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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:total volumetric bone mineral density
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Accession:CMO:0001728 term browser browse the term
Definition:Measurement of the mineral mass per unit volume of an entire bone, the hard, rigid form of connective tissue constituting most of the skeleton of vertebrates and composed chiefly of calcium salts, including any and all relevant subdivisions of that bone.
Synonyms:related_synonym: total vBMD;   total volumetric BMD


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total volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd11 Bone mineral density QTL 11 IDA 11.0 RGD PMID:16461031 RGD:1578307 NCBI chr 4:92,406,430...137,406,430 JBrowse link
Q Bmd14 Bone mineral density QTL 14 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 6:33,328,841...78,328,841 JBrowse link
Q Bmd17 Bone mineral density QTL 17 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr15:25,285,835...104,695,021 JBrowse link
Q Bmd19 Bone mineral density QTL 19 IDA 1.0E-4 10.7 RGD PMID:18282130 RGD:2293456
Q Bmd20 Bone mineral density QTL 20 IDA 2.0E-4 4.3 RGD PMID:18282130 RGD:2293456 NCBI chr 6:1...25,740,059 JBrowse link
Q Bmd21 Bone mineral density QTL 21 IDA 3.0E-4 4.2 RGD PMID:18282130 RGD:2293456
Q Bmd22 Bone mineral density QTL 22 IDA 1.0E-4 4.9 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd23 Bone mineral density QTL 23 IDA 1.0E-4 7.3 RGD PMID:18282130 RGD:2293456
Q Bmd26 Bone mineral density QTL 26 IDA 2.0E-4 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr12:1...38,635,130 JBrowse link
Q Bmd30 Bone mineral density QTL 30 IDA 1.0E-4 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd6 Bone mineral density QTL 6 IDA 12.2 femoral neck total volumetric bone mineral density RGD PMID:16461031 RGD:1578307
Q Bmd72 Bone mineral density QTL 72 IDA 1.0E-4 2.5 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bmd74 Bone mineral density QTL 74 IDA 1.0E-4 4.0 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 1:91,302,413...136,302,413 JBrowse link
Q Bmd75 Bone mineral density QTL 75 IDA 1.0E-4 4.1 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 2:218,051,934...251,712,708 JBrowse link
Q Bmd76 Bone mineral density QTL 76 IDA 1.0E-4 3.6 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bmd78 Bone mineral density QTL 78 IDA 1.0E-4 3.1 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 5:149,661,912...166,600,247 JBrowse link
Q Bmd79 Bone mineral density QTL 79 IDA 1.0E-4 2.3 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 7:96,700,404...118,618,702 JBrowse link
Q Bmd80 Bone mineral density QTL 80 IDA 1.0E-4 3.2 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr10:20,110,614...65,110,614 JBrowse link
Q Bmd81 Bone mineral density QTL 81 IDA 4.3 RGD PMID:20699128 RGD:4889918 NCBI chr 3:59,119,402...70,710,963 JBrowse link
Q Bmd88 Bone mineral density QTL 88 IDA 4.0 update to femur specific term RGD PMID:18282130 RGD:2293456 NCBI chr 9:31,250,432...65,651,574 JBrowse link
Q Bmd9 Bone mineral QTL density 9 IDA 5.0 RGD PMID:16461031 RGD:1578307 NCBI chr 2:5,736,325...50,736,325 JBrowse link
compact volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd10 Bone mineral density QTL 10 IDA 5.4 femoral neck cortical volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 2:175,931,416...220,931,416 JBrowse link
Q Bmd12 Bone mineral density QTL 12 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 4:137,430,611...182,430,611 JBrowse link
Q Bmd16 Bone mineral density QTL 16 IDA 6.2 RGD PMID:16461031 RGD:1578307 NCBI chr10:97,202,388...107,556,066 JBrowse link
Q Bmd24 Bone mineral density QTL 24 IDA 1.0E-4 8.9 RGD PMID:18282130 RGD:2293456
Q Bmd25 Bone mineral density QTL 25 IDA 1.0E-4 7.1 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd69 Bone mineral density QTL 69 IDA 1.0E-4 4.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:5,293,229...34,184,556 JBrowse link
Q Bmd7 Bone mineral density QTL 7 IDA 14.2 femoral neck cortical volumetric bone mineral density RGD PMID:16461031 RGD:1578307
Q Bmd70 Bone mineral density QTL 70 IDA 1.0E-4 3.6 RGD PMID:19113924 RGD:2312767
Q Bmd71 Bone mineral density QTL 71 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bmd73 Bone mineral density QTL 73 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bmd77 Bone mineral density QTL 77 IDA 1.0E-4 2.2 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
trabecular volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd13 Bone mineral density QTL 13 IDA 4.9 RGD PMID:16461031 RGD:1578307 NCBI chr 5:69,474,415...114,474,415 JBrowse link
Q Bmd15 Bone mineral density QTL 15 IDA 5.2 femoral neck trabecular volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 7:10,517,086...62,346,019 JBrowse link
Q Bmd18 Bone mineral density QTL 18 IDA 5.2 RGD PMID:16461031 RGD:1578307 NCBI chr15:25,285,835...104,695,021 JBrowse link
Q Bmd27 Bone mineral density QTL 27 IDA 1.0E-4 6.6 RGD PMID:18282130 RGD:2293456 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Q Bmd28 Bone mineral density QTL 28 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,360,057...27,233,623 JBrowse link
Q Bmd8 Bone mineral density QTL 8 IDA 4.9 femoral neck trabecular volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 1:51,940,904...101,229,020 JBrowse link

Related Phenotype Data for Term "total volumetric bone mineral density" (CMO:0001728)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      skeleton morphological measurement 201
        bone morphological measurement 179
          bone mineral morphological measurement 78
            volumetric bone mineral density 66
              total volumetric bone mineral density 38
                compact volumetric bone mineral density 11
                trabecular volumetric bone mineral density 6
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    musculoskeletal system measurement 297
      skeletal system measurement 235
        skeleton morphological measurement 201
          bone morphological measurement 179
            bone mineral morphological measurement 78
              volumetric bone mineral density 66
                total volumetric bone mineral density 38
                  compact volumetric bone mineral density 11
                  trabecular volumetric bone mineral density 6
paths to the root