Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:tumor measurement
go back to main search page
Accession:CMO:0000341 term browser browse the term
Definition:Measurement of an abnormal growth of tissue resulting from uncontrolled, progressive multiplication of cells and serving no physiological function.


show annotations for term's descendants           Sort by:
benign colorectal tumor number term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr5 Colorectal carcinoma resistance QTL 5 IDA 9.0E-4 3.18 RGD PMID:17510081 RGD:1625309 NCBI chr 6:98,944,780...143,944,780 JBrowse link
Q Colcr9 Colorectal carcinoma resistance QTL 9 IDA 0.0024 2.97 RGD PMID:17510081 RGD:1625309 NCBI chr20:1...33,724,594 JBrowse link
benign colorectal tumor surface area measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr1 Colorectal carcinoma resistance QTL 1 IDA 3.0E-4 4.3 RGD PMID:17510081 RGD:1625309 NCBI chr 4:8,428,551...30,449,094 JBrowse link
Q Colcr6 Colorectal carcinoma resistance QTL 6 IDA 0.0126 2.9 RGD PMID:17510081 RGD:1625309 NCBI chr15:83,700,787...108,192,169 JBrowse link
Q Colcr7 Colorectal carcinoma resistance QTL 7 IDA 0.0044 3.35 RGD PMID:17510081 RGD:1625309 NCBI chr17:2,120,843...22,087,569 JBrowse link
Q Colcs1 Colorectal carcinoma susceptibility QTL 1 IDA 0.0055 2.99 RGD PMID:17510081 RGD:1625309 NCBI chr 5:160,071,170...172,129,029 JBrowse link
colorectal tumor number term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr2 Colorectal carcinoma resistance QTL 2 IDA 0.0197 6.57 RGD PMID:17510081 RGD:1625309 NCBI chr15:2,315,759...47,315,759 JBrowse link
mammary tumor growth rate term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mamtr7 Mammary tumor resistance QTL 7 IDA 0.003 RGD PMID:19052818 RGD:2302423
Q Mamtr8 Mammary tumor resistance QTL 8 IDA 0.001 RGD PMID:19052818 RGD:2302423 NCBI chr18:31,610,505...85,493,247 JBrowse link
Q Mcs20 Mammary carcinoma susceptibility QTL 20 IDA 3.0 RGD PMID:16596452 RGD:1599317 NCBI chr 9:21,031,430...49,025,574 JBrowse link
Q Mcs21 Mammary carcinoma susceptibility QTL 21 IDA 3.0 RGD PMID:16596452 RGD:1599317 NCBI chr10:29,377,046...52,699,134 JBrowse link
Q Mcs22 Mammary carcinoma susceptibility QTL 22 IDA 3.3 RGD PMID:16596452 RGD:1599317
mammary tumor incidence/prevalence measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs31 Mammary carcinoma susceptibility QTL 31 IDA 2.98 RGD PMID:23967281 RGD:7794780 NCBI chr 9:85,262,459...118,999,486 JBrowse link
Q Mcs32 Mammary carcinoma susceptibility QTL 32 IDA 2.61 RGD PMID:23967281 RGD:7794780
Q Mcs33 Mammary carcinoma susceptibility QTL 33 IDA 1.93 RGD PMID:23967281 RGD:7794780 NCBI chr 5:136,631,198...172,190,305 JBrowse link
Q Mcs34 Mammary carcinoma susceptibility QTL 34 IDA 1.54 RGD PMID:23967281 RGD:7794780 NCBI chr18:65,635,567...85,897,775 JBrowse link
mammary tumor number term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca11 Estrogen-induced mammary cancer QTL 11 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:73,176,602...118,176,602 JBrowse link
Q Emca12 Estrogen-induced mammary cancer QTL 12 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:94,034,903...139,034,903 JBrowse link
Q Emca13 Estrogen-induced mammary cancer QTL 13 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:14,606,078...59,606,078 JBrowse link
Q Emca6 Estrogen-induced mammary cancer QTL 6 IDA 5.8 RGD PMID:16885383 RGD:1642522 NCBI chr 4:45,429,709...157,555,683 JBrowse link
Q Emca7 Estrogen-induced mammary cancer QTL 7 IDA 4.0 RGD PMID:16885383 RGD:1642522 NCBI chr 6:20,859,430...113,082,285 JBrowse link
