephalic spermatozoa
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Accession:DOID:0112311 term browser browse the term
Definition:A spermatogenic failure characterized by male infertility caused by a majority of spermatozoa lacking heads. (DO)
Synonyms:xref: ORDO:529970
For additional species annotation, visit the Alliance of Genome Resources.



show annotations for term's descendants           Sort by:
 
male infertility due to acephalic spermatozoa term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntrob centrobin, centriole duplication and spindle assembly protein IAGP DNA:insertion:intron 10 (rat) RGD PMID:19710508 RGD:150521555 NCBI chr10:54,022,523...54,047,793
Ensembl chr10:54,022,852...54,044,849
JBrowse link
G Cntrobhd centrobin, centriole duplication and spindle assembly protein; hypodacty mutant IAGP DNA:insertion:intron 10 (rat) RGD PMID:19710508 RGD:150521555
spermatogenic failure 16 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun5 Sad1 and UNC84 domain containing 5 ISO ClinVar Annotator: match by term: Spermatogenic failure 16 OMIM
ClinVar
PMID:27640305 PMID:28492532 PMID:29331481 NCBI chr 3:142,334,902...142,355,330
Ensembl chr 3:142,334,928...142,355,330
JBrowse link
spermatogenic failure 21 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brdt bromodomain testis associated ISO ClinVar Annotator: match by term: Spermatogenic failure 21 ClinVar
OMIM
PMID:28199965 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
spermatogenic failure 26 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsga10 testis specific 10 ISO ClinVar Annotator: match by term: Spermatogenic failure 26 ClinVar
OMIM
PMID:28905369 NCBI chr 9:39,991,822...40,098,239
Ensembl chr 9:39,991,830...40,098,232
JBrowse link
spermatogenic failure 31 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyba cytochrome b-245 alpha chain ISO ClinVar Annotator: match by term: CYBA DEFICIENCY ClinVar PMID:3368442 PMID:9445163 PMID:10440830 PMID:19388116 PMID:25741868 More... NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
JBrowse link
G Pmfbp1 polyamine modulated factor 1 binding protein 1 ISO ClinVar Annotator: match by term: Spermatogenic failure 31 OMIM
ClinVar
PMID:25741868 PMID:30032984 PMID:30298696 NCBI chr19:37,443,432...37,507,880
Ensembl chr19:37,458,108...37,507,879
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18145
    disease of anatomical entity 17519
      reproductive system disease 2856
        male reproductive system disease 1917
          male infertility 240
            spermatogenic failure 105
              male infertility due to acephalic spermatozoa 7
                spermatogenic failure 16 1
                spermatogenic failure 21 1
                spermatogenic failure 26 1
                spermatogenic failure 31 2
Path 2
Term Annotations click to browse term
  disease 18145
    disease of anatomical entity 17519
      Urogenital Diseases 4704
        Female Urogenital Diseases and Pregnancy Complications 2227
          Female Urogenital Diseases 1847
            female reproductive system disease 1843
              infertility 323
                male infertility 240
                  spermatogenic failure 105
                    male infertility due to acephalic spermatozoa 7
                      spermatogenic failure 16 1
                      spermatogenic failure 21 1
                      spermatogenic failure 26 1
                      spermatogenic failure 31 2
paths to the root