Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:body fat morphological measurement
go back to main search page
Accession:CMO:0000089 term browser browse the term
Definition:Measurement of adipose tissue in entire body or region of body of an organism.
Synonyms:exact_synonym: adipose tissue measurement
 narrow_synonym: body fat distribution
 xref: EFO:0004341;   EFO:0004764


show annotations for term's descendants           Sort by:
abdominal fat pad weight term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw116 Body weight QTL 116 IDA 0.016 4.1 RGD PMID:11071303 RGD:619669 NCBI chr 1:233,480,549...270,108,840 JBrowse link
Q Bw118 Body weight QTL 118 IDA 3.55 RGD PMID:10373320 RGD:619678 NCBI chr 6:33,309,549...57,730,294 JBrowse link
Q Bw121 Body weight QTL 121 IDA 3.56 RGD PMID:10373320 RGD:619678 NCBI chr11:1...21,836,709 JBrowse link
abdominal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Abfw1 Abdominal fat weight QTL 1 IDA 0.001 11.7 RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Abfw2 Abdominal fat weight QTL 2 IDA 0.001 16.58 RGD PMID:25003539 RGD:8694157 NCBI chr 3:28,249,687...73,249,687 JBrowse link
Q Abfw3 Abdominal fat weight QTL 3 IDA 0.001 16.13 RGD PMID:25003539 RGD:8694157 NCBI chr 5:111,416,838...156,416,838 JBrowse link
Q Abfw4 Abdominal fat weight QTL 4 IDA 0.001 9.07 RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Abfw5 Abdominal fat weight QTL 5 IDA 0.001 14.99 RGD PMID:25003539 RGD:8694157
Q Abfw6 Abdominal fat weight QTL 6 IDA 0.001 10.2 RGD PMID:25003539 RGD:8694157 NCBI chr15:1...34,723,002 JBrowse link
Q Abfw7 Abdominal fat weight QTL 7 IDA 0.001 12.22 RGD PMID:25003539 RGD:8694157 NCBI chr16:52,726,464...84,729,064 JBrowse link
Q Abfw8 Abdominal fat weight QTL 8 IDA 0.001 6.38 RGD PMID:25003539 RGD:8694157 NCBI chr18:46,640,675...83,828,827 JBrowse link
Q Bw117 Body weight QTL 117 IDA 3.58 RGD PMID:10373320 RGD:619678 NCBI chr 3:39,454,637...53,296,578 JBrowse link
Q Bw119 Body weight QTL 119 IDA 5.44 RGD PMID:10373320 RGD:619678 NCBI chr 7:27,828,949...27,829,089 JBrowse link
abdominal subcutaneous fat pad weight term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scfw1 Subcutaneous fat weight QTL 1 IDA 0.001 5.8 RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Scfw2 Subcutaneous fat weight QTL 2 IDA 0.001 5.54 RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...31,934,116 JBrowse link
Q Scfw3 Subcutaneous fat weight QTL 3 IDA 0.001 4.57 RGD PMID:25003539 RGD:8694157 NCBI chr 6:1...41,223,769 JBrowse link
Q Scfw4 Subcutaneous fat weight QTL 4 IDA 0.001 3.37 RGD PMID:25003539 RGD:8694157
Q Scfw5 Subcutaneous fat weight QTL 5 IDA 0.001 5.55 RGD PMID:25003539 RGD:8694157 NCBI chr 9:1...37,999,212 JBrowse link
Q Scfw6 Subcutaneous fat weight QTL 6 IDA 0.001 8.62 RGD PMID:25003539 RGD:8694157
adipose tissue molecular composition measurement term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw175 Body weight QTL 175 IDA 4.1 RGD PMID:25296178 RGD:10402111 NCBI chr 8:75,311,777...84,531,599 JBrowse link
epididymal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw77 Body weight QTL 77 IDA 0.0025 3.2 RGD PMID:15728334 RGD:1580752 NCBI chr 3:53,184,593...64,655,484 JBrowse link
Q Bw78 Body weight QTL 78 IDA 0.0016 3.2 RGD PMID:15728334 RGD:1580752 NCBI chr 5:119,085,612...128,034,027 JBrowse link
Q Bw79 Body weight QTL 79 IDA 2.0E-4 4.0 RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Epfw1 Epididymal fat weight QTL 1 IDA 6.0E-4 4.5 RGD PMID:15728334 RGD:1580752 NCBI chr 3:53,184,593...115,665,732 JBrowse link
Q Epfw10 Epididymal fat weight QTL 10 IDA 0.001 9.29 RGD PMID:25003539 RGD:8694157 NCBI chr11:23,280,456...68,280,456 JBrowse link
Q Epfw11 Epididymal fat weight QTL 11 IDA 0.001 6.0 RGD PMID:25003539 RGD:8694157 NCBI chr14:55,624,247...100,624,247 JBrowse link
