RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: partial lipodystrophy
Accession: DOID:0080299
browse the term
Definition: A lipodystrophy that is characterized by partial loss of adipose tissue. (DO)
Synonyms: exact_synonym: APLD; APLD, SUSCEPTIBILITY TO; Barraquer-Simons Syndrome; LIPODYSTROPHY, PARTIAL, ACQUIRED, SUSCEPTIBILITY TO; Lipodystrophy, Cephalothoracic Type; partial lipodystrophy, acquired; progressive partial lipodystrophy
primary_id: MESH:C562448
alt_id: OMIM:608709
For additional species annotation, visit the
Alliance of Genome Resources .
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Lmnb2
lamin B2
susceptibility
ISO
ClinVar Annotator: match by OMIM:608709 ClinVar Annotator: match by term: Acquired partial lipodystrophy CTD Direct Evidence: marker/mechanism
ClinVar CTD OMIM
PMID:16826530 PMID:22768673 PMID:22995991 PMID:25741868 PMID:26467025 PMID:27535533 PMID:28492532
NCBI chr 7:11,657,870...11,676,936
Ensembl chr 7:11,660,934...11,675,472
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Akt2
AKT serine/threonine kinase 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19793595
NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
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Cav1
caveolin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19793595
NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
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Cidec
cell death-inducing DFFA-like effector c
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chr 4:145,377,482...145,390,497
Ensembl chr 4:145,377,431...145,390,497
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Lipe
lipase E, hormone sensitive type
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chr 1:82,248,031...82,266,727
Ensembl chr 1:82,248,046...82,266,727
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Lmna
lamin A/C
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Lipoatrophy with Diabetes, Hepatic Steatosis, Hypertrophic Cardiomyopathy, and Leukomelanodermic Papules ClinVar Annotator: match by term: Lipodystrophy, reverse partial ClinVar Annotator: match by term: Familial partial lipodystrophy DNA:missense mutations:cds:multiple (human)
CTD ClinVar
PMID:10587585 PMID:10612827 PMID:10655060 PMID:10739751 PMID:10999791 PMID:11078466 PMID:11342468 PMID:11344241 PMID:11503164 PMID:12628721 PMID:12629077 PMID:12844477 PMID:12920062 PMID:12927431 PMID:14510863 PMID:14597414 PMID:14615128 PMID:14749366 PMID:15060110 PMID:15140538 PMID:15475483 PMID:15531479 PMID:15998779 PMID:16174718 PMID:16241930 PMID:16278265 PMID:16440304 PMID:16809772 PMID:17250669 PMID:17274801 PMID:17377071 PMID:18396274 PMID:18414213 PMID:18549403 PMID:18795223 PMID:18926329 PMID:19169477 PMID:19220582 PMID:19318026 PMID:19418082 PMID:19424285 PMID:19427440 PMID:19589617 PMID:19622949 PMID:19638735 PMID:19680556 PMID:19793595 PMID:19859838 PMID:20130076 PMID:20625965 PMID:20848652 PMID:20980393 PMID:21465660 PMID:21520333 PMID:21883346 PMID:22224630 PMID:22266370 PMID:22326558 PMID:22464770 PMID:22700598 PMID:22918509 PMID:23183350 PMID:23328570 PMID:23853504 PMID:23861362 PMID:24001739 PMID:24002959 PMID:24033266 PMID:24055113 PMID:24503780 PMID:24642510 PMID:24721642 PMID:24768879 PMID:24846508 PMID:25163546 PMID:25214167 PMID:25351510 PMID:25367549 PMID:25524705 PMID:25637381 PMID:25741868 PMID:25885670 PMID:26183555 PMID:26332594 PMID:26467025 PMID:26602028 PMID:26662654 PMID:26752647 PMID:27532257 PMID:27585670 PMID:27707468 PMID:27723096 PMID:27813223 PMID:27841971 PMID:27854218 PMID:27896052 PMID:27919367 PMID:28074886 PMID:28255936 PMID:28341588 PMID:28416588 PMID:28492532 PMID:28531892 PMID:28641778 PMID:28663758 PMID:28679633 PMID:28785654 PMID:28874324 PMID:29040816 PMID:29078011 PMID:29149195 PMID:29237675 PMID:29438482 PMID:29693488 PMID:29791652 PMID:30165862 PMID:30420677 PMID:31525256 PMID:32004434 , PMID:10655060
RGD:12791019
NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
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Plin1
perilipin 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
NCBI chr 1:141,458,907...141,470,927
Ensembl chr 1:141,458,181...141,471,010