Q Emca8 Estrogen-induced mammary cancer QTL 8 IDA 4.1 RGD PMID:16885383 RGD:1642522 NCBI chr 5:55,124,766...172,190,305 JBrowse link
Q Mamtr1 Mammary tumor resistance QTL 1 IDA 1.0E-4 RGD PMID:12844486 RGD:631852 NCBI chr 5:17,576,633...62,576,633 JBrowse link
Q Mamtr2 Mammary tumor resistance QTL 2 IDA 1.0E-4 RGD PMID:14522903 RGD:724790 NCBI chr 2:9,623,581...54,623,581 JBrowse link
Q Mamtr3 Mammary tumor resistance QTL 3 IDA 1.0E-4 RGD PMID:14522903 RGD:724790
Q Mamtr4 Mammary tumor resistance QTL 4 IDA 3.0E-4 RGD PMID:14522903 RGD:724790 NCBI chr 2:18,227,137...63,227,137 JBrowse link
Q Mamtr5 Mammary tumor resistance QTL 5 IDA RGD PMID:17230524 RGD:1599390 NCBI chr 5:23,671,493...68,671,493 JBrowse link
Q Mamtr6 Mammary tumor resistance QTL 6 IDA RGD PMID:17230524 RGD:1599390 NCBI chr18:19,553,532...85,493,247 JBrowse link
Q Mcs1 Mammary carcinoma susceptibility QTL 1 IDA 4.4 RGD PMID:8168109 RGD:61080 NCBI chr 2:9,623,581...25,054,526 JBrowse link
Q Mcs12 Mammary carcinoma susceptibility QTL 12 IDA 1.0E-4 RGD PMID:16266982 RGD:1559294
Q Mcs13 Mammary carcinoma susceptibility QTL 13 IDA 1.0E-4 RGD PMID:16266982 RGD:1559294
Q Mcs14 Mammary carcinoma susceptibility QTL 14 IDA 1.0E-4 RGD PMID:16266982 RGD:1559294
Q Mcs15 Mammary carcinoma susceptibility QTL 15 IDA 4.5 RGD PMID:16568087 RGD:1581951 NCBI chr10:72,724,423...107,713,808 JBrowse link
Q Mcs16 Mammary carcinoma susceptibility QTL 16 IDA 2.4 RGD PMID:16596452 RGD:1599317 NCBI chr 1:1...26,564,886 JBrowse link
Q Mcs17 Mammary carcinoma susceptibility QTL 17 IDA 3.0 RGD PMID:16596452 RGD:1599317 NCBI chr 1:207,099,883...252,099,883 JBrowse link
Q Mcs18 Mammary carcinoma susceptibility QTL 18 IDA 2.6 RGD PMID:16596452 RGD:1599317 NCBI chr 2:9,623,581...44,538,110 JBrowse link
Q Mcs19 Mammary carcinoma susceptibility QTL 19 IDA 2.5 RGD PMID:16596452 RGD:1599317 NCBI chr 5:82,032,155...127,032,155 JBrowse link
Q Mcs2 Mammary carcinoma susceptibility QTL 2 IDA 3.38 RGD PMID:9584103 RGD:61081 NCBI chr 7:20,920,494...37,412,865 JBrowse link
Q Mcs23 Mammary carcinoma susceptibility QTL 23 IDA RGD PMID:17404222 RGD:1601189
Q Mcs24 Mammary carcinoma susceptibility QTL 24 IDA RGD PMID:17404222 RGD:1601189 NCBI chr 5:69,835,120...114,835,120 JBrowse link
Q Mcs28 Mammary carcinoma susceptibility QTL 28 IDA RGD PMID:21205740 RGD:5684388
Q Mcs29 Mammary carcinoma susceptibility QTL 29 IDA RGD PMID:21205740 RGD:5684388 NCBI chr 5:38,004,331...83,004,331 JBrowse link
Q Mcs3 Mammary carcinoma susceptibility QTL 3 IDA 2.15 RGD PMID:9584103 RGD:61081 NCBI chr 1:111,404,407...142,582,336 JBrowse link
Q Mcs30 Mammary carcinoma susceptibility QTL 30 IDA 8.62 RGD PMID:24023717 RGD:7327193 NCBI chr12:5,633,306...50,633,306 JBrowse link
Q Mcs4 Mammary carcinoma susceptibility QTL 4 IDA 1.1 RGD PMID:9584103 RGD:61081 NCBI chr 8:44,475,043...89,475,043 JBrowse link
Q Mcs5 Mammary carcinoma susceptibility QTL 5 IDA 10.51 RGD PMID:11139513 RGD:62417 NCBI chr 5:60,601,597...137,492,949 JBrowse link
Q Mcs6 Mammary carcinoma susceptibility QTL 6 IDA 2.29 RGD PMID:11139513 RGD:62417 NCBI chr 7:28,624,575...65,788,017 JBrowse link
Q Mcs7 Mammary carcinoma susceptibility QTL 7 IDA 2.38 RGD PMID:11139513 RGD:62417 NCBI chr10:72,724,423...107,713,808 JBrowse link
Q Mcs8 Mammary carcinoma susceptibility QTL 8 IDA 4.28 RGD PMID:11139513 RGD:62417 NCBI chr14:3,957,878...24,886,169 JBrowse link
Q Mcsm1 Mammary carcinoma susceptibility modifier QTL 1 IDA RGD PMID:11139513 RGD:62417 NCBI chr 6:64,367,996...109,367,996 JBrowse link
