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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:urine measurement
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Accession:CMO:0000256 term browser browse the term
Definition:Any measurement of urine, the fluid waste product excreted by the kidneys, or its components.


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absolute change in urine norepinephrine level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cstrr2 Cold stress response QTL 2 IDA RGD PMID:21063213 RGD:4889147 NCBI chr 1:155,866,514...158,592,016 JBrowse link
creatinine clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf19 Renal function QTL 19 IEP RGD PMID:14532335 RGD:727992 NCBI chr11:54,415,391...96,071,021 JBrowse link
Q Rf24 Renal function QTL 24 IDA RGD PMID:14532335 RGD:727992 NCBI chr16:3,386,790...26,128,267 JBrowse link
Q Rf25 Renal function QTL 25 IDA RGD PMID:14532335 RGD:727992 NCBI chr17:41,062,352...86,062,352 JBrowse link
Q Rf60 Renal function QTL 60 IDA RGD PMID:24192394 RGD:8552897 NCBI chr 4:30,448,961...82,336,920 JBrowse link
Q Rf61 Renal function QTL 61 IDA RGD PMID:24192394 RGD:8552897 NCBI chr13:71,610,804...89,333,251 JBrowse link
timed urine volume term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf18 Renal function QTL 18 IDA RGD PMID:14532335 RGD:727992 NCBI chr10:79,272,424...102,982,300 JBrowse link
Q Rf39 Renal function QTL 39 IDA RGD PMID:11721057 RGD:70849 NCBI chr 8:50,763,951...107,970,527 JBrowse link
Q Rf50 Renal function QTL 50 IDA RGD PMID:15452030 RGD:1302893
urine albumin excretion rate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur10 Proteinuria QTL 10 IDA RGD PMID:16534143 RGD:1578520 NCBI chr11:44,803,318...82,846,466 JBrowse link
Q Pur11 Proteinuria QTL 11 IDA RGD PMID:16534143 RGD:1578520 NCBI chr13:6,002,008...88,706,694 JBrowse link
Q Rf59 Renal function QTL 59 IDA RGD PMID:21127141 RGD:5684423 NCBI chr 3:140,069,424...146,976,080 JBrowse link
Q Uae1 Urinary albumin excretion QTL 1 IDA RGD PMID:12397040 RGD:634618 NCBI chr 1:99,645,382...182,701,046 JBrowse link
Q Uae13 Urinary albumin excretion QTL 13 IDA RGD PMID:12799471 RGD:634633 NCBI chr 2:145,306,936...212,705,578 JBrowse link
Q Uae14 Urinary albumin excretion QTL 14 IDA RGD PMID:12799471 RGD:634633 NCBI chr 6:46,047,353...91,047,353 JBrowse link
Q Uae15 Urinary albumin excretion QTL 15 IDA RGD PMID:12799471 RGD:634633 NCBI chr 8:37,760,859...61,459,705 JBrowse link
Q Uae16 Urinary albumin excretion QTL 16 IDA RGD PMID:12799471 RGD:634633 NCBI chr 9:65,657,365...108,376,720 JBrowse link
Q Uae17 Urinary albumin excretion QTL 17 IDA RGD PMID:12799471 RGD:634633 NCBI chr10:78,707,585...85,720,738 JBrowse link
Q Uae18 Urinary albumin excretion QTL 18 IDA RGD PMID:12799471 RGD:634633 NCBI chr11:29,958,996...57,754,989 JBrowse link
Q Uae19 Urinary albumin excretion QTL 19 IDA RGD PMID:12799471 RGD:634633 NCBI chr19:24,093,973...69,093,973 JBrowse link
Q Uae2 Urinary albumin excretion QTL 2 IDA RGD PMID:12397040 RGD:634618 NCBI chr 6:79,198,463...144,254,945 JBrowse link
Q Uae20 Urinary albumin excretion QTL 20 IDA RGD PMID:14638907 RGD:730279 NCBI chr 1:207,163,993...269,633,915 JBrowse link
Q Uae21 Urinary albumin excretion QTL 21 IDA RGD PMID:14638907 RGD:730279 NCBI chr 4:108,206,096...153,206,096 JBrowse link
Q Uae22 Urinary albumin excretion QTL 22 IDA RGD PMID:14638907 RGD:730279
Q Uae23 Urinary albumin excretion QTL 23 IDA RGD PMID:14638907 RGD:730279
Q Uae24 Urinary albumin excretion QTL 24 IDA RGD PMID:14638907 RGD:730279 NCBI chr 8:47,541,419...92,541,419 JBrowse link
Q Uae25 Urinary albumin excretion QTL 25 IDA RGD PMID:14638907 RGD:730279 NCBI chr 9:48,718,864...108,376,862 JBrowse link
Q Uae26 Urinary albumin excretion QTL 26 IDA RGD PMID:14638907 RGD:730279
Q Uae27 Urinary albumin excretion QTL 27 IDA RGD PMID:14638907 RGD:730279 NCBI chr  X:1,970,440...46,970,440 JBrowse link
