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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:hereditary spastic paraplegia 23
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Accession:DOID:0110774 term browser browse the term
Definition:A hereditary spastic paraplegia that has_material_basis_in variation in the chromosome region 1q24-q32. (DO)
Synonyms:exact_synonym: Abdallat Davis Farrage syndrome;   Abdallat syndrome;   Lison syndrome;   SPG23;   Spastic paraparesis-vitiligo-premature graying-characteristic facies syndrome;   spastic paraparesis, vitiligo, premature graying, characteristic facies;   spastic paraplegia 23;   spastic paraplegia and pigmentary abnormalities;   spastic paraplegia with pigmentary abnormalities;   spastic paraplegia, vitiligo, premature graying and characteristic facies
 broad_synonym: DSTYK-RELATED CONDITION
 primary_id: MESH:C536859
 alt_id: OMIM:270750
 xref: GARD:336;   ORDO:101003

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hereditary spastic paraplegia 23 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dstyk dual serine/threonine and tyrosine protein kinase ISO ClinVar Annotator: match by term: DSTYK-related condition | ClinVar Annotator: match by term: Hereditary spastic paraplegia 23 OMIM
ClinVar		 PMID:17273976 PMID:23862974 PMID:25741868 PMID:27657687 PMID:28492532 More... NCBI chrNW_004955406:40,922,972...40,971,433
Ensembl chrNW_004955406:40,922,972...40,971,582 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16063
    sensory system disease 6160
      skin disease 3500
        autoimmune disease of skin and connective tissue 166
          vitiligo 40
            hereditary spastic paraplegia 23 1
Path 2
Term Annotations click to browse term
  disease 16063
    disease of anatomical entity 13820
      Immune & Inflammatory Diseases 4634
        immune system disease 4032
          primary immunodeficiency disease 3472
            autoimmune disease 1851
              autoimmune disease of musculoskeletal system 830
                autoimmune disease of skin and connective tissue 166
                  vitiligo 40
                    hereditary spastic paraplegia 23 1
paths to the root