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ONTOLOGY REPORT - ANNOTATIONS
Term:synucleinopathy
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Accession:DOID:0050890 term browser browse the term
Definition:A neurodegenerative disease that is characterized by the abnormal accumulation of aggregates of alpha-synuclein protein in neurons, nerve fibres or glial cells. (DO)
Synonyms:exact_synonym: α-synucleinopathy;   a-synucleinopathies;   a-synucleinopathy;   alpha synuclein pathologies;   alpha synuclein pathology;   alpha synucleinopathies;   alpha-synucleinopathy;   synucleinopathies
 primary_id: MESH:D000080874
For additional species annotation, visit the Alliance of Genome Resources.

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synucleinopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:11049591
G Dctn2 dynactin subunit 2 JBrowse link 7 70,555,953 70,571,433 RGD:11049591
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:11049591
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:11049591
amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:5685005
RGD:11554173
RGD:7240710
RGD:5685008
Bilateral Striatal Necrosis with Dystonia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-nd6 mitochondrially encoded NADH dehydrogenase 6 JBrowse link MT 13,543 14,061 RGD:8554872
Early Onset Parkinsonism with Mental Retardation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clic2 chloride intracellular channel 2 JBrowse link 20 295,338 310,363 RGD:8554872
Kufor-Rakeb syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:7240710
RGD:8554872
RGD:11554173
late onset Parkinson's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:7240710
G Atxn2 ataxin 2 JBrowse link 12 40,264,601 40,335,637 RGD:7240710
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:8554872
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:8554872
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:8554872
RGD:7240710
G Fgf20 fibroblast growth factor 20 JBrowse link 16 55,152,748 55,159,352 RGD:8554872
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:7240710
RGD:8554872
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:5148021
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:8554872
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:7240710
RGD:8554872
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:8554872
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:8554872
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:8554872
RGD:11554173
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:8554872
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:8554872
G Podxl podocalyxin-like JBrowse link 4 58,829,049 58,893,353 RGD:8554872
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:5490156
G Sncaip synuclein, alpha interacting protein JBrowse link 18 47,739,284 47,877,679 RGD:11554173
RGD:8554872
G Tbp TATA box binding protein JBrowse link 1 57,491,381 57,509,335 RGD:7240710
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:7240710
RGD:11554173
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:8554872
multiple system atrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link 3 80,634,470 80,830,068 RGD:14390070
G Coq2 coenzyme Q2, polyprenyltransferase JBrowse link 14 10,581,102 10,601,093 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:8663486
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:5688775
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5509960
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:1358597
G Mir96 microRNA 96 JBrowse link 4 57,463,366 57,463,471 RGD:11553929
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:6480516
G Slc1a1 solute carrier family 1 member 1 JBrowse link 1 246,955,017 247,035,159 RGD:11553929
G Slc6a6 solute carrier family 6 member 6 JBrowse link 4 123,638,619 123,713,469 RGD:11553929
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:6480091
olivopontocerebellar atrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aptx aprataxin JBrowse link 5 56,987,714 57,009,481 RGD:10054301
G Tsen54 tRNA splicing endonuclease subunit 54 JBrowse link 10 104,358,401 104,366,926 RGD:8554872
Parkinson's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:1331525
RGD:10046014
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:11554173
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:8693409
RGD:8693592
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1331525
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:5509846
G Adarb2 adenosine deaminase, RNA-specific, B2 JBrowse link 17 58,098,979 58,653,137 RGD:11554173
G Adcy5 adenylate cyclase 5 JBrowse link 11 68,695,839 68,842,452 RGD:13592920
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:8554872
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:13592920
G Afdn afadin, adherens junction formation factor JBrowse link 1 53,713,873 53,861,918 RGD:13838733
