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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:colon adenoma
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Accession:DOID:0050912 term browser browse the term
Definition:A colonic benign neoplasm that has_material_basis_in epithelial tissue with glandular origin. (DO)


show annotations for term's descendants           Sort by:
colon adenoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 ISO protein:increased expression:: RGD PMID:11809809 RGD:151356508 NCBI chr 9:14,559,476...14,588,950
Ensembl chr 9:14,559,388...14,588,530 		JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D ISO protein:increased expression:colon (human) RGD PMID:29079724 RGD:152177516 NCBI chr20:36,189,986...36,488,460
Ensembl chr20:36,191,810...36,613,686 		JBrowse link
G CCND1 cyclin D1 severity ISO RGD PMID:11375949 RGD:151665121 NCBI chr18:48,501,905...48,509,684
Ensembl chr18:48,501,899...48,516,005 		JBrowse link
G CCND2 cyclin D2 severity ISO RGD PMID:11375949 RGD:151665121 NCBI chr27:40,563,306...40,593,362
Ensembl chr27:40,564,921...40,594,255 		JBrowse link
G CHKA choline kinase alpha ISO protein:increased expression:colonic mucosa (human) RGD PMID:10363580 RGD:10401945 NCBI chr18:49,717,512...49,784,653
Ensembl chr18:49,745,437...49,781,882 		JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:26194191 RGD:11086893 NCBI chr 9:25,199,287...25,240,693
Ensembl chr 9:25,198,805...25,240,578 		JBrowse link
G RAC1 Rac family small GTPase 1 ISO RGD PMID:12865273 RGD:13432048 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RBP4 retinol binding protein 4 ISO protein:increased expression:blood serum (human) RGD PMID:25712946 RGD:329849123 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO mRNA:decreased expression:colon (human) RGD PMID:29875879 RGD:150429665 NCBI chr32:26,021,745...26,145,109
Ensembl chr32:26,059,693...26,143,536 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17774
    disease of cellular proliferation 7264
      Neoplasms by Histologic Type 5064
        Glandular and Epithelial Neoplasms 3586
          adenoma 682
            colon adenoma 9
Path 2
Term Annotations click to browse term
  disease 17774
    disease of anatomical entity 15146
      gastrointestinal system disease 6498
        Digestive System Neoplasms 3711
          Gastrointestinal Neoplasms 3597
            Intestinal Neoplasms 1753
              Colorectal Neoplasms 1734
                Colonic Neoplasms 393
                  colonic benign neoplasm 12
                    colon adenoma 9
paths to the root