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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:bone measurement
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Accession:CMO:0001550 term browser browse the term
Definition:A value resulting from the quantification of a morphological or physiological parameter of bone, the hard, rigid form of connective tissue constituting most of the skeleton of vertebrates and composed chiefly of calcium salts.
Synonyms:xref: EFO:0004512


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bone mineral content term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd82 Bone mineral density QTL 82 IDA 2.8 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 2:61,051,541...105,724,065 JBrowse link
Q Bmd83 Bone mineral density QTL 82 IDA 4.8 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 6:53,684,921...98,684,921 JBrowse link
Q Bmd84 Bone mineral density QTL 84 IDA 4.1 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 8:51,589,699...58,991,895 JBrowse link
Q Bmd87 Bone mineral density QTL 87 IDA 5.1 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 4:35,113,290...80,113,290 JBrowse link
bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd40 Bone mineral density QTL 40 IDA 1.0E-4 15.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Q Bmd42 Bone mineral density QTL 42 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bmd47 Bone mineral density QTL 47 IDA 1.0E-4 6.6 RGD PMID:18707222 RGD:2300109
Q Bmd49 Bone mineral density QTL 49 IDA 1.0E-4 4.8 RGD PMID:18707222 RGD:2300109
Q Bmd51 Bone mineral density QTL 51 IDA 1.0E-4 11.7 RGD PMID:18707222 RGD:2300109
Q Bmd67 Bone mineral density QTL 67 IDA 1.0E-4 4.8 RGD PMID:18707222 RGD:2300109 NCBI chr18:1...34,566,578 JBrowse link
Q Bmd85 Bone mineral density QTL 85 IDA 0.024 4.7 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 2:61,051,541...105,724,065 JBrowse link
Q Bmd86 Bone mineral density QTL 86 IDA 3.7 update to tibia specific term RGD PMID:21818327 RGD:5684953 NCBI chr 4:57,613,242...102,613,242 JBrowse link
bone polar moment of inertia term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss57 Bone structure and strength QTL 57 IDA 1.0E-4 3.7 update to tibia specific term RGD PMID:19113924 RGD:2312767
Q Bss63 Bone structure and strength QTL 63 IDA 1.0E-4 1.4 update to tibia specific term RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bss69 Bone structure and strength QTL 69 IDA 1.0E-4 3.5 update to tibia specific term RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
bone trabecular cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss14 Bone structure and strength QTL 14 IDA 16.4 RGD PMID:16461031 RGD:1578307 NCBI chr 4:88,883,695...133,883,695 JBrowse link
Q Bss16 Bone structure and strength QTL 16 IDA 4.4 RGD PMID:16461031 RGD:1578307 NCBI chr 6:33,328,841...78,328,841 JBrowse link
Q Bss19 Bone structure and strength QTL 19 IDA 4.3 RGD PMID:16461031 RGD:1578307 NCBI chr15:25,285,835...104,695,021 JBrowse link
Q Bss9 Bone structure and strength QTL 9 IDA 6.3 RGD PMID:16461031 RGD:1578307
compact volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd10 Bone mineral density QTL 10 IDA 5.4 femoral neck cortical volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 2:175,931,416...220,931,416 JBrowse link
Q Bmd12 Bone mineral density QTL 12 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 4:137,430,611...182,430,611 JBrowse link
Q Bmd16 Bone mineral density QTL 16 IDA 6.2 RGD PMID:16461031 RGD:1578307 NCBI chr10:97,202,388...107,556,066 JBrowse link
Q Bmd24 Bone mineral density QTL 24 IDA 1.0E-4 8.9 RGD PMID:18282130 RGD:2293456