Q Uae3 Urinary albumin excretion QTL 3 IDA RGD PMID:12397040 RGD:634618 NCBI chr12:1...15,486,827 JBrowse link
Q Uae30 Urinary albumin excretion QTL 30 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:160,111,531...262,090,437 JBrowse link
Q Uae31 Urinary albumin excretion QTL 31 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:39,106,363...103,375,781 JBrowse link
Q Uae32 Urinary albumin excretion QTL 32 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 2:78,665,619...219,826,953 JBrowse link
Q Uae33 Urinary albumin excretion QTL 33 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 6:72,227,641...130,729,205 JBrowse link
Q Uae34 Urinary albumin excretion QTL 34 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 9:62,072,275...96,470,995 JBrowse link
Q Uae35 Urinary albumin excretion QTL 35 IDA RGD PMID:16534143 RGD:1578520 NCBI chr11:44,803,318...82,846,466 JBrowse link
Q Uae36 Urinary albumin excretion QTL 36 IDA RGD PMID:16534143 RGD:1578520 NCBI chr13:6,002,008...88,706,694 JBrowse link
Q Uae37 Urinary albumin excretion QTL 37 IDA RGD PMID:17953514 RGD:1642911 NCBI chr 6:65,531,555...140,994,061 JBrowse link
Q Uae39 Urinary albumin excretion QTL 39 IDA RGD PMID:16534143 RGD:1578520 NCBI chr19:2,194,317...74,246,245 JBrowse link
Q Uae4 Urinary albumin excretion QTL 4 IDA RGD PMID:12397040 RGD:634618 NCBI chr17:36,045,537...81,045,537 JBrowse link
Q Uae40 Urinary albumin excretion QTL 40 IDA RGD PMID:20159938 RGD:7365117
Q Uae41 Urinary albumin excretion QTL 41 IDA RGD PMID:20159938 RGD:7365117
Q Uae42 Urinary albumin excretion QTL 42 IDA RGD PMID:20159938 RGD:7365117
Q Uae43 Urinary albumin excretion QTL 43 IDA RGD PMID:20159938 RGD:7365117
Q Uae44 Urinary albumin excretion QTL 44 IDA RGD PMID:20159938 RGD:7365117
Q Uae45 Urinary albumin excretion QTL 45 IDA RGD PMID:20159938 RGD:7365117
Q Uae46 Urinary albumin excretion QTL 46 IDA RGD PMID:20159938 RGD:7365117 NCBI chr 1:210,980,612...255,980,612 JBrowse link
urine albumin excretion rate to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf3 Renal disease susceptibility QTL 3 IDA RGD PMID:11053483 RGD:70856
urine albumin level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Uae10 Urinary albumin excretion QTL 10 IDA RGD PMID:12707388 RGD:634617 NCBI chr11:20,193,549...96,351,019 JBrowse link
Q Uae11 Urinary albumin excretion QTL 11 IDA RGD PMID:12707388 RGD:634617 NCBI chr13:47,354,258...94,285,672 JBrowse link
Q Uae12 Urinary albumin excretion QTL 12 IDA RGD PMID:12707388 RGD:634617 NCBI chr19:2,194,317...74,246,245 JBrowse link
Q Uae28 Urinary albumin excretion QTL 28 IDA RGD PMID:15161966 RGD:1300043 NCBI chr 6:45,153,786...90,153,786 JBrowse link
Q Uae29 Urinary albumin excretion QTL 29 IDA RGD PMID:15161966 RGD:1300043 NCBI chr19:36,289...74,246,245 JBrowse link
Q Uae5 Urinary albumin excretion QTL 5 IDA RGD PMID:12707388 RGD:634617 NCBI chr 1:160,111,426...262,090,599 JBrowse link
Q Uae6 Urinary albumin excretion QTL 6 IDA RGD PMID:12707388 RGD:634617 NCBI chr 2:80,396,034...220,931,416 JBrowse link
Q Uae7 Urinary albumin excretion QTL 7 IDA RGD PMID:12707388 RGD:634617 NCBI chr 6:93,560,258...136,550,638 JBrowse link
Q Uae8 Urinary albumin excretion QTL 8 IDA RGD PMID:12707388 RGD:634617 NCBI chr 8:39,106,258...103,375,958 JBrowse link
Q Uae9 Urinary albumin excretion QTL 9 IDA RGD PMID:12707388 RGD:634617 NCBI chr 9:64,220,169...109,220,169 JBrowse link
urine calcium excretion rate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Hc1 Hypercalciuria QTL 1 IDA RGD PMID:12819244 RGD:631855 NCBI chr 1:188,241,285...250,779,312 JBrowse link
Q Hc2 Hypercalciuria QTL 2 IDA RGD PMID:12819244 RGD:631855
Q Hc3 Hypercalciuria QTL 3 IDA RGD PMID:12819244 RGD:631855
Q Hc4 Hypercalciuria QTL 4 IDA RGD PMID:12819244 RGD:631855 NCBI chr10:1...38,832,698 JBrowse link
