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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:male reproductive organ benign neoplasm
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Accession:DOID:0060087 term browser browse the term
Definition:A reproductive organ benign neoplasm that is characterized by a lack of malignancy located_in the male reproductive system. (DO)
Synonyms:primary_id: RDO:9002414
For additional species annotation, visit the Alliance of Genome Resources.



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penile benign neoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd1 cyclin D1 ISO protein:increased expression:nucleus RGD PMID:17695500 RGD:2289129 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
JBrowse link
G Ptges prostaglandin E synthase ISO protein:increased expression:penis, skin RGD PMID:14871981 RGD:2300087 NCBI chr 3:14,177,892...14,189,236 JBrowse link
G Top2a DNA topoisomerase II alpha severity ISO RGD PMID:18489530 RGD:2315128 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17289
    disease of anatomical entity 16625
      reproductive system disease 2756
        reproductive organ benign neoplasm 29
          male reproductive organ benign neoplasm 3
            benign prostate phyllodes tumor 0
            epididymis adenomatoid tumor 0
            lipoma of spermatic cord 0
            penile benign neoplasm 3
            prostate leiomyoma 0
            prostatic adenoma 0
            rete testis adenoma 0
            seminal vesicle tumor + 0
            testicular fibroma 0
            testicular gonadoblastoma 0
            testicular granulosa cell tumor + 0
            testicular thecoma 0
Path 2
Term Annotations click to browse term
  disease 17289
    disease of anatomical entity 16625
      Urogenital Diseases 4386
        reproductive system disease 2756
          male reproductive system disease 1873
            Male Genital Neoplasms 1307
              male reproductive organ benign neoplasm 3
                benign prostate phyllodes tumor 0
                epididymis adenomatoid tumor 0
                lipoma of spermatic cord 0
                penile benign neoplasm 3
                prostate leiomyoma 0
                prostatic adenoma 0
                rete testis adenoma 0
                seminal vesicle tumor + 0
                testicular fibroma 0
                testicular gonadoblastoma 0
                testicular granulosa cell tumor + 0
                testicular thecoma 0
paths to the root