Q Bmd25 Bone mineral density QTL 25 IDA 1.0E-4 7.1 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd69 Bone mineral density QTL 69 IDA 1.0E-4 4.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:5,293,229...34,184,556 JBrowse link
Q Bmd7 Bone mineral density QTL 7 IDA 14.2 femoral neck cortical volumetric bone mineral density RGD PMID:16461031 RGD:1578307
Q Bmd70 Bone mineral density QTL 70 IDA 1.0E-4 3.6 RGD PMID:19113924 RGD:2312767
Q Bmd71 Bone mineral density QTL 71 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bmd73 Bone mineral density QTL 73 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bmd77 Bone mineral density QTL 77 IDA 1.0E-4 2.2 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
femoral neck cortical cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd31 Bone mineral density QTL 31 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,360,057...27,233,623 JBrowse link
Q Bmd38 Bone mineral density QTL 38 IDA 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr 5:13,731,153...43,590,997 JBrowse link
Q Bss10 Bone structure and strength QTL 10 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr 1:51,940,904...168,768,703 JBrowse link
Q Bss11 Bone structure and strength QTL 11 IDA 4.7 RGD PMID:16461031 RGD:1578307 NCBI chr 2:169,358,774...214,358,774 JBrowse link
Q Bss17 Bone structure and strength QTL 17 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 9:3,605,355...21,031,556 JBrowse link
Q Bss21 Bone structure and strength QTL 21 IDA 3.5 RGD PMID:16461031 RGD:1578307 NCBI chr18:12,066,482...85,493,247 JBrowse link
femoral neck cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd29 Bone mineral density QTL 29 IDA 1.0E-4 5.4 RGD PMID:18282130 RGD:2293456
Q Bmd90 Bone mineral density QTL 90 IDA 5.2 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,943,710...94,943,710 JBrowse link
Q Bmd91 Bone mineral density QTL 91 IDA 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr 9:1...31,250,552 JBrowse link
Q Bss12 Bone structure and strength QTL 12 IDA 8.9 RGD PMID:16461031 RGD:1578307
Q Bss20 Bone structure and strength QTL 20 IDA 3.7 RGD PMID:16461031 RGD:1578307 NCBI chr18:12,066,482...85,493,247 JBrowse link
femoral neck polar moment of inertia term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd32 Bone mineral density QTL 32 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456
Q Bmd33 Bone mineral density QTL 33 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bss13 Bone structure and strength QTL 13 IDA 8.0 RGD PMID:16461031 RGD:1578307
femoral neck ultimate force term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd34 Bone mineral density QTL 34 IDA 1.0E-4 8.3 RGD PMID:18282130 RGD:2293456 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Q Bmd35 Bone mineral density QTL 35 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr 4:160,623,982...184,426,481 JBrowse link
Q Bmd36 Bone mineral density QTL 36 IDA 1.0E-4 7.4 RGD PMID:18282130 RGD:2293456
Q Bmd89 Bone mineral density QTL 89 IDA 4.1 RGD PMID:18282130 RGD:2293456
Q Bss117 Bone structure and strength QTL 117 IDA 3.89E-7 6.41 RGD PMID:26297441 RGD:11528619 NCBI chr10:45,446,681...45,933,445 JBrowse link
femoral neck width term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss113 Bone structure and strength QTL 113 IDA 1.7E-10 9.75 RGD PMID:26297441 RGD:11528619 NCBI chr 3:36,888,342...39,639,105 JBrowse link
Q Bss120 Bone structure and strength QTL 120 IDA 2.7E-9 8.55 RGD PMID:26297441 RGD:11528619 NCBI chr17:82,738,633...83,512,324 JBrowse link
Q Bss15 Bone structure and strength QTL 15 IDA 19.6 RGD PMID:16461031 RGD:1578307 NCBI chr 4:88,883,695...133,883,695 JBrowse link
Q Bss18 Bone structure and strength QTL 18 IDA 3.6 RGD PMID:16461031 RGD:1578307 NCBI chr10:97,202,388...107,556,066 JBrowse link