Q Hc5 Hypercalciuria QTL 5 IDA RGD PMID:12819244 RGD:631855 NCBI chr14:62,398,852...107,398,852 JBrowse link
Q Hc6 Hypercalciuria QTL 6 IDA RGD PMID:16611718 RGD:1582396 NCBI chr 1:203,995,416...244,113,296 JBrowse link
urine creatinine level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf7 Renal function QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:194,575,422...239,575,422 JBrowse link
urine electrolyte level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Uminl1 Urine mineral level QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:48,657,744...93,657,744 JBrowse link
Q Uminl2 Urine mineral level QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:44,510,974...89,510,974 JBrowse link
Q Uminl3 Urine mineral level QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:80,768,445...125,768,445 JBrowse link
Q Uminl4 Urine mineral level QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr14:59,848,686...104,848,686 JBrowse link
Q Uminl5 Urine mineral level QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr19:7,997,750...52,997,750 JBrowse link
urine norepinephrine level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cstrr1 Cold stress response QTL 1 IDA RGD PMID:15480093 RGD:1302892 NCBI chr 1:123,350,408...182,418,476 JBrowse link
urine potassium excretion rate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf26 Renal function QTL 26 IDA RGD PMID:14532335 RGD:727992 NCBI chr18:53,350,521...68,120,379 JBrowse link
Q Rf28 Renal function QTL 28 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:43,457,837...87,558,729 JBrowse link
urine potassium level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf29 Renal function QTL 29 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:43,457,837...87,558,729 JBrowse link
Q Rf30 Renal function QTL 30 IDA RGD PMID:11721057 RGD:70849 NCBI chr 3:59,863,663...87,321,459 JBrowse link
Q Rf31 Renal function QTL 31 IDA RGD PMID:11721057 RGD:70849 NCBI chr 4:40,490,442...75,726,188 JBrowse link
urine protein excretion rate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur12 Proteinuria QTL 12 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 2:114,032,149...150,226,270 JBrowse link
Q Pur13 Proteinuria QTL 13 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 3:98,651,826...167,012,663 JBrowse link
Q Pur14 Proteinuria QTL 14 IDA RGD PMID:16390874 RGD:1578625 NCBI chr17:7,985,243...16,523,460 JBrowse link
Q Pur15 Proteinuria QTL 15 IDA RGD PMID:16390874 RGD:1578625 NCBI chr20:8,043,920...15,089,182 JBrowse link
Q Pur3 Proteinuria QTL 3 IDA RGD PMID:14638907 RGD:730279
Q Pur31 Proteinuria QTL 31 IDA RGD PMID:21814219 RGD:6903249 NCBI chr 9:40,194,188...85,194,188 JBrowse link
Q Rf1 Renal disease susceptibility QTL 1 IDA RGD PMID:8528250 RGD:61060
urine protein excretion rate to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf4 Renal disease susceptibility QTL 4 IDA RGD PMID:11053483 RGD:70856
Q Rf5 Renal disease susceptibility QTL 5 IDA RGD PMID:11053483 RGD:70856
Q Rf52 Renal function QTL 52 IDA RGD PMID:16541022 RGD:1578626 NCBI chr 1:232,156,370...259,647,894 JBrowse link
Q Rf53 Renal function QTL 53 IDA RGD PMID:16541022 RGD:1578626 NCBI chr 3:56,395,968...161,299,569 JBrowse link
urine protein level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom22 Glomerulus QTL 22 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 1:1...34,184,556 JBrowse link
Q Glom23 Glomerulus QTL 23 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 2:196,140,964...251,540,988 JBrowse link
Q Glom25 Glomerulus QTL 25 IDA RGD PMID:16482158 RGD:2293335 NCBI chr10:2,103,708...47,103,708 JBrowse link
Q Glom26 Glomerulus QTL 26 IDA RGD PMID:16482158 RGD:2293335 NCBI chr15:14,926,594...71,614,418 JBrowse link
Q Pur1 Proteinuria QTL 1 IDA RGD PMID:9799838 RGD:619599 NCBI chr13:37,087,983...39,968,353 JBrowse link
