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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:brachydactyly type E2
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Accession:DOID:0110976 term browser browse the term
Definition:A characterized byautosomal dominant inheritance of short stature, tooth abnormaities, and short metacarpals and metatarsals that has_material_basis_in heterozygous mutation in the PTHLH gene on chromosome 12p. (DO)
Synonyms:exact_synonym: BDE2
 primary_id: OMIM:613382
 alt_id: RDO:0009828
For additional species annotation, visit the Alliance of Genome Resources.

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brachydactyly type E2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like hormone ISO ClinVar Annotator: match by OMIM:613382
ClinVar Annotator: match by term: Brachydactyly type E2		 OMIM
ClinVar		 PMID:20170896 PMID:25801215 PMID:26763883 PMID:29947179 PMID:31283647 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17205
    physical disorder 3086
      Congenital Foot Deformities 68
        brachydactyly type E2 1
Path 2
Term Annotations click to browse term
  disease 17205
    disease of anatomical entity 16551
      musculoskeletal system disease 6416
        connective tissue disease 4420
          bone disease 3106
            bone development disease 1414
              dysostosis 392
                brachydactyly 31
                  Brachydactyly, Type E 3
                    brachydactyly type E2 1
paths to the root