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:10047397
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:11554173
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:5509064
RGD:5509076
RGD:5509074
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:6892707
G Anxa5 annexin A5 JBrowse link 2 123,162,477 123,194,730 RGD:10053728
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:13503333
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:5508216
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7771591
G Arpc3 actin related protein 2/3 complex, subunit 3 JBrowse link 12 39,653,951 39,667,817 RGD:11049454
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:13592920
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:10053605
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:10450518
RGD:11554173
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor JBrowse link 4 113,887,030 113,890,103 RGD:8554872
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:6482706
G Bag5 BAG cochaperone 5 JBrowse link 6 136,180,640 136,185,651 RGD:11554173
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1331525
RGD:8554872
RGD:11554173
RGD:10059346
RGD:8657025
G Bglap bone gamma-carboxyglutamate protein JBrowse link 2 187,741,770 187,748,445 RGD:7207224
G Bst1 bone marrow stromal cell antigen 1 JBrowse link 14 71,798,218 71,814,540 RGD:11554173
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13503345
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13503345
G Cast calpastatin JBrowse link 2 1,452,111 1,561,669 RGD:5509800
RGD:5683320
G Cck cholecystokinin JBrowse link 8 130,120,525 130,127,515 RGD:1626086
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:2314505
G Ceacam6 CEA cell adhesion molecule 6 JBrowse link 1 81,683,500 81,701,230 RGD:11554173
G Cntnap2 contactin associated protein 2 JBrowse link 4 74,700,539 77,025,463 RGD:11554173
G Col19a1 collagen type XIX alpha 1 chain JBrowse link 9 30,508,003 30,864,836 RGD:11554173
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:13592920
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11554173
G Crh corticotropin releasing hormone JBrowse link 2 104,459,999 104,461,863 RGD:5508835
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6482307
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:5147678
RGD:5147681
RGD:5147679
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:11554173
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:11554173
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:5129515
RGD:8554872
RGD:1358583
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:10398811
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5129231
RGD:11554173
RGD:4139893
RGD:5129121
G Ddit4 DNA-damage-inducible transcript 4 JBrowse link 20 29,509,283 29,511,382 RGD:11554173
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit JBrowse link 5 156,668,924 156,676,036 RGD:8554872
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:2306834
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:2306834
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:10450845
RGD:8554872
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 JBrowse link 5 120,330,372 120,492,515 RGD:10450521
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:11554173
G Draxin dorsal inhibitory axon guidance protein JBrowse link 5 164,913,085 164,943,012 RGD:11554173
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:7248455
RGD:11554173
RGD:7248595
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311585
RGD:11554173
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:5686418
RGD:5686419
G Drd5 dopamine receptor D5 JBrowse link 14 77,220,579 77,222,006 RGD:5686418
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:11554173
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:10059679
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:2289955
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 JBrowse link 6 1,428,845 1,466,193 RGD:10395348
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:13592920
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:5687197
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:5490167
RGD:5688390
G Ephx2 epoxide hydrolase 2 JBrowse link 15 42,757,241 42,794,211 RGD:5688390
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:10400901
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:2289955
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508776
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:12903948
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2290172
RGD:12903948
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:11554173
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:10450518
RGD:8554872
G Fcer2 Fc fragment of IgE receptor II JBrowse link 12 2,233,772 2,245,324 RGD:11554173
