Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:cytomegalovirus retinitis
go back to main search page
Accession:DOID:0080160 term browser browse the term
Definition:A retinitis that has_material_basis_in Cytomegalovirus. (DO)
Synonyms:exact_synonym: CMV retinitis;   cytomegaloviral retinitis
 primary_id: MESH:D017726
 xref: EFO:1001302;   GARD:9531



show annotations for term's descendants           Sort by:
cytomegalovirus retinitis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2-M2 histocompatibility 2, M region locus 2 ISO associated with HIV Infections; DNA:polymorphisms, haplotype:cds:HLA-B44 (human) RGD PMID:11564593 RGD:7365106 NCBI chr17:37,791,742...37,794,445
Ensembl chr17:37,791,742...37,794,443
JBrowse link
G H2-Q4 histocompatibility 2, Q region locus 4 ISO associated with HIV Infections; DNA:polymorphisms, haplotype:cds:HLA-B44 (human) RGD PMID:11564593 RGD:7365106 NCBI chr17:35,598,593...35,603,650
Ensembl chr17:35,598,593...35,604,266
JBrowse link
G Il10 interleukin 10 IEP associated with Murine Acquired Immunodeficiency Syndrome RGD PMID:23415673 RGD:7364815 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 IEP protein:increased expression:optic cup, retina (mouse) RGD PMID:29853772 RGD:127229940 NCBI chr14:56,022,452...56,026,314
Ensembl chr14:56,022,452...56,026,322
JBrowse link
G Tnf tumor necrosis factor IMP
IEP
mRNA,protein:increased expression:eye: RGD PMID:22072377 PMID:17389501 RGD:7394768, RGD:7394808 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a IMP RGD PMID:17389501 RGD:7394808 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18294
    disease by infectious agent 2193
      viral infectious disease 1681
        Viral Eye Infections 28
          cytomegalovirus retinitis 6
Path 2
Term Annotations click to browse term
  disease 18294
    Pathological Conditions, Signs and Symptoms 12298
      Signs and Symptoms 10077
        Neurologic Manifestations 9730
          sensory system disease 6694
            eye disease 3430
              Eye Infections 58
                Viral Eye Infections 28
                  cytomegalovirus retinitis 6
paths to the root