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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:agenesis of the corpus callosum with peripheral neuropathy
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Accession:DOID:0090003 term browser browse the term
Definition:A neurodegenerative disease characterized by autosomal recessive inheritance with early onset of severe sensory-motor polyneuropathy, variable degree of agenesis of the corpus callosum, amyotrophy, hypotonia, and cognitive impairment that has_material_basis_in homozygous or compound heterozygous mutation in the SLC12A6 gene on chromosome 15q14. (DO)
Synonyms:exact_synonym: ACCPN;   Agenesis of Corpus Callosum with Peripheral Neuropathy;   Agenesis of Corpus Callosum with Polyneuropathy;   Andermann syndrome;   Charlevoix disease;   Corpus Callosum Agenesis Neuronopathy;   Hereditary Motor and Sensory Neuropathy with Agenesis of the Corpus Callosum;   agenesis of corpus callosum with neuronopathy;   corpus callosum agenesis-neuronopathy syndrome;   hereditary motor and sensory neuropathy with agenesis of corpus callosum;   polyneuropathy, sensorimotor, with or without agenesis of the corpus callosum
 primary_id: MESH:C536446
 alt_id: DOID:0060600;   OMIM:218000;   RDO:0002040;   RDO:9002736
 xref: ORDO:1496
For additional species annotation, visit the Alliance of Genome Resources.


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agenesis of the corpus callosum with peripheral neuropathy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO ClinVar Annotator: match by term: Agenesis of the corpus callosum with peripheral neuropathy ClinVar PMID:15829536 PMID:22047666 PMID:25741868 PMID:27535533 PMID:28492532 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Cln6 CLN6, transmembrane ER protein ISO ClinVar Annotator: match by term: Agenesis of the corpus callosum with peripheral neuropathy ClinVar PMID:25741868 PMID:28492532 NCBI chr 8:67,733,215...67,748,170
Ensembl chr 8:67,733,215...67,748,172
JBrowse link
G Emc4 ER membrane protein complex subunit 4 ISO ClinVar Annotator: match by term: Andermann syndrome ClinVar NCBI chr 3:103,852,139...103,857,172
Ensembl chr 3:103,852,139...103,857,158
JBrowse link
G Nop10 NOP10 ribonucleoprotein ISO ClinVar Annotator: match by term: Agenesis of the corpus callosum with peripheral neuropathy ClinVar NCBI chr 3:103,747,654...103,748,739
Ensembl chr 3:103,747,654...103,748,739
JBrowse link
G Slc12a6 solute carrier family 12, member 6 ISO DNA:frameshift mutations, missense mutation:cds:multiple (human)
ClinVar Annotator: match by term: Agenesis of the corpus callosum with peripheral neuropathy
ClinVar Annotator: match by term: Andermann syndrome
ClinVar Annotator: match by OMIM:218000
ClinVar
OMIM
PMID:12368912 PMID:12838516 PMID:16606917 PMID:17893295 PMID:18414213 PMID:18566107 PMID:20020398 PMID:21628467 PMID:24341143 PMID:25525159 PMID:25741868 PMID:26392352 PMID:28492532, PMID:16606917 RGD:1580594 NCBI chr 3:103,752,213...103,852,686
Ensembl chr 3:103,753,238...103,852,686
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16035
    disease of anatomical entity 15289
      nervous system disease 10903
        peripheral nervous system disease 2500
          agenesis of the corpus callosum with peripheral neuropathy 5
Path 2
Term Annotations click to browse term
  disease 16035
    Developmental Diseases 9546
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 8378
        genetic disease 7877
          monogenic disease 5719
            autosomal genetic disease 4736
              autosomal recessive disease 2602
                agenesis of the corpus callosum with peripheral neuropathy 5
paths to the root