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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:serum antibody level
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Accession:CMO:0001277 term browser browse the term
Definition:A measurement of the amount of an immunoglobulin molecule possessing a specific amino acid sequence that binds to a specific antigen, a substance introduced into an organism which initiates an immune response including the production of the very antibodies which bind to it in an effort to destroy it, in a specified sample of serum, the clear liquid that separates from blood after it has clotted completely, i.e. blood plasma from which fibrinogen has been removed.


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calculated serum anti-rat type 2 collagen autoantibody titer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ciaa1 CIA Autoantibody QTL 1 IDA RGD PMID:11001927 RGD:61067 NCBI chr20:2,646,395...4,597,031 JBrowse link
Q Ciaa4 CIA Autoantibody QTL 4 IDA RGD PMID:11001927 RGD:61067 NCBI chr 4:126,395,976...167,139,601 JBrowse link
Q Ciaa5 CIA Autoantibody QTL 5 IDA RGD PMID:11001927 RGD:61067 NCBI chr 5:94,858,972...143,070,159 JBrowse link
calculated serum anti-type 2 collagen antibody titer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ciaa2 CIA Autoantibody QTL 2 IDA RGD PMID:10857786 RGD:61066 NCBI chr10:63,221,094...107,211,142 JBrowse link
Q Ciaa3 CIA Autoantibody QTL 3 IDA RGD PMID:10857786 RGD:61066 NCBI chr 9:7,954,720...22,071,169 JBrowse link
serum anti-DNA antibody level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iresp1 Immunoglobin response QTL1 IDA RGD PMID:10898507 RGD:619646 NCBI chr20:9,039,719...13,461,775 JBrowse link
serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pia28 Pristane induced arthritis QTL 28 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 4:73,630,210...118,630,210 JBrowse link
Q Pia32 Pristane induced arthritis QTL 32 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 4:105,789,505...150,789,505 JBrowse link
serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pia27 Pristane induced arthritis QTL 27 IDA RGD PMID:14674011 RGD:2302026 NCBI chr11:82,566,545...83,440,803 JBrowse link
Q Pia29 Pristane induced arthritis QTL 29 IDA RGD PMID:14674011 RGD:2302026 NCBI chr16:21,735,975...66,735,975 JBrowse link
Q Pia30 Pristane induced arthritis QTL 30 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 3:27,936,919...72,936,919 JBrowse link
Q Pia31 Pristane induced arthritis QTL 31 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 1:10,992,065...55,992,065 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    immune system measurement 49
      immunoglobulin measurement 21
        blood immunoglobulin measurement 21
          serum immunoglobulin measurement 21
            serum antibody level 12
              serum anti-DNA antibody level + 1
              serum anti-Epstein-Barr virus (EBV) antibody level 0
              serum anti-collagen antibody level + 5
              serum anti-coronavirus antibody level + 0
              serum anti-cytomegalovirus (CMV) antibody level 0
              serum anti-laminin antibody level + 0
              serum anti-toxoplasma antibody level + 0
              serum antibody titer + 5
              serum autoantibody level + 9
Path 2
Term Annotations click to browse term
  clinical measurement 2369
    blood measurement 443
      blood chemistry measurement 426
        blood protein measurement 188
          blood globulin measurement 21
            blood immunoglobulin measurement 21
              blood antibody level 12
                serum antibody level 12
                  serum anti-DNA antibody level + 1
                  serum anti-Epstein-Barr virus (EBV) antibody level 0
                  serum anti-collagen antibody level + 5
                  serum anti-coronavirus antibody level + 0
                  serum anti-cytomegalovirus (CMV) antibody level 0
                  serum anti-laminin antibody level + 0
                  serum anti-toxoplasma antibody level + 0
                  serum antibody titer + 5
                  serum autoantibody level + 9
paths to the root