Q Epfw12 Epididymal fat weight QTL 12 IDA 0.001 17.08 RGD PMID:25003539 RGD:8694157 NCBI chr18:46,640,675...83,828,827 JBrowse link
Q Epfw2 Epididymal fat weight QTL 2 IDA 5.0E-4 3.2 RGD PMID:15728334 RGD:1580752 NCBI chr 8:31,737,729...76,737,729 JBrowse link
Q Epfw3 Epididymal fat weight QTL 3 IDA 2.0E-4 4.1 RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Epfw4 Epididymal fat weight QTL 4 IDA 0.0058 3.5 RGD PMID:15728334 RGD:1580752 NCBI chr17:9,201,365...23,653,323 JBrowse link
Q Epfw5 Epididymal fat weight QTL 5 IDA 4.4 RGD PMID:24099777 RGD:8552892 NCBI chr 1:193,113,876...238,113,876 JBrowse link
Q Epfw6 Epididymal fat weight QTL 6 IDA 0.001 7.47 RGD PMID:25003539 RGD:8694157 NCBI chr 2:223,389,739...249,053,267 JBrowse link
Q Epfw7 Epididymal fat weight QTL 7 IDA 0.001 20.66 RGD PMID:25003539 RGD:8694157 NCBI chr 5:49,463,600...94,463,600 JBrowse link
Q Epfw8 Epididymal fat weight QTL 8 IDA 0.001 11.78 RGD PMID:25003539 RGD:8694157
Q Epfw9 Epididymal fat weight QTL 9 IDA 0.001 19.24 RGD PMID:25003539 RGD:8694157 NCBI chr10:44,441,699...89,441,699 JBrowse link
inguinal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw62 Body weight QTL62 IDA 4.05 RGD PMID:11374884 RGD:1357168 NCBI chr 1:22,340,647...67,340,647 JBrowse link
Q Bw94 Body weight QTL 94 IDA 0.01 RGD PMID:19584880 RGD:2312642 NCBI chr 3:98,535,255...168,026,850 JBrowse link
Q Bw95 Body weight QTL 95 IDA 0.05 RGD PMID:19584880 RGD:2312642 NCBI chr16:832,236...59,492,508 JBrowse link
intramuscular fat area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw61 Body weight QTL61 IDA 1.0E-4 3.4 RGD PMID:11853145 RGD:619672 NCBI chr 1:173,108,781...218,108,781 JBrowse link
mesenteric fat pad weight to body weight ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw1 Body weight QTL1 IDA 5.09 RGD PMID:11087657 RGD:619690 NCBI chr 2:43,171,017...83,575,226 JBrowse link
Q Bw3 Body weight QTL3 IDA 5.9 RGD PMID:11087657 RGD:619690 NCBI chr 8:69,349,194...112,783,834 JBrowse link
retroperitoneal fat pad weight term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw125 Body weight QTL 125 IEP 0.0047 3.0 RGD PMID:20159938 RGD:7365117 NCBI chr10:64,890,616...107,211,142 JBrowse link
retroperitoneal fat pad weight to body weight ratio term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw166 Body weight QTL 166 IDA 0.001 14.08 RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Bw167 Body weight QTL 167 IDA 0.001 22.46 RGD PMID:25003539 RGD:8694157 NCBI chr 3:91,797,474...136,797,474 JBrowse link
Q Bw168 Body weight QTL 168 IDA 0.001 9.57 RGD PMID:25003539 RGD:8694157 NCBI chr 4:40,433,414...85,433,414 JBrowse link
Q Bw169 Body weight QTL 169 IDA 0.001 17.61 RGD PMID:25003539 RGD:8694157 NCBI chr 5:111,416,838...156,416,838 JBrowse link
Q Bw170 Body weight QTL 170 IDA 0.001 12.07 RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Bw171 Body weight QTL 171 IDA 0.001 16.22 RGD PMID:25003539 RGD:8694157
Q Bw172 Body weight QTL 172 IDA 0.001 8.33 RGD PMID:25003539 RGD:8694157 NCBI chr16:24,325,513...69,325,513 JBrowse link
Q Bw2 Body weight QTL2 IDA 4.2 RGD PMID:11087657 RGD:619690 NCBI chr 4:9,940,885...44,463,908 JBrowse link
Q Bw4 Body weight QTL4 IDA 5.31 RGD PMID:11087657 RGD:619690 NCBI chr 9:5,109,826...50,109,826 JBrowse link
Q Bw5 Body weight QTL5 IDA 5.43 RGD PMID:11087657 RGD:619690 NCBI chr14:11,030,812...30,320,092 JBrowse link
Q Bw60 Body weight QTL60 IDA 4.51 RGD PMID:11087657 RGD:619690 NCBI chr14:79,950,921...95,876,975 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      body fat morphological measurement 53
        adipose tissue molecular composition measurement + 1
        body density 0
        body fat volume + 0
        body region fat morphological measurement + 51
        calculated body fat morphological measurement + 41
        intramuscular fat morphological measurement + 1
        total body fat mass + 0
paths to the root