femur cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss22 Bone structure and strength QTL 22 IDA 1.0E-4 33.52 RGD PMID:18158281 RGD:2293455 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bss23 Bone structure and strength QTL 23 IDA 1.0E-4 5.18 RGD PMID:18158281 RGD:2293455 NCBI chr 6:3,239,989...48,239,989 JBrowse link
Q Bss24 Bone structure and strength QTL 24 IDA 1.0E-4 6.71 RGD PMID:18158281 RGD:2293455
Q Bss25 Bone structure and strength QTL 25 IDA 1.0E-4 10.96 RGD PMID:18158281 RGD:2293455
Q Bss26 Bone structure and strength QTL 26 IDA 1.0E-4 4.6 RGD PMID:18158281 RGD:2293455 NCBI chr13:67,635,937...109,350,286 JBrowse link
femur head width term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss115 Bone structure and strength QTL 115 IDA 2.7E-7 6.56 RGD PMID:26297441 RGD:11528619 NCBI chr 8:89,682,560...90,544,636 JBrowse link
femur length term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss116 Bone structure and strength QTL 116 IDA 3.8E-7 6.46 RGD PMID:26297441 RGD:11528619 NCBI chr10:44,679,312...46,132,467 JBrowse link
Q Bss121 Bone structure and strength QTL 121 IDA 1.9E-7 6.72 RGD PMID:26297441 RGD:11528619 NCBI chr20:33,764,124...36,293,651 JBrowse link
femur midshaft cortical cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss111 Bone structure and strength QTL 111 IDA 6.4 RGD PMID:16059631 RGD:1549683 NCBI chr 2:214,404,877...251,712,708 JBrowse link
Q Bss112 Bone structure and strength QTL 112 IDA 7.0 RGD PMID:16059631 RGD:1549683 NCBI chr 5:112,142,946...157,142,946 JBrowse link
Q Bss27 Bone structure and strength QTL 27 IDA 1.0E-4 18.63 RGD PMID:18158281 RGD:2293455 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bss28 Bone structure and strength QTL 28 IDA 1.0E-4 6.79 RGD PMID:18158281 RGD:2293455 NCBI chr 6:3,239,989...48,239,989 JBrowse link
Q Bss29 Bone structure and strength QTL 29 IDA 1.0E-4 5.31 RGD PMID:18158281 RGD:2293455
Q Bss3 Bone structure and strength QTL 3 IDA 11.0 RGD PMID:16059631 RGD:1549683 NCBI chr 4:111,383,604...156,383,604 JBrowse link
femur midshaft polar moment of inertia term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss105 Bone structure and strength QTL 105 IDA 8.1 RGD PMID:16059631 RGD:1549683 NCBI chr 4:111,383,604...156,383,604 JBrowse link
Q Bss2 Bone structure and strength QTL 2 IDA 7.5 RGD PMID:16059631 RGD:1549683 NCBI chr 2:214,404,877...251,712,708 JBrowse link
Q Bss30 Bone structure and strength QTL 30 IDA 1.0E-4 32.65 RGD PMID:18158281 RGD:2293455 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bss31 Bone structure and strength QTL 31 IDA 1.0E-4 5.05 RGD PMID:18158281 RGD:2293455 NCBI chr 6:3,239,989...48,239,989 JBrowse link
Q Bss32 Bone structure and strength QTL 32 IDA 1.0E-4 7.64 RGD PMID:18158281 RGD:2293455
Q Bss33 Bone structure and strength QTL 33 IDA 1.0E-4 9.34 RGD PMID:18158281 RGD:2293455
Q Bss34 Bone structure and strength QTL 34 IDA 1.0E-4 4.61 RGD PMID:18158281 RGD:2293455 NCBI chr13:67,635,937...109,350,286 JBrowse link
Q Bss35 Bone structure and strength QTL 35 IDA 2.0E-4 4.59 RGD PMID:18158281 RGD:2293455
Q Bss4 Bone structure and strength QTL 4 IDA 9.2 RGD PMID:16059631 RGD:1549683 NCBI chr 5:112,142,946...157,142,946 JBrowse link
Q Bss5 Bone structure and strength QTL 5 IDA 9.8 RGD PMID:16059631 RGD:1549683 NCBI chr 7:26,638,057...71,638,057 JBrowse link
Q Bss7 Bone structure and strength QTL 7 IDA 6.4 RGD PMID:16059631 RGD:1549683 NCBI chr15:82,194,914...108,192,169 JBrowse link
femur stiffness term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss110 Bone structure and strength QTL 1 IDA 8.4 RGD PMID:16059631 RGD:1549683 NCBI chr 5:112,142,946...157,142,946 JBrowse link