G Fez1 fasciculation and elongation protein zeta 1 JBrowse link 8 39,305,128 39,350,270 RGD:13208826
G Fgb fibrinogen beta chain JBrowse link 2 182,028,044 182,035,026 RGD:11554173
G Fgf20 fibroblast growth factor 20 JBrowse link 16 55,152,748 55,159,352 RGD:8554872
G Gak cyclin G associated kinase JBrowse link 14 2,100,104 2,174,332 RGD:11554173
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:5508422
RGD:8554872
RGD:12791016
RGD:11554173
RGD:10450521
RGD:10450518
RGD:5508429
RGD:5508427
RGD:5508425
G Gdf5 growth differentiation factor 5 JBrowse link 3 151,482,672 151,487,129 RGD:12738227
RGD:12738228
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:6218968
RGD:11554173
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:11554173
G Gigyf2 GRB10 interacting GYF protein 2 JBrowse link 9 94,425,191 94,550,431 RGD:13592920
G Gjc2 gap junction protein, gamma 2 JBrowse link 10 45,526,740 45,535,520 RGD:13208520
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:13504666
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11554173
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 1 219,536,220 219,544,329 RGD:5685370
G Grk3 G protein-coupled receptor kinase 3 JBrowse link 12 49,626,871 49,750,389 RGD:5685370
G Grk5 G protein-coupled receptor kinase 5 JBrowse link 1 282,265,371 282,467,842 RGD:5688382
RGD:5685370
RGD:5688384
G Grk6 G protein-coupled receptor kinase 6 JBrowse link 17 9,705,917 9,721,921 RGD:5684916
RGD:5685370
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:10401642
RGD:10401644
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:10045553
G Gsta4 glutathione S-transferase alpha 4 JBrowse link 8 85,497,557 85,514,732 RGD:5687772
RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:5148019
RGD:11554173
RGD:7488959
RGD:5490167
G Gsto1 glutathione S-transferase omega 1 JBrowse link 1 267,607,437 267,617,387 RGD:1358651
RGD:5490299
G Gsto2 glutathione S-transferase omega 2 JBrowse link 1 267,617,517 267,640,455 RGD:5490299
RGD:1358651
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:1358669
RGD:11554173
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:5490165
G Hbb hemoglobin subunit beta JBrowse link 1 168,971,269 168,972,680 RGD:10449046
G Hbg1 hemoglobin subunit gamma 1 JBrowse link 1 168,992,841 168,994,219 RGD:11554173
G Hcn3 hyperpolarization-activated cyclic nucleotide-gated potassium channel 3 JBrowse link 2 188,458,851 188,471,916 RGD:9693679
G Hfe homeostatic iron regulator JBrowse link 17 43,661,276 43,669,327 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:5508459
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:11554173
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:5509775
RGD:5509778
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:10402545
RGD:10402753
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:11554173
G Hspa4 heat shock protein family A (Hsp70) member 4 JBrowse link 10 38,601,624 38,642,397 RGD:5686884
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6218982
RGD:6480228
RGD:6480203
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link 18 27,731,072 27,749,235 RGD:6784528
RGD:11554173
RGD:6784531
RGD:6784530
RGD:6784529
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:10402846
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:5683633
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:5688367
RGD:8554872
RGD:13592920
RGD:5688714
RGD:5688395
RGD:5688394
RGD:5688393
RGD:5688392
RGD:5688381
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:13452383
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:5686429
RGD:11554173
RGD:5129515
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5129515
RGD:11554173
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1358742
RGD:7175549
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:11554173
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:11554173
G Kcnj4 potassium inwardly-rectifying channel, subfamily J, member 4 JBrowse link 7 120,717,378 120,744,602 RGD:11554173
G Kcnn2 potassium calcium-activated channel subfamily N member 2 JBrowse link 18 39,331,894 39,479,574 RGD:13592920
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:1358597
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:6483033
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:10053631
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:8554872
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508399
RGD:8554872
RGD:11554173
RGD:10450521
RGD:10450518
RGD:5508420
RGD:5508416
RGD:5508415
RGD:5508409
RGD:5508408
RGD:5508406
RGD:5508404
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:11554173
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:11554173
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:2316771
RGD:11554173
RGD:1358484
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:11554173
