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ONTOLOGY REPORT - ANNOTATIONS
Term:AGAT deficiency
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Accession:DOID:0050712 term browser browse the term
Definition:An amino acid metabolic disorder that has_material_basis_in a mutation in the GATM gene resulting in deficiency of arginine:glycine amidinotransferase which then limits creatine synthesis. (DO)
Synonyms:exact_synonym: Arginine:Glycine Amidinotransferase Deficiency;   CCDS3;   Creatine Deficiency Syndrome due to AGAT Deficiency;   GATM deficiency;   L-Arginine:Glycine Aminidotransferase Deficiency;   cerebral creatine deficiency syndrome 3
 primary_id: MESH:C567192
 alt_id: OMIM:612718;   RDO:0015333
For additional species annotation, visit the Alliance of Genome Resources.

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AGAT deficiency term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Duox1 dual oxidase 1 JBrowse link 3 114,251,794 114,286,827 RGD:8554872
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:8554872
G Duoxa1 dual oxidase maturation factor 1 JBrowse link 3 114,241,057 114,251,720 RGD:8554872
G Duoxa2 dual oxidase maturation factor 2 JBrowse link 3 114,236,718 114,240,086 RGD:8554872
G Gatm glycine amidinotransferase JBrowse link 3 114,711,570 114,728,155 RGD:7240710
RGD:8554872
G Shf Src homology 2 domain containing F JBrowse link 3 114,288,021 114,307,334 RGD:8554872
G Slc28a2 solute carrier family 28 member 2 JBrowse link 3 114,355,003 114,647,382 RGD:8554872
G Sord sorbitol dehydrogenase JBrowse link 3 114,176,127 114,207,368 RGD:8554872
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:8554872
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15502
    syndrome 5379
      cerebral creatine deficiency syndrome 12
        AGAT deficiency 9
Path 2
Term Annotations click to browse term
  disease 15502
    disease of anatomical entity 14856
      nervous system disease 10270
        central nervous system disease 8409
          brain disease 7762
            disease of mental health 5617
              developmental disorder of mental health 2797
                specific developmental disorder 1964
                  communication disorder 214
                    language disorder 138
                      speech disorder 50
                        AGAT deficiency 9
paths to the root

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