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Pparg
peroxisome proliferator-activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:19793595
NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
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Zmpste24
zinc metallopeptidase STE24
ISS
OMIM:151660 | OMIM:604367 | OMIM:608600 | OMIM:613877 | OMIM:615238
MouseDO
NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
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Lmna
lamin A/C
ISO
ClinVar Annotator: match by term: Partial lipodystrophy, Dunnigan ClinVar Annotator: match by term: Lipodystrophy, familial, of limbs and lower trunk
OMIM ClinVar
PMID:12628721 PMID:12920062 PMID:15060110 PMID:15140538 PMID:15475483 PMID:15998779 PMID:16278265 PMID:16809772 PMID:17250669 PMID:17377071 PMID:18414213 PMID:18549403 PMID:18795223 PMID:18926329 PMID:19169477 PMID:19318026 PMID:19424285 PMID:19427440 PMID:19589617 PMID:19638735 PMID:19680556 PMID:20848652 PMID:21465660 PMID:21883346 PMID:22224630 PMID:22266370 PMID:22464770 PMID:22700598 PMID:22918509 PMID:23183350 PMID:23853504 PMID:23861362 PMID:24001739 PMID:24033266 PMID:24055113 PMID:24503780 PMID:24721642 PMID:24846508 PMID:25163546 PMID:25214167 PMID:25351510 PMID:25367549 PMID:25637381 PMID:25741868 PMID:26332594 PMID:26467025 PMID:26602028 PMID:27532257 PMID:27585670 PMID:27707468 PMID:27723096 PMID:27841971 PMID:27896052 PMID:27919367 PMID:28074886 PMID:28255936 PMID:28341588 PMID:28416588 PMID:28492532 PMID:28663758 PMID:28785654 PMID:28874324 PMID:29078011 PMID:29149195 PMID:29237675 PMID:29693488 PMID:29791652 PMID:30165862 PMID:30420677 PMID:31525256 PMID:32004434
NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
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Bscl2
BSCL2 lipid droplet biogenesis associated, seipin
ISO
ClinVar Annotator: match by term: LIPODYSTROPHY, FAMILIAL PARTIAL, ASSOCIATED WITH PPARG MUTATIONS
ClinVar
NCBI chr 1:225,035,956...225,046,137
Ensembl chr 1:225,037,737...225,046,040
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Pparg
peroxisome proliferator-activated receptor gamma
ISO
ClinVar Annotator: match by term: Lipodystrophy, familial partial, type 3 ClinVar Annotator: match by term: LIPODYSTROPHY, FAMILIAL PARTIAL, ASSOCIATED WITH PPARG MUTATIONS
ClinVar OMIM
PMID:9467001 PMID:9792554 PMID:10523018 PMID:10622252 PMID:10851250 PMID:11788685 PMID:12453919 PMID:14671186 PMID:15254591 PMID:17299075 PMID:17356052 PMID:22461176 PMID:25157153 PMID:25741868 PMID:28492532
NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
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Plin1
perilipin 1
ISO
ClinVar Annotator: match by term: Lipodystrophy, familial partial, type 4 ClinVar Annotator: match by term: LIPODYSTROPHY, FAMILIAL PARTIAL, ASSOCIATED WITH PLIN1 MUTATIONS
ClinVar OMIM
PMID:21345103 PMID:25741868 PMID:28492532
NCBI chr 1:141,458,907...141,470,927
Ensembl chr 1:141,458,181...141,471,010
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Cidec
cell death-inducing DFFA-like effector c
ISO
ClinVar Annotator: match by OMIM:615238
OMIM ClinVar
PMID:18654663 PMID:20049731
NCBI chr 4:145,377,482...145,390,497
Ensembl chr 4:145,377,431...145,390,497
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Cela2a
chymotrypsin like elastase 2A
ISO
ClinVar Annotator: match by term: LIPODYSTROPHY, FAMILIAL PARTIAL, ASSOCIATED WITH LIPE MUTATIONS
ClinVar
PMID:31358993
NCBI chr 5:160,374,031...160,383,782
Ensembl chr 5:160,374,031...160,383,782
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Lipe
lipase E, hormone sensitive type
ISO
ClinVar Annotator: match by term: LIPODYSTROPHY, FAMILIAL PARTIAL, ASSOCIATED WITH LIPE MUTATIONS
ClinVar OMIM
PMID:25741868 PMID:28492532
NCBI chr 1:82,248,031...82,266,727
Ensembl chr 1:82,248,046...82,266,727
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Cav1
caveolin 1
ISO
ClinVar Annotator: match by term: Partial lipodystrophy, congenital cataracts, and neurodegeneration syndrome
OMIM ClinVar
PMID:11739396 PMID:18237401 PMID:25356970 PMID:25898808
NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
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