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:11554173
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:8158095
RGD:11554173
RGD:8158107
RGD:8158106
RGD:8158096
G Mir1 microRNA 1 JBrowse link 18 2,054,933 2,055,019 RGD:10755488
G Mir106a microRNA 106a JBrowse link X 140,117,891 140,117,968 RGD:10450788
G Mir132 microRNA 132 JBrowse link 10 62,014,995 62,015,095 RGD:10450788
G Mir181c microRNA 181c JBrowse link 19 25,290,211 25,290,316 RGD:11554173
G Mir19b1 microRNA 19b-1 JBrowse link 15 100,180,464 100,180,550 RGD:10755479
G Mir22 microRNA 22 JBrowse link 10 62,299,592 62,299,686 RGD:10755488
G Mir29b1 microRNA 29b-1 JBrowse link 4 58,344,310 58,344,390 RGD:10755479
G Mir301a microRNA 301a JBrowse link 10 74,417,746 74,417,845 RGD:10755479
G Mir34b microRNA 34b JBrowse link 8 55,492,542 55,492,625 RGD:10755477
G Mir34c microRNA 34c JBrowse link 8 55,492,024 55,492,100 RGD:10755477
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:5490292
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:5148018
RGD:8554872
RGD:8657117
RGD:5508706
G Mt-nd2 mitochondrially encoded NADH dehydrogenase 2 JBrowse link MT 3,904 4,942 RGD:2302313
RGD:5507832
G Mt-nd3 mitochondrially encoded NADH dehydrogenase 3 JBrowse link MT 9,451 9,798 RGD:5491206
RGD:8554872
RGD:5687692
RGD:5687691
G Mt-nd4 mitochondrially encoded NADH dehydrogenase 4 JBrowse link MT 10,160 11,537 RGD:5507832
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:11554173
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:11554173
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:5508183
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:9681444
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:2303766
G Ncapg2 non-SMC condensin II complex, subunit G2 JBrowse link 6 144,291,313 144,362,454 RGD:11554173
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link 16 21,275,311 21,282,246 RGD:13504667
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 JBrowse link 1 264,298,671 264,303,712 RGD:13504667
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 JBrowse link 9 69,919,863 69,953,182 RGD:6484690
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link 2 46,372,488 46,476,162 RGD:6484691
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link 9 113,875,718 113,900,169 RGD:2302386
G Nectin2 nectin cell adhesion molecule 2 JBrowse link 1 80,631,449 80,666,617 RGD:11554173
G Nedd8 NEDD8 ubiquitin like modifier JBrowse link 15 34,340,607 34,352,673 RGD:1549458
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:11554173
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:10413896
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:5132632
RGD:11554173
RGD:1358519
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5509573
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:11554173
G Nqo2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link 17 32,131,847 32,158,559 RGD:11073691
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1358553
RGD:8554872
RGD:13592920
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9743906
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:8657142
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:13432580
G Orc6 origin recognition complex, subunit 6 JBrowse link 19 27,457,541 27,464,804 RGD:8554872
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1601073
RGD:8554872
RGD:12880446
RGD:11554173
RGD:10450523
G Park7em1Sage parkinson protein 7; zinc finger nuclease induced mutant 1, Sigma Advanced Genetic Engineering Labs RGD:12880446
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:5510024
RGD:5510021
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:10003114
G Phactr2 phosphatase and actin regulator 2 JBrowse link 1 7,352,050 7,633,991 RGD:6483095
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:8554872
RGD:12880446
RGD:11554173
RGD:10450521
RGD:10450518
G Pink1em1Sage PTEN induced putative kinase 1; zinc finger nuclease induced mutant 1, Sigma Advanced Genetic Engineering Labs RGD:12880446
G Pitx3 paired-like homeodomain 3 JBrowse link 1 265,886,766 265,899,947 RGD:11535079
RGD:13592920
G Pla2g6 phospholipase A2 group VI JBrowse link 7 120,519,479 120,559,716 RGD:6482733
RGD:6482734
G Polg DNA polymerase gamma, catalytic subunit JBrowse link 1 141,172,117 141,188,893 RGD:8694175
RGD:8694203
RGD:8694201
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:6484270
RGD:11554173
RGD:6484271
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B JBrowse link 10 82,800,704 82,816,735 RGD:10043801
G Ppp2ca protein phosphatase 2 catalytic subunit alpha JBrowse link 10 37,534,449 37,554,861 RGD:8693390
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:737763
RGD:11554173
RGD:13432567
RGD:13432563
RGD:13432207
RGD:10450521
RGD:10450518
RGD:8693409
RGD:10413859
RGD:9693725
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:10044022