Q Pur16 Proteinuria QTL 16 IDA RGD PMID:18064521 RGD:2292230
Q Pur2 Proteinuria QTL 2 IDA RGD PMID:12707388 RGD:634617 NCBI chr10:22,931,373...91,127,454 JBrowse link
Q Pur21 Proteinuria QTL 21 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 5:64,589,016...91,762,830 JBrowse link
Q Pur22 Proteinuria QTL 22 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 7:49,682,832...115,766,396 JBrowse link
Q Rf2 Renal disease susceptibility QTL 2 IDA RGD PMID:8528250 RGD:61060 NCBI chr 1:142,582,180...153,680,016 JBrowse link
urine sodium level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf27 Renal function QTL 27 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:30,708,375...87,558,729 JBrowse link
urine total protein excretion rate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur17 Proteinuria QTL 17 IDA RGD PMID:19448344 RGD:2312387 NCBI chr 1:172,718,770...228,180,370 JBrowse link
Q Pur18 Proteinuria QTL 18 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 5:6,922,282...37,468,560 JBrowse link
Q Pur19 Proteinuria QTL 19 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 4:59,836,842...104,836,842 JBrowse link
Q Pur20 Proteinuria QTL 20 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 6:131,392,689...143,944,780 JBrowse link
Q Pur24 Proteinuria QTL 24 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 2:171,994,826...205,135,428 JBrowse link
Q Pur25 Proteinuria QTL 25 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 6:63,037,319...95,934,232 JBrowse link
Q Pur26 Proteinuria QTL 26 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 9:85,262,459...109,044,727 JBrowse link
Q Pur27 Proteinuria QTL 27 IDA RGD PMID:20876844 RGD:4889613 NCBI chr20:1...27,341,128 JBrowse link
Q Pur28 Proteinuria QTL 28 IDA RGD PMID:20876844 RGD:4889613 NCBI chr11:58,928,336...99,753,367 JBrowse link
Q Pur29 Proteinuria QTL 29 IDA RGD PMID:20876844 RGD:4889613 NCBI chr13:39,968,211...83,286,298 JBrowse link
Q Pur30 Proteinuria QTL 30 IDA RGD PMID:20876844 RGD:4889613 NCBI chr20:8,043,920...29,865,039 JBrowse link
Q Pur32 Proteinuria QTL 32 IDA RGD PMID:24192394 RGD:8552897 NCBI chr13:72,984,506...99,745,408 JBrowse link
Q Pur33 Proteinuria QTL 33 IDA RGD PMID:27113531 RGD:11353859 NCBI chr 9:44,649,921...89,649,921 JBrowse link
Q Pur4 Proteinuria QTL 4 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:160,111,531...262,090,437 JBrowse link
Q Pur5 Proteinuria QTL 5 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:39,106,258...103,375,958 JBrowse link
Q Pur6 Proteinuria QTL 6 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 9:64,220,169...109,220,169 JBrowse link
Q Pur7 Proteinuria QTL 7 IDA RGD PMID:16534143 RGD:1578520
Q Pur8 Proteinuria QTL 8 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 6:72,227,641...130,729,205 JBrowse link
Q Rf44 Renal function QTL 44 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:15,642,280...31,610,627 JBrowse link
Term paths to the root
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Term Annotations click to browse term
  clinical measurement 2369
    renal/urinary measurement 250
      urine measurement 117
        urine 8-hydroxy-2'-deoxyguanosine level 0
        urine aldosterone measurement + 0
        urine bilirubin level 0
        urine catecholamine measurement + 2
        urine color 0
        urine component excretion rate measurement + 77
        urine creatine measurement + 0
        urine creatinine measurement + 6
        urine electrolyte measurement + 17
        urine glucose level 0
        urine ketone body level + 0
        urine mass + 0
        urine mineral measurement + 0
        urine osmolality 0
        urine pH 0
        urine protein measurement + 89
        urine specific gravity 0
        urine steroid level + 0
        urine taurine measurement + 0
        urine urea level + 0
        urine volume + 3
paths to the root