Q Bss38 Bone structure and strength QTL 38 IDA 1.0E-4 7.05 RGD PMID:18158281 RGD:2293455 NCBI chr 1:210,980,612...255,980,612 JBrowse link
femur total energy absorbed before break term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd37 Bone mineral density QTL 37 IDA 1.0E-4 6.6 update to femoral neck term RGD PMID:18282130 RGD:2293456
Q Bmd39 Bone mineral density QTL 39 IDA update to femoral neck term RGD PMID:18282130 RGD:2293456 NCBI chr 8:62,848,139...107,848,139 JBrowse link
Q Bss108 Bone structure and strength QTL 108 IDA 5.3 RGD PMID:16059631 RGD:1549683 NCBI chr 2:214,404,877...251,712,708 JBrowse link
Q Bss109 Bone structure and strength QTL 109 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:112,142,946...157,142,946 JBrowse link
Q Bss114 Bone structure and strength QTL 114 IDA 2.87E-7 6.54 RGD PMID:26297441 RGD:11528619 NCBI chr 5:129,627,938...131,996,704 JBrowse link
Q Bss39 Bone structure and strength QTL 39 IDA 1.0E-4 7.1 RGD PMID:18158281 RGD:2293455 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Q Bss40 Bone structure and strength QTL 40 IDA 1.0E-4 5.66 RGD PMID:18158281 RGD:2293455 NCBI chr10:1...35,730,538 JBrowse link
femur ultimate displacement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss118 Bone structure and strength QTL 118 IDA 2.2E-7 6.658 RGD PMID:26297441 RGD:11528619 NCBI chr11:54,107,987...56,845,449 JBrowse link
femur ultimate force term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss1 Bone structure and strength QTL 1 IDA 4.8 RGD PMID:16059631 RGD:1549683 NCBI chr 1:182,039,247...227,039,247 JBrowse link
Q Bss106 Bone structure and strength QTL 106 IDA 7.9 RGD PMID:16059631 RGD:1549683 NCBI chr 5:112,142,946...157,142,946 JBrowse link
Q Bss107 Bone structure and strength QTL 107 IDA 7.0 RGD PMID:16059631 RGD:1549683 NCBI chr 2:214,404,877...251,712,708 JBrowse link
Q Bss36 Bone structure and strength QTL 36 IDA 1.0E-4 10.66 RGD PMID:18158281 RGD:2293455 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Q Bss37 Bone structure and strength QTL 37 IDA 1.0E-4 4.64 RGD PMID:18158281 RGD:2293455 NCBI chr 5:125,969,677...156,302,135 JBrowse link
lumbar vertebra area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss119 Bone structure and strength QTL 119 IDA 4.0E-17 16.39 RGD PMID:26297441 RGD:11528619 NCBI chr12:26,510,038...26,983,303 JBrowse link
lumbar vertebra cortical cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss44 Bone structure and strength QTL 44 IDA 1.0E-4 10.97 RGD PMID:18158281 RGD:2293455 NCBI chr 2:105,628,029...150,628,029 JBrowse link
Q Bss45 Bone structure and strength QTL 45 IDA 1.0E-4 5.13 RGD PMID:18158281 RGD:2293455 NCBI chr16:44,455,123...89,455,123 JBrowse link
Q Bss46 Bone structure and strength QTL 46 IDA 1.0E-4 8.8 RGD PMID:18158281 RGD:2293455 NCBI chr18:12,066,482...57,066,482 JBrowse link
lumbar vertebra cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd2 Bone mineral density QTL 2 IDA 1.0E-4 13.4 L5 lumbar vertebra total cross-sectional area RGD PMID:16180139 RGD:1553896 NCBI chr 2:122,597,372...215,234,002 JBrowse link
Q Bss41 Bone structure and strength QTL 41 IDA 1.0E-4 9.38 RGD PMID:18158281 RGD:2293455 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bss42 Bone structure and strength QTL 42 IDA 1.0E-4 7.25 RGD PMID:18158281 RGD:2293455
Q Bss43 Bone structure and strength QTL 43 IDA 1.0E-4 5.33 RGD PMID:18158281 RGD:2293455
lumbar vertebra trabecular cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss47 Bone structure and strength QTL 47 IDA 1.0E-4 7.25 RGD PMID:18158281 RGD:2293455 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bss48 Bone structure and strength QTL 48 IDA 1.0E-4 16.05 RGD PMID:18158281 RGD:2293455
Q Bss49 Bone structure and strength QTL 49 IDA 1.0E-4 5.61 RGD PMID:18158281 RGD:2293455 NCBI chr12:16,135,029...52,308,831 JBrowse link