G Rpl14 ribosomal protein L14 JBrowse link 8 129,240,528 129,243,400 RGD:11554173
G Rpl23a ribosomal protein L23a JBrowse link 10 65,441,295 65,443,981 RGD:11554173
G Rpl6 ribosomal protein L6 JBrowse link 12 40,877,578 40,882,032 RGD:11554173
G Rps8 ribosomal protein S8 JBrowse link 5 136,020,941 136,023,511 RGD:11554173
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor JBrowse link 10 3,170,387 3,214,648 RGD:13592920
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:5490158
RGD:11554173
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147576
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508763
RGD:5508766
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:13504667
G Septin14 septin 14 JBrowse link 12 30,600,162 30,623,173 RGD:13504669
G Septin4 septin 4 JBrowse link 10 74,860,068 74,884,196 RGD:13504670
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:5688403
RGD:5688713
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:5131086
RGD:11554173
RGD:5129143
RGD:5131167
RGD:5131163
RGD:5131165
G Slc30a10 solute carrier family 30, member 10 JBrowse link 13 103,396,295 103,406,759 RGD:11554173
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:11554173
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1302527
RGD:11554173
RGD:8554872
RGD:13506723
RGD:13506646
RGD:10450521
RGD:10450518
RGD:10450517
RGD:6480197
RGD:6480196
RGD:6480094
RGD:6478794
RGD:730239
G Sncaip synuclein, alpha interacting protein JBrowse link 18 47,739,284 47,877,679 RGD:8554872
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:6478793
RGD:6480095
G Sncg synuclein, gamma JBrowse link 16 10,722,110 10,726,648 RGD:6480095
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655933
RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
RGD:13464352
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:13592920
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 10 13,128,820 13,162,956 RGD:11038728
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:10450521
G Taldo1 transaldolase 1 JBrowse link 1 214,375,555 214,385,886 RGD:11554173
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:5687172
RGD:5687183
G Tcn2 transcobalamin 2 JBrowse link 14 84,173,992 84,189,299 RGD:11060125
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 8 119,215,266 119,220,909 RGD:11561895
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:14389730
RGD:13592920
RGD:6771185
RGD:6771184
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:5129120
RGD:11554173
RGD:5129121
RGD:5128616
RGD:5128607
RGD:2289955
G Tmem230 transmembrane protein 230 JBrowse link 3 124,870,867 124,879,274 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5130931
G Tnk2 tyrosine kinase, non-receptor, 2 JBrowse link 11 71,348,726 71,388,520 RGD:8554872
G Tnr tenascin R JBrowse link 13 77,602,249 77,678,385 RGD:8554872
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:11554173
G Twnk twinkle mtDNA helicase JBrowse link 1 264,756,060 264,762,892 RGD:13592920
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:8554872
RGD:13592920
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:13504672
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:13217419
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685606
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link 8 73,682,814 73,843,290 RGD:8554872
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:8554872
RGD:11554173
RGD:10450845
RGD:10450521
RGD:10450518
Parkinson's disease 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:7240710
RGD:8554872
Parkinson's Disease 11 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gigyf2 GRB10 interacting GYF protein 2 JBrowse link 9 94,425,191 94,550,431 RGD:8554872
RGD:7240710
Parkinson's Disease 13 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:7240710
RGD:8554872
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:8554872
Parkinson's disease 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g6 phospholipase A2 group VI JBrowse link 7 120,519,479 120,559,716 RGD:7240710
RGD:8554872
Parkinson's disease 15 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:7240710
RGD:8554872
RGD:11554173
Parkinson's disease 17 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:7240710
RGD:8554872
Parkinson's disease 19A term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 JBrowse link 5 120,330,372 120,492,515 RGD:7240710
RGD:8554872
Parkinson's disease 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pacrg parkin coregulated JBrowse link 1 50,070,273 50,491,323 RGD:8554872
G Podxl podocalyxin-like JBrowse link 4 58,829,049 58,893,353 RGD:8554872
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:7240710
RGD:8554872
Parkinson's disease 20 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfap298 cilia and flagella associated protein 298 JBrowse link 11 31,094,103 31,103,487 RGD:8554872
