RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: hepatocellular adenoma
Accession: DOID:0050868
browse the term
Definition: A liver benign neoplasm that is located_in liver cells and that is composed_of epithelial tissue in which tumor cells form glands or glandlike structures. (DO)
Synonyms: exact_synonym: Benign Hepatoma; benign hepatomas; hepatocellular adenomas; liver cell adenoma; liver cell adenomas
primary_id: MESH:D018248
For additional species annotation, visit the
Alliance of Genome Resources .
G
A2m
alpha-2-macroglobulin
IEP ISO
mRNA,protein:increased expression:liver: CTD Direct Evidence: marker/mechanism
CTD
PMID:15509519 , PMID:15509519
RGD:1358261
NCBI chr 4:154,309,426...154,359,138
Ensembl chr 4:154,309,426...154,359,137
G
Carm1
coactivator-associated arginine methyltransferase 1
IEP
mRNA,protein:increased expression:liver:
RGD
PMID:23912631
RGD:9586718
NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
G
Cdkn1b
cyclin-dependent kinase inhibitor 1B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17620307
NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
G
Ctnnb1
catenin beta 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21147764
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
G
Cyp2e1
cytochrome P450, family 2, subfamily e, polypeptide 1
treatment
IEP
RGD
PMID:23543859
RGD:14700918
NCBI chr 1:213,511,892...213,522,195
Ensembl chr 1:213,511,874...213,535,542
G
Cyp3a23-3a1
cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:10959800
NCBI chr12:11,053,888...11,082,742
Ensembl chr12:11,655,402...11,733,136
G
Hnf1a
HNF1 homeobox A
susceptibility
IAGP
DNA:loss of heterozygosity, mutations:multiple DNA:frameshift mutation, non-sense mutation:cds:R229X, G55fsX57 (human)
RGD
PMID:12355088 , PMID:14598263
RGD:14700683 , RGD:14700774
NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
G
Hp
haptoglobin
IEP
RGD
PMID:10569800
RGD:1626391
NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804
G
Hras
HRas proto-oncogene, GTPase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:8200073
NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
G
Kras
KRAS proto-oncogene, GTPase
induced
IAGP
aflatoxin B1 induced:DNA:transversion,transition mutations:cds:
RGD
PMID:8446626
RGD:11568697
NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
G
Mki67
marker of proliferation Ki-67
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:31939706
NCBI chr 1:207,993,895...208,020,454
Ensembl chr 1:207,993,895...208,020,454
G
Nr1h4
nuclear receptor subfamily 1, group H, member 4
ISO
RGD
PMID:17183066
RGD:14696794
NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
G
Nr1i3
nuclear receptor subfamily 1, group I, member 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:25656644
NCBI chr13:89,585,072...89,591,278
Ensembl chr13:89,586,283...89,591,277
G
Pten
phosphatase and tensin homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:27022031 , PMID:15199412
RGD:1302555
NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
G
Ptpn11
protein tyrosine phosphatase, non-receptor type 11
ISS
MouseDO
NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
G
Tmem70
transmembrane protein 70
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:27914986
NCBI chr 5:2,019,852...2,037,038
Ensembl chr 5:2,019,852...2,037,038
G
Ube2e2
ubiquitin-conjugating enzyme E2E 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:27914986
NCBI chr15:7,402,210...7,928,320
Ensembl chr15:7,871,497...7,927,939
G
Hnf1a
HNF1 homeobox A
ISO
ClinVar Annotator: match by term: Hepatic adenomas, familial
OMIM ClinVar
PMID:8866553 PMID:8945470 PMID:9032114 PMID:9045858 PMID:9075818 PMID:9166684 PMID:9313763 PMID:9439666 PMID:10333057 PMID:10447526 PMID:10754480 PMID:11058894 PMID:11315851 PMID:12050210 PMID:12355088 PMID:12530534 PMID:12574234 PMID:12618559 PMID:15649945 PMID:15928245 PMID:17054605 PMID:17407387 PMID:17440016 PMID:17573900 PMID:17937063 PMID:17989309 PMID:18414213 PMID:18672310 PMID:21051477 PMID:21628466 PMID:23551881 PMID:23607861 PMID:25174781 PMID:26467025 PMID:28862987 PMID:29417725 PMID:30814848
NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all