Q Bss50 Bone structure and strength QTL 50 IDA 3.0E-4 4.64 RGD PMID:18158281 RGD:2293455 NCBI chr18:1...34,566,578 JBrowse link
tibia area measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss100 Bone structure and strength QTL 100 IDA 4.7 RGD PMID:21818327 RGD:5684953 NCBI chr 8:58,991,697...91,341,052 JBrowse link
Q Bss104 Bone structure and strength QTL 104 IDA 3.9 RGD PMID:21818327 RGD:5684953
Q Bss99 Bone structure and strength QTL 99 IDA 3.1 RGD PMID:21818327 RGD:5684953 NCBI chr 6:53,684,921...98,684,921 JBrowse link
tibia cortical bone volume term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss89 Bone structure and strength QTL 89 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 8:58,991,697...91,341,052 JBrowse link
Q Bss96 Bone structure and strength QTL 96 IDA 4.9 RGD PMID:20699128 RGD:4889918 NCBI chr 4:57,613,242...102,613,242 JBrowse link
tibia cortical bone volume to tibia total bone volume ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss93 Bone structure and strength QTL 93 IDA 4.4 RGD PMID:20699128 RGD:4889918 NCBI chr17:27,233,445...65,155,015 JBrowse link
tibia length term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss51 Bone structure and strength QTL 51 IDA 1.0E-4 3.8 RGD PMID:19113924 RGD:2312767 NCBI chr 1:5,293,229...34,184,556 JBrowse link
Q Bss53 Bone structure and strength QTL 53 IDA 1.0E-4 4.3 RGD PMID:19113924 RGD:2312767
Q Bss60 Bone structure and strength QTL 60 IDA 1.0E-4 4.1 RGD PMID:19113924 RGD:2312767 NCBI chr 8:58,991,697...91,341,052 JBrowse link
Q Bss66 Bone structure and strength QTL 66 IDA 1.0E-4 3.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Lmblg1 Limb length QTL 1 IDA 6.4 RGD PMID:15452030 RGD:1302893 NCBI chr 1:160,573,753...210,707,719 JBrowse link
Q Lmblg2 Limb length QTL 2 IDA 6.0 RGD PMID:15452030 RGD:1302893
Q Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 IDA 3.0E-4 RGD PMID:8997636 RGD:632346 NCBI chr 7:1...34,650,782 JBrowse link
tibia midshaft cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss54 Bone structure and strength QTL 54 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767
Q Bss55 Bone structure and strength QTL 55 IDA 1.0E-4 3.2 RGD PMID:19113924 RGD:2312767
Q Bss61 Bone structure and strength QTL 61 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bss62 Bone structure and strength QTL 62 IDA 1.0E-4 1.5 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bss72 Bone structure and strength QTL 72 IDA 1.0E-4 2.6 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bss73 Bone structure and strength QTL 73 IDA 1.5 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bss76 Bone structure and strength QTL 76 IDA 1.0E-4 3.0 RGD PMID:19113924 RGD:2312767 NCBI chr 8:39,106,258...91,341,052 JBrowse link
Q Bss79 Bone structure and strength QTL 79 IDA 1.0E-4 1.8 RGD PMID:19113924 RGD:2312767 NCBI chr10:62,556,066...107,556,066 JBrowse link
Q Bss82 Bone structure and strength QTL 82 IDA 1.0E-4 3.0 RGD PMID:19113924 RGD:2312767 NCBI chr14:38,023,710...83,023,710 JBrowse link
tibia midshaft endosteal cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss56 Bone structure and strength QTL 56 IDA 1.0E-4 2.4 RGD PMID:19113924 RGD:2312767
Q Bss77 Bone structure and strength QTL 77 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr 8:39,106,258...91,341,052 JBrowse link
Q Bss80 Bone structure and strength QTL 80 IDA 1.0E-4 2.0 RGD PMID:19113924 RGD:2312767 NCBI chr10:62,556,066...107,556,066 JBrowse link
Q Bss83 Bone structure and strength QTL 83 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr14:38,023,710...83,023,710 JBrowse link