number of squamous cell tumors of the tongue with diameter greater than 3 mm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcas10 Tongue tumor susceptibility QTL 10 IDA 3.12 RGD PMID:11429048 RGD:634723 NCBI chr10:31,796,281...76,796,281 JBrowse link
Q Tcas11 Tongue tumor susceptibility QTL 11 IDA 4.12 RGD PMID:16527513 RGD:1578522 NCBI chr 5:51,657,967...166,600,247 JBrowse link
Q Tcas2 Tongue tumor susceptibility QTL 2 IDA 4.93 RGD PMID:11429048 RGD:634723 NCBI chr 1:201,915,593...208,479,939 JBrowse link
Q Tcas3 Tongue tumor susceptibility QTL 3 IDA 6.88 RGD PMID:11429048 RGD:634723 NCBI chr 4:11,706,604...92,690,519 JBrowse link
Q Tcas4 Tongue tumor susceptibility QTL 4 IDA 7.29 RGD PMID:11429048 RGD:634723 NCBI chr14:17,906,726...54,251,504 JBrowse link
Q Tcas5 Tongue tumor susceptibility QTL 5 IDA 10.04 RGD PMID:11429048 RGD:634723
Q Tcas6 Tongue tumor susceptibility QTL 6 IDA 6.85 RGD PMID:11429048 RGD:634723 NCBI chr 1:102,359,314...153,680,016 JBrowse link
Q Tcas8 Tongue tumor susceptibility QTL 8 IDA 3.47 RGD PMID:11429048 RGD:634723 NCBI chr 5:15,707,451...60,707,451 JBrowse link
Q Tcas9 Tongue tumor susceptibility QTL 9 IDA 3.29 RGD PMID:11429048 RGD:634723
number of squamous cell tumors of the tongue with diameter greater than 5 mm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcat1 Tongue tumor resistance QTL 1 IDA 3.3 RGD PMID:9563479 RGD:61091 NCBI chr 1:108,680,016...153,680,016 JBrowse link
percentage of study population developing mammary tumors during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca4 Estrogen-induced mammary cancer QTL 4 IDA 3.7 RGD PMID:16885383 RGD:1642522 NCBI chr 7:63,889,858...108,889,858 JBrowse link
Q Emca5 Estrogen-induced mammary cancer QTL 5 IDA 3.9 RGD PMID:16885383 RGD:1642522 NCBI chr 3:145,335,553...189,428,310 JBrowse link
percentage of study population developing T-cell lymphomas during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tls2 T-lymphoma susceptibility QTL 2 IDA 0.001 0.0 RGD PMID:10360666 RGD:619600 NCBI chr 7:82,111,382...132,099,989 JBrowse link
Q Tls3 T-lymphoma susceptibility QTL 3 IDA 1.0E-4 0.0 RGD PMID:10360666 RGD:619600 NCBI chr10:27,587,226...96,099,902 JBrowse link
percentage of study population developing testis tumors during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tescar1 Testicular tumor resistance QTL 1 IDA 3.9 RGD PMID:15805257 RGD:1358944 NCBI chr11:34,618,760...79,618,760 JBrowse link
percentage of study population developing trigeminal nerve neurilemmomas during a period of time term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Schws1 Schwannoma susceptibility QTL 1 IDA 0.0041 RGD PMID:16003739 RGD:1559300 NCBI chr10:40,535,708...107,713,808 JBrowse link
Q Schws2 Schwannoma susceptibility QTL 2 IDA 0.029 RGD PMID:16003739 RGD:1559300 NCBI chr 1:153,788,989...198,788,989 JBrowse link
Q Schws3 Schwannoma susceptibility QTL 3 IDA 0.001 RGD PMID:16003739 RGD:1559300 NCBI chr 3:139,299,381...184,299,381 JBrowse link
Q Schws4 Schwannoma susceptibility QTL 4 IDA 0.0078 RGD PMID:16003739 RGD:1559300 NCBI chr 6:78,204,640...123,204,640 JBrowse link
Q Schws7 Schwannoma susceptibility QTL 7 IDA 0.0115 RGD PMID:16003739 RGD:1559300
Q Schws8 Schwannoma susceptibility QTL 8 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:100,704,576...101,593,851 JBrowse link
Q Schws9 Schwannoma susceptibility QTL 9 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:101,593,607...146,593,607 JBrowse link