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:7240710
RGD:8554872
Parkinson's disease 21 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:7240710
RGD:8554872
Parkinson's disease 22 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 JBrowse link 9 101,388,148 101,388,819 RGD:7240710
RGD:8554872
Parkinson's disease 23 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link 8 73,682,814 73,843,290 RGD:8554872
RGD:7240710
Parkinson's disease 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:7240710
Parkinson's Disease 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:8554872
Parkinson's disease 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-nd5 mitochondrially encoded NADH dehydrogenase 5 JBrowse link MT 11,736 13,565 RGD:8554872
G Mt-nd6 mitochondrially encoded NADH dehydrogenase 6 JBrowse link MT 13,543 14,061 RGD:8554872
G Mtfp1 mitochondrial fission process 1 JBrowse link 14 84,330,223 84,334,063 RGD:12880394
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:8554872
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:7240710
RGD:8554872
RGD:11554173
Parkinson's disease 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:7240710
RGD:8554872
RGD:11554173
Parkinson's disease 8 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508405
RGD:8554872
RGD:7240710
Parkinson's Disease, Mitochondrial term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:8554872
G Fmc1 formation of mitochondrial complex V assembly factor 1 JBrowse link 4 66,276,835 66,284,868 RGD:11554173
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link 9 113,875,718 113,900,169 RGD:8554872
Parkinsonism with Spasticity, X-Linked term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6ap2 ATPase H+ transporting accessory protein 2 JBrowse link X 11,137,889 11,164,854 RGD:7240710
RGD:8554872
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:8554872
Parkinsonism-Dystonia, Infantile term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:8554872
RGD:11554173
Parkinsonism-Dystonia, Infantile, 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:7240710
RGD:8554872
Parkinsonism-Dystonia, Infantile, 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:8554872
RGD:7240710
Progressive Supranuclear Palsy Atypical term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:7240710
Shy-Drager Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Avp arginine vasopressin JBrowse link 3 123,117,482 123,119,460 RGD:11554173
G Coq2 coenzyme Q2, polyprenyltransferase JBrowse link 14 10,581,102 10,601,093 RGD:8554872
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:8554872
spinocerebellar ataxia type 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn2 ataxin 2 JBrowse link 12 40,264,601 40,335,637 RGD:7240710
RGD:8554872
Spinocerebellar Ataxia, X-Linked 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb7 ATP binding cassette subfamily B member 7 JBrowse link X 75,150,511 75,291,950 RGD:8554872
G Amer1 APC membrane recruitment protein 1 JBrowse link X 64,686,620 64,702,504 RGD:8554872
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 JBrowse link X 157,236,400 157,312,028 RGD:7240710
RGD:8554872
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:8554872
G Nhsl2 NHS-like 2 JBrowse link X 71,895,202 71,980,019 RGD:8554872
G Phka1 phosphorylase kinase regulatory subunit alpha 1 JBrowse link X 72,377,020 72,515,385 RGD:8554872
G Rtl9 retrotransposon Gag like 9 JBrowse link X 114,367,028 114,379,646 RGD:8554872
striatonigral degeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:13592920
G Pde8b phosphodiesterase 8B JBrowse link 2 24,718,548 24,955,533 RGD:13592920
Striatonigral Degeneration, Childhood-Onset term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vac14 VAC14 component of PIKFYVE complex JBrowse link 19 40,927,007 41,029,206 RGD:8554872
RGD:7240710
Striatonigral Degeneration, Infantile term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il4i1 interleukin 4 induced 1 JBrowse link 1 100,811,727 100,836,901 RGD:8554872
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:7240710
RGD:8554872
Striatonigral Degeneration, Infantile, Mitochondrial term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:8554872
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15502
    disease of anatomical entity 14856
      nervous system disease 10270
        neurodegenerative disease 2942
          synucleinopathy 274
            Parkinson's disease + 250
            multiple system atrophy + 29
Path 2
Term Annotations click to browse term
  disease 15502
    disease of anatomical entity 14856
      nervous system disease 10270
        central nervous system disease 8409
          neurodegenerative disease 2942
            synucleinopathy 274
              Parkinson's disease + 250
              multiple system atrophy + 29
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.