tibia midshaft total cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss59 Bone structure and strength QTL 59 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr 5:8,627,230...53,627,230 JBrowse link
Q Bss65 Bone structure and strength QTL 65 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr15:67,399,137...108,192,169 JBrowse link
Q Bss71 Bone structure and strength QTL 71 IDA 1.0E-4 2.6 RGD PMID:19113924 RGD:2312767
Q Bss85 Bone structure and strength QTL 85 IDA 1.0E-4 0.8 RGD PMID:19113924 RGD:2312767 NCBI chr18:15,226,101...42,690,662 JBrowse link
Q Bss86 Bone structure and strength QTL 86 IDA 4.1 RGD PMID:20699128 RGD:4889918 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bss91 Bone structure and strength QTL 91 IDA 4.0 RGD PMID:20699128 RGD:4889918 NCBI chr10:83,061,236...92,869,129 JBrowse link
tibia stiffness term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss102 Bone structure and strength QTL 102 IDA 7.2E-7 5.5 RGD PMID:21818327 RGD:5684953 NCBI chr 1:6,909,353...51,909,353 JBrowse link
tibia total bone volume term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss88 Bone structure and strength QTL 88 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 6:53,684,921...98,684,921 JBrowse link
Q Bss97 Bone structure and strength QTL 97 IDA 5.6 RGD PMID:20699128 RGD:4889918 NCBI chr 4:57,613,242...102,613,242 JBrowse link
tibia total energy absorbed before break term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss103 Bone structure and strength QTL 103 IDA 2.8 RGD PMID:21818327 RGD:5684953 NCBI chr15:16,911,521...32,439,851 JBrowse link
Q Bss58 Bone structure and strength QTL 58 IDA 1.0E-4 3.7 RGD PMID:19113924 RGD:2312767
Q Bss64 Bone structure and strength QTL 64 IDA 1.0E-4 1.3 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,893,811...50,893,811 JBrowse link
Q Bss67 Bone structure and strength QTL 67 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bss68 Bone structure and strength QTL 68 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bss70 Bone structure and strength QTL 70 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bss74 Bone structure and strength QTL 74 IDA 1.0E-4 2.0 RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bss78 Bone structure and strength QTL 78 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767 NCBI chr 8:39,106,258...91,341,052 JBrowse link
Q Bss84 Bone structure and strength QTL 84 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr14:38,023,710...83,023,710 JBrowse link
tibia ultimate force term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss101 Bone structure and strength QTL 101 IDA 3.6 RGD PMID:21818327 RGD:5684953 NCBI chr 1:6,909,353...51,909,353 JBrowse link
Q Bss98 Bone structure and strength QTL 98 IDA 0.0026 3.9 RGD PMID:21818327 RGD:5684953 NCBI chr15:1...39,411,584 JBrowse link
tibia-fibula cortical bone endosteal cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss87 Bone structure and strength QTL 87 IDA 6.7 RGD PMID:20699128 RGD:4889918 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bss90 Bone structure and strength QTL 90 IDA 4.1 RGD PMID:20699128 RGD:4889918 NCBI chr 9:54,506,504...99,506,504 JBrowse link
Q Bss94 Bone structure and strength QTL 94 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 1:51,909,206...91,302,615 JBrowse link
tibia-fibula cortical bone total cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss92 Bone structure and strength QTL 92 IDA 3.9 RGD PMID:20699128 RGD:4889918 NCBI chr14:86,271,332...100,078,267 JBrowse link
tibia-fibula cross-sectional area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss95 Bone structure and strength QTL 95 IDA 4.4 RGD PMID:20699128 RGD:4889918 NCBI chr 3:37,796,919...82,796,919 JBrowse link
total volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd11 Bone mineral density QTL 11 IDA 11.0 RGD PMID:16461031 RGD:1578307 NCBI chr 4:92,406,430...137,406,430 JBrowse link
Q Bmd14 Bone mineral density QTL 14 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 6:33,328,841...78,328,841 JBrowse link
Q Bmd17 Bone mineral density QTL 17 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr15:25,285,835...104,695,021 JBrowse link
Q Bmd19 Bone mineral density QTL 19 IDA 1.0E-4 10.7 RGD PMID:18282130 RGD:2293456
Q Bmd20 Bone mineral density QTL 20 IDA 2.0E-4 4.3 RGD PMID:18282130 RGD:2293456 NCBI chr 6:1...25,740,059 JBrowse link
Q Bmd21 Bone mineral density QTL 21 IDA 3.0E-4 4.2 RGD PMID:18282130 RGD:2293456
Q Bmd22 Bone mineral density QTL 22 IDA 1.0E-4 4.9 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd23 Bone mineral density QTL 23 IDA 1.0E-4 7.3 RGD PMID:18282130 RGD:2293456
Q Bmd26 Bone mineral density QTL 26 IDA 2.0E-4 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr12:1...38,635,130 JBrowse link
Q Bmd30 Bone mineral density QTL 30 IDA 1.0E-4 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd6 Bone mineral density QTL 6 IDA 12.2 femoral neck total volumetric bone mineral density RGD PMID:16461031 RGD:1578307
Q Bmd72 Bone mineral density QTL 72 IDA 1.0E-4 2.5 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 1:46,302,615...91,302,615 JBrowse link
Q Bmd74 Bone mineral density QTL 74 IDA 1.0E-4 4.0 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 1:91,302,413...136,302,413 JBrowse link
Q Bmd75 Bone mineral density QTL 75 IDA 1.0E-4 4.1 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 2:218,051,934...251,712,708 JBrowse link
Q Bmd76 Bone mineral density QTL 76 IDA 1.0E-4 3.6 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 3:47,904,172...70,710,963 JBrowse link
Q Bmd78 Bone mineral density QTL 78 IDA 1.0E-4 3.1 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 5:149,661,912...166,600,247 JBrowse link
Q Bmd79 Bone mineral density QTL 79 IDA 1.0E-4 2.3 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr 7:96,700,404...118,618,702 JBrowse link
Q Bmd80 Bone mineral density QTL 80 IDA 1.0E-4 3.2 update to tibia metaphysis total BMD RGD PMID:19113924 RGD:2312767 NCBI chr10:20,110,614...65,110,614 JBrowse link
Q Bmd81 Bone mineral density QTL 81 IDA 4.3 RGD PMID:20699128 RGD:4889918 NCBI chr 3:59,119,402...70,710,963 JBrowse link
Q Bmd88 Bone mineral density QTL 88 IDA 4.0 update to femur specific term RGD PMID:18282130 RGD:2293456 NCBI chr 9:31,250,432...65,651,574 JBrowse link
Q Bmd9 Bone mineral QTL density 9 IDA 5.0 RGD PMID:16461031 RGD:1578307 NCBI chr 2:5,736,325...50,736,325 JBrowse link
trabecular volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd13 Bone mineral density QTL 13 IDA 4.9 RGD PMID:16461031 RGD:1578307 NCBI chr 5:69,474,415...114,474,415 JBrowse link
Q Bmd15 Bone mineral density QTL 15 IDA 5.2 femoral neck trabecular volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 7:10,517,086...62,346,019 JBrowse link
Q Bmd18 Bone mineral density QTL 18 IDA 5.2 RGD PMID:16461031 RGD:1578307 NCBI chr15:25,285,835...104,695,021 JBrowse link
Q Bmd27 Bone mineral density QTL 27 IDA 1.0E-4 6.6 RGD PMID:18282130 RGD:2293456 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Q Bmd28 Bone mineral density QTL 28 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,360,057...27,233,623 JBrowse link
Q Bmd8 Bone mineral density QTL 8 IDA 4.9 femoral neck trabecular volumetric bone mineral density RGD PMID:16461031 RGD:1578307 NCBI chr 1:51,940,904...101,229,020 JBrowse link
vertebra ultimate force term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss6 Bone structure and strength QTL 6 IDA 4.0 RGD PMID:16059631 RGD:1549683 NCBI chr10:58,073,360...103,073,360 JBrowse link