poorly differentiated malignant colorectal tumor number term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr2 Colorectal carcinoma resistance QTL 2 IDA 0.0197 6.57 RGD PMID:17510081 RGD:1625309 NCBI chr15:2,315,759...47,315,759 JBrowse link
Q Colcr3 Colorectal carcinoma resistance QTL 3 IDA 7.0E-6 5.02 RGD PMID:17510081 RGD:1625309 NCBI chr18:1...25,022,372 JBrowse link
Q Colcr8 Colorectal carcinoma resistance QTL 8 IDA 0.0014 3.1 RGD PMID:17510081 RGD:1625309 NCBI chr18:31,990,891...76,990,891 JBrowse link
poorly differentiated malignant colorectal tumor surface area measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr3 Colorectal carcinoma resistance QTL 3 IDA 7.0E-6 5.02 RGD PMID:17510081 RGD:1625309 NCBI chr18:1...25,022,372 JBrowse link
post-insult time to mammary tumor formation term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca1 Estrogen-induced mammary cancer QTL 1 IDA 4.4 RGD PMID:15611180 RGD:1358124 NCBI chr 5:104,262,817...153,890,625 JBrowse link
Q Emca10 Estrogen-induced mammary cancer QTL 10 IDA 0.048 RGD PMID:18420736 RGD:2292503 NCBI chr 6:22,288,257...27,729,050 JBrowse link
Q Emca2 Estrogen-induced mammary cancer QTL 2 IDA 1.6 RGD PMID:15611180 RGD:1358124 NCBI chr18:65,846,447...86,134,022 JBrowse link
Q Mcs26 Mammary carcinoma susceptibility QTL 26 IDA 1.0E-4 RGD PMID:20737482 RGD:4143380 NCBI chr 6:112,483,610...147,156,653 JBrowse link
Q Mcs27 Mammary carcinoma susceptibility QTL 27 IDA 1.0E-4 RGD PMID:20737482 RGD:4143380 NCBI chr13:45,990,077...50,392,939 JBrowse link
post-insult time to onset of T-cell lymphoma term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tls1 T-lymphoma susceptibility QTL 1 IDA 0.001 0.0 RGD PMID:10360666 RGD:619600
post-insult time to trigeminal nerve neurilemmoma formation term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Schws5 Schwannoma susceptibility QTL 5 IDA 0.0351 RGD PMID:16003739 RGD:1559300 NCBI chr13:64,497,900...109,350,286 JBrowse link
squamous cell carcinoma of the head and neck tumor number term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcas7 Tongue tumor susceptibility QTL 7 IDA 0.001 RGD PMID:15876484 RGD:1358147 NCBI chr19:41,722,546...74,246,245 JBrowse link
squamous cell carcinoma of the tongue maximum tumor diameter term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tcas1 Tongue tumor susceptibility QTL 1 IDA 6.08 RGD PMID:9563479 RGD:61091 NCBI chr19:19,220,689...64,220,689 JBrowse link
stomach tumor depth of invasion term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr3 Gastric cancer resistance QTL 3 IDA 2.3 RGD PMID:10706129 RGD:69698 NCBI chr16:17,730,818...72,536,785 JBrowse link
stomach tumor diameter term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr3 Gastric cancer resistance QTL 3 IDA 2.3 RGD PMID:10706129 RGD:69698 NCBI chr16:17,730,818...72,536,785 JBrowse link
stomach tumor susceptibility score term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr1 Gastric cancer resistance QTL 1 IDA 2.7 RGD PMID:10706129 RGD:69698 NCBI chr 4:103,834,277...148,834,277 JBrowse link
Q Gcr2 Gastric cancer resistance QTL 2 IDA 2.6 RGD PMID:10706129 RGD:69698 NCBI chr 3:29,056,275...47,904,329 JBrowse link
Q Gcs1 Gastric cancer susceptibility QTL1 IDA 3.8 RGD PMID:10706129 RGD:69698 NCBI chr15:82,714,037...106,778,197 JBrowse link
well differentiated malignant colorectal tumor surface area measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr4 Colorectal carcinoma resistance QTL4 IDA 7.0E-4 3.71 RGD PMID:17510081 RGD:1625309 NCBI chr 6:30,937,632...75,937,632 JBrowse link
Term paths to the root