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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:large congenital melanocytic nevus
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Accession:DOID:0111359 term browser browse the term
Definition:A skin disease characterized by the presence at birth of a pigmented skin lesion composed of melanocytes of more than 20 cm in projected adult diameter that has_material_basis_in somatic mutation in NRAS on chromosome 11p15.5. (DO)
Synonyms:exact_synonym: CMNS;   Congenital pigmented nevus;   GIANT CONGENITAL PIGMENTED NEVUS;   GMN;   GPHN;   Giant Pigmented Hairy Nevus;   Giant congenital melanocytic nevus;   LCMN;   MELANOCYTIC NEVUS SYNDROME, CONGENITAL;   congenital melanocytic nevus syndrome, somatic
 narrow_synonym: PIGMENTED MOLES NEVUS SPILUS;   spitz nevus
 primary_id: MESH:C536819
 alt_id: OMIM:137550
 xref: NCI:C3944;   NCI:C4234;   ORDO:626
For additional species annotation, visit the Alliance of Genome Resources.



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large congenital melanocytic nevus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Congenital giant melanocytic nevus | ClinVar Annotator: match by term: Large congenital melanocytic nevus OMIM
ClinVar
PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 More... NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Congenital giant melanocytic nevus | ClinVar Annotator: match by term: Large congenital melanocytic nevus ClinVar PMID:16170316 PMID:16329078 PMID:16372351 PMID:16443854 PMID:16835863 More... NCBI chr 1:196,299,843...196,315,170
Ensembl chr 1:196,299,846...196,315,172
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Congenital giant melanocytic nevus OMIM
ClinVar
PMID:1654209 PMID:2278970 PMID:2674680 PMID:3102434 PMID:3122217 More... NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18109
    physical disorder 4115
      large congenital melanocytic nevus 3
Path 2
Term Annotations click to browse term
  disease 18109
    disease of cellular proliferation 7277
      Neoplasms by Histologic Type 4992
        Nevi and Melanomas 352
          Nevus 21
            Pigmented Nevus 7
              large congenital melanocytic nevus 3
paths to the root