Q Bss8 Bone structure and strength QTL 8 IDA 4.0 RGD PMID:16059631 RGD:1549683 NCBI chr19:1...31,969,901 JBrowse link
volumetric bone mineral density term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd1 Bone mineral density QTL 1 IDA 1.0E-4 12.2 femoral midshaft volumetric bone mineral density RGD PMID:16180139 RGD:1553896 NCBI chr 1:101,228,864...146,228,864 JBrowse link
Q Bmd3 Bone mineral density QTL 3 IDA 1.0E-4 7.9 distal femur total volumetric bone mineral density RGD PMID:16180139 RGD:1553896 NCBI chr 8:49,849,908...118,871,671 JBrowse link
Q Bmd4 Bone mineral density QTL 4 IDA 1.0E-4 9.4 femoral midshaft total volumetric bone mineral density RGD PMID:16180139 RGD:1553896
Q Bmd41 Bone mineral density QTL 41 IDA 1.0E-4 8.9 RGD PMID:18707222 RGD:2300109 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bmd43 Bone mineral density QTL 43 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:181,059,071...226,059,071 JBrowse link
Q Bmd44 Bone mineral density QTL 44 IDA 1.0E-4 5.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:66,077,886...111,077,886 JBrowse link
Q Bmd45 Bone mineral density QTL 45 IDA 1.0E-4 12.1 RGD PMID:18707222 RGD:2300109
Q Bmd46 Bone mineral density QTL 46 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109
Q Bmd48 Bone mineral density QTL 48 IDA 1.0E-4 5.8 RGD PMID:18707222 RGD:2300109 NCBI chr 2:182,024,327...227,024,327 JBrowse link
Q Bmd5 Bone mineral density QTL 5 IDA 1.0E-4 12.1 lumbar vertebra 5 cortical volumetric bone mineral density RGD PMID:16180139 RGD:1553896 NCBI chr19:23,188,586...68,188,586 JBrowse link
Q Bmd50 Bone mineral density QTL 50 IDA 1.0E-4 5.9 RGD PMID:18707222 RGD:2300109
Q Bmd52 Bone mineral density QTL 52 IDA 1.0E-4 11.2 RGD PMID:18707222 RGD:2300109
Q Bmd53 Bone mineral density QTL 53 IDA 1.0E-4 5.4 RGD PMID:18707222 RGD:2300109
Q Bmd54 Bone mineral density QTL 54 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109
Q Bmd55 Bone mineral density QTL 55 IDA 1.0E-4 5.7 RGD PMID:18707222 RGD:2300109 NCBI chr 8:85,348,065...130,348,065 JBrowse link
Q Bmd56 Bone mineral density QTL 56 IDA 5.4 RGD PMID:18707222 RGD:2300109
Q Bmd57 Bone mineral density QTL 57 IDA 1.0E-4 9.8 RGD PMID:18707222 RGD:2300109
Q Bmd58 Bone mineral density QTL 58 IDA 1.0E-4 4.9 RGD PMID:18707222 RGD:2300109 NCBI chr10:27,443,787...72,443,787 JBrowse link
Q Bmd59 Bone mineral density QTL 59 IDA 1.0E-4 7.1 RGD PMID:18707222 RGD:2300109 NCBI chr12:16,135,029...52,308,831 JBrowse link
Q Bmd60 Bone mineral density QTL 60 IDA 1.0E-4 5.7 RGD PMID:18707222 RGD:2300109
Q Bmd61 Bone mineral density QTL 61 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109
Q Bmd62 Bone mineral density QTL 62 IDA 1.0E-4 12.8 RGD PMID:18707222 RGD:2300109
Q Bmd63 Bone mineral density QTL 63 IDA 1.0E-4 5.9 RGD PMID:18707222 RGD:2300109
Q Bmd64 Bone mineral density QTL 64 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr16:44,455,123...89,455,123 JBrowse link
Q Bmd65 Bone mineral density QTL 65 IDA 1.0E-4 19.7 RGD PMID:18707222 RGD:2300109
Q Bmd66 Bone mineral density QTL 66 IDA 1.0E-4 13.1 RGD PMID:18707222 RGD:2300109
Q Bmd68 Bone mineral density QTL 68 IDA 1.0E-4 6.4 RGD PMID:18707222 RGD:2300109 NCBI chr20:26,689,362...56,021,148 JBrowse link
Q Bmd92 Bone mineral density QTL 92 IDA 0.01 RGD PMID:27113531 RGD:11353859
Term paths to the root
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  clinical measurement 2369
    musculoskeletal system measurement 297
      skeletal system measurement 235
        bone measurement 213
          bone marrow measurement + 0
          bone morphological measurement + 179
          bone physiological measurement + 34
paths to the root