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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:NUT midline carcinoma
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Accession:DOID:0060463 term browser browse the term
Definition:A carcinoma that is characterized by a BRD4-NUT translocation involving the rearrangement of the bromodomain-containing protein 4 (BRD4) and the gene encoding nuclear protein of the testis (NUT) at 15q14, BRD4-NUT t(15;19)(q14;q13.1) and arises from midline epithelial structures, most commonly the head, neck, and mediastinum.
Synonyms:exact_synonym: nuclear protein in testis midline carcinoma
 xref: NCI:C45716;   ORDO:443167
For additional species annotation, visit the Alliance of Genome Resources.


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NUT midline carcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
CL CVCL_3220 Ty-82 IEA NCI:C45716,ORDO:443167 CELLOSAURUS
CL CVCL_5132 HCC2429 IEA NCI:C45716,ORDO:443167 CELLOSAURUS
CL CVCL_UD98 SNU-2972-1 IEA NCI:C45716,ORDO:443167 CELLOSAURUS
CL CVCL_UD99 SNU-3178S IEA NCI:C45716,ORDO:443167 CELLOSAURUS

Term paths to the root
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Term Annotations click to browse term
  disease 20257
    disease of cellular proliferation 8105
      cancer 5487
        cell type cancer 3783
          carcinoma 3137
            NUT midline carcinoma 0
paths to the root