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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:urofacial syndrome
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Accession:DOID:0050816 term browser browse the term
Definition:A syndrome that is characterized by inverted facial expressions in association with a severe and early-onset form of dysfunctional urinary voiding. (DO)
Synonyms:exact_synonym: Inverted smile and occult neuropathic bladder;   Ochoa syndrome;   UFS;   hydronephrosis with peculiar facial expression;   hydronephrosis-inverted smile;   inverted smile-neurogenic bladder;   partial facial palsy with urinary abnormalities;   urofacial Ochoa's syndrome
 primary_id: MESH:C536480
 xref: GARD:2781;   OMIM:PS236730;   ORDO:2704
For additional species annotation, visit the Alliance of Genome Resources.


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urofacial syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpse2 heparanase 2 (inactive) ISO CTD Direct Evidence: marker/mechanism CTD PMID:20560209 NCBI chr 1:241,582,904...242,284,348
Ensembl chr 1:241,583,187...242,246,118
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
JBrowse link
Urofacial Syndrome 1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpse2 heparanase 2 (inactive) ISO ClinVar Annotator: match by term: Urofacial syndrome 1 OMIM
ClinVar
PMID:11446407 PMID:19669792 PMID:19839856 PMID:20560209 PMID:20560210 More... NCBI chr 1:241,582,904...242,284,348
Ensembl chr 1:241,583,187...242,246,118
JBrowse link
Urofacial Syndrome 2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 ISO ClinVar Annotator: match by term: Urofacial syndrome 2
ClinVar Annotator: match by OMIM:615112
OMIM
ClinVar
PMID:23313374 PMID:25741868 NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17207
    syndrome 8126
      urofacial syndrome 2
        Urofacial Syndrome 1 1
        Urofacial Syndrome 2 1
Path 2
Term Annotations click to browse term
  disease 17207
    Developmental Disease 10923
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 9459
        genetic disease 8962
          monogenic disease 7129
            autosomal genetic disease 6277
              autosomal recessive disease 3443
                urofacial syndrome 2
                  Urofacial Syndrome 1 1
                  Urofacial Syndrome 2 1
paths to the root