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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:posterior polymorphous corneal dystrophy
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Accession:DOID:0060457 term browser browse the term
Definition:A corneal dystrophy that is characterised by changes in Descemet's membrane and endothelial layer. (DO)
Synonyms:exact_synonym: PPCD;   Schlichting dystrophy;   hereditary polymorphus posterior corneal dystrophy
 xref: OMIM:PS122000;   ORDO:98973
For additional species annotation, visit the Alliance of Genome Resources.

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posterior polymorphous corneal dystrophy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vsx1 visual system homeobox 1 ISO ClinVar Annotator: match by term: Posterior Polymorphous Corneal Dystrophy
ClinVar Annotator: match by term: Polymorphous posterior corneal dystrophy		 ClinVar PMID:7795607 PMID:11978762 PMID:15623752 PMID:16303937 PMID:16384943 PMID:18216574 PMID:18626569 PMID:19763142 PMID:21976959 PMID:22171159 PMID:23592923 PMID:24033266 PMID:25741868 PMID:26879370 PMID:28492532 NCBI chr 3:146,484,235...146,494,757
Ensembl chr 3:146,484,238...146,491,837 		JBrowse link
posterior polymorphous corneal dystrophy 1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ovol2 ovo-like zinc finger 2 ISO ClinVar Annotator: match by term: POSTERIOR POLYMORPHOUS CORNEAL DYSTROPHY
CTD Direct Evidence: marker/mechanism		 ClinVar
OMIM
CTD		 PMID:4900143 PMID:16303937 PMID:23049806 PMID:26749309 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063 		JBrowse link
G Slc4a11 solute carrier family 4 member 11 ISO ClinVar Annotator: match by term: Posterior polymorphous corneal dystrophy 1 ClinVar PMID:25182519 PMID:28492532 NCBI chr 3:123,224,242...123,236,535
Ensembl chr 3:123,224,242...123,236,535 		JBrowse link
G Vsx1 visual system homeobox 1 ISO DNA:missense mutation:cds:p.H244R (human)
ClinVar Annotator: match by term: MAUMENEE CORNEAL DYSTROPHY
ClinVar Annotator: match by term: Posterior polymorphous corneal dystrophy 1		 ClinVar PMID:7795607 PMID:11978762 PMID:15623752 PMID:16303937 PMID:16384943 PMID:18216574 PMID:18626569 PMID:19763142 PMID:21976959 PMID:22171159 PMID:23592923 PMID:24033266 PMID:25741868 PMID:26879370 PMID:28492532, PMID:16384943 RGD:8657036 NCBI chr 3:146,484,235...146,494,757
Ensembl chr 3:146,484,238...146,491,837 		JBrowse link
posterior polymorphous corneal dystrophy 2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col8a2 collagen type VIII alpha 2 chain ISO ClinVar Annotator: match by OMIM:609140 OMIM
ClinVar		 PMID:399801 PMID:11689488 PMID:15914606 PMID:18024822 PMID:22002996 PMID:23422828 NCBI chr 5:144,308,527...144,335,142
Ensembl chr 5:144,308,611...144,335,172 		JBrowse link
posterior polymorphous corneal dystrophy 3 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb1 zinc finger E-box binding homeobox 1 ISO ClinVar Annotator: match by null OMIM
ClinVar		 PMID:12654361 PMID:16252232 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914 		JBrowse link
posterior polymorphous corneal dystrophy 4 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 ISO ClinVar Annotator: match by term: CORNEAL DYSTROPHY, POSTERIOR POLYMORPHOUS, 4 ClinVar
OMIM		 PMID:29499165 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16123
    sensory system disease 5245
      eye disease 2673
        corneal disease 196
          corneal dystrophy 45
            posterior polymorphous corneal dystrophy 6
              posterior polymorphous corneal dystrophy 1 3
              posterior polymorphous corneal dystrophy 2 1
              posterior polymorphous corneal dystrophy 3 1
              posterior polymorphous corneal dystrophy 4 1
Path 2
Term Annotations click to browse term
  disease 16123
    disease of anatomical entity 15370
      nervous system disease 10975
        sensory system disease 5245
          eye disease 2673
            Hereditary Eye Diseases 575
              corneal dystrophy 45
                posterior polymorphous corneal dystrophy 6
                  posterior polymorphous corneal dystrophy 1 3
                  posterior polymorphous corneal dystrophy 2 1
                  posterior polymorphous corneal dystrophy 3 1
                  posterior polymorphous corneal dystrophy 4 1
paths to the root