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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:kidney morphological measurement
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Accession:CMO:0000087 term browser browse the term
Definition:Measurement of the physical form or structure of one or both kidneys, the organ which functions to maintain proper water and electrolyte balance, regulate acid-base concentration, and filter the blood of metabolic wastes.
Synonyms:exact_synonym: renal morphological measurement


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both kidneys wet weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm29 Kidney mass QTL 29 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:218,829,748...263,829,748 JBrowse link
Q Kidm30 Kidney mass QTL 30 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:85,062,224...136,118,980 JBrowse link
Q Kidm31 Kidney mass QTL 31 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 8:49,245,178...94,245,178 JBrowse link
Q Kidm32 Kidney mass QTL 32 IDA RGD PMID:15728334 RGD:1580752 NCBI chr17:9,206,505...23,859,062 JBrowse link
Q Kidm43 Kidney mass QTL 43 IDA RGD PMID:24192394 RGD:8552897 NCBI chr 4:37,269,577...82,269,577 JBrowse link
Q Kidm48 Kidney mass QTL 48 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 4:147,299,608...184,426,481 JBrowse link
Q Kidm49 Kidney mass QTL 49 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:20,097,635...65,097,635 JBrowse link
Q Kidm50 Kidney mass QTL 50 IDA RGD PMID:25707311 RGD:10045846 NCBI chr10:922,197...45,922,197 JBrowse link
Q Kidm51 Kidney mass QTL 51 IDA RGD PMID:25707311 RGD:10045846 NCBI chr15:2,785,923...47,785,923 JBrowse link
Q Kidm52 Kidney mass QTL 52 IDA RGD PMID:25707311 RGD:10045846 NCBI chr17:1...31,706,603 JBrowse link
Q Kidm54 Kidney mass QTL 54 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:20,097,635...65,097,635 JBrowse link
both kidneys wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm22 Kidney mass QTL 22 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 1:212,738,576...257,738,576 JBrowse link
Q Kidm23 Kidney mass QTL 23 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:27,148,328...159,440,891 JBrowse link
Q Kidm24 Kidney mass QTL 24 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:27,148,328...159,440,891 JBrowse link
Q Kidm25 Kidney mass QTL 25 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 5:95,062,526...133,270,832 JBrowse link
Q Kidm26 Kidney mass QTL 26 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 8:35,464,071...107,982,864 JBrowse link
Q Kidm27 Kidney mass QTL 27 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:27,148,328...159,440,891 JBrowse link
Q Kidm28 Kidney mass QTL 28 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:27,148,328...159,440,891 JBrowse link
Q Kidm33 Kidney mass QTL 33 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 1:197,807,365...233,480,676 JBrowse link
Q Kidm34 Kidney mass QTL 34 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 4:149,763,204...169,799,698 JBrowse link
Q Kidm35 Kidney mass QTL 35 IDA RGD PMID:16700878 RGD:1626643 NCBI chr 1:208,798,288...253,798,288 JBrowse link
Q Kidm36 Kidney mass QTL 36 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:184,482,291...229,482,291 JBrowse link
Q Kidm37 Kidney mass QTL 37 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:96,509,147...141,509,147 JBrowse link
Q Kidm38 Kidney mass QTL 38 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:84,503,487...96,432,422 JBrowse link
Q Kidm39 Kidney mass QTL 39 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:15,905,802...60,905,802 JBrowse link
Q Kidm40 Kidney mass QTL 40 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:42,388,164...87,388,164 JBrowse link
Q Kidm44 Kidney mass QTL 44 IDA RGD PMID:25707311 RGD:10045846
Q Kidm45 Kidney mass QTL 45 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 7:9,460,877...54,460,877 JBrowse link
Q Kidm46 Kidney mass QTL 46 IDA RGD PMID:25707311 RGD:10045846 NCBI chr12:11,743,528...52,308,831 JBrowse link
Q Kidm47 Kidney mass QTL 47 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 7:49,137,999...67,614,020 JBrowse link
Q Kidm53 Kidney mass QTL 53 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 3:28,625,339...67,641,995 JBrowse link
Q Kidm56 Kidney mass QTL 56 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:154,723,085...178,247,591 JBrowse link
Q Kidm57 Kidney mass QTL 57 IDA RGD PMID:17143582 RGD:1599557
Q Kidm58 Kidney mass QTL 58 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,817,119...107,713,808 JBrowse link
Q Kidm59 Kidney mass QTL 59 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:7,065,728...52,065,728 JBrowse link
Q Kidm60 Kidney mass QTL 60 IDA RGD PMID:17143582 RGD:1599557
Q Kidm61 Kidney mass QTL 61 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:154,723,085...199,723,085 JBrowse link
Q Kidm62 Kidney mass QTL 62 IDA RGD PMID:17143582 RGD:1599557
Q Kidm63 Kidney mass QTL 63 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:38,708,931...67,641,995 JBrowse link
Q Kidm64 Kidney mass QTL 64 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:141,555,229...186,555,229 JBrowse link
Q Kidm65 Kidney mass QTL 65 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:62,848,139...107,848,139 JBrowse link
Q Kidm66 Kidney mass QTL 66 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,817,119...107,713,808 JBrowse link
Q Kidm67 Kidney mass QTL 67 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:90,904,245...95,604,677 JBrowse link
Q Kidm68 Kidney mass QTL 68 IDA RGD PMID:17143582 RGD:1599557
Q Kidm69 Kidney mass QTL 69 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:839,230...4,234,212 JBrowse link
Q Kidm70 Kidney mass QTL 70 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:23,858,926...68,858,926 JBrowse link
Q Kidm71 Kidney mass QTL 71 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:33,379,158...78,379,158 JBrowse link
Q Kidm72 Kidney mass QTL 72 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:26,822,186...71,822,186 JBrowse link
Q Kidm73 Kidney mass QTL 73 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:12,219,237...26,822,399 JBrowse link
Q Kidm8 Kidney mass QTL 8 IDA cyst size RGD PMID:9097967 RGD:629573 NCBI chr 5:38,011,670...83,011,670 JBrowse link
calculated kidney weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm1 Kidney mass QTL 1 IDA RGD PMID:12707388 RGD:634617 NCBI chr 1:223,134,011...262,090,599 JBrowse link
Q Kidm17 Kidney mass QTL 17 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:83,465,462...229,820,014 JBrowse link
Q Kidm18 Kidney mass QTL 18 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:160,573,753...266,453,731 JBrowse link
Q Kidm19 Kidney mass QTL 19 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:160,573,753...210,707,719 JBrowse link
Q Kidm2 Kidney mass QTL 2 IDA RGD PMID:12707388 RGD:634617 NCBI chr18:61,446,853...86,134,022 JBrowse link
Q Kidm20 Kidney mass QTL 20 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:186,658,830...266,453,731 JBrowse link
Q Kidm3 Kidney mass QTL 3 IDA RGD PMID:12707388 RGD:634617 NCBI chr19:46,226,778...74,246,245 JBrowse link
compensatory renal growth score term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coreg1 Compensatory renal growth QTL 1 IDA RGD PMID:10732705 RGD:69708 NCBI chr 6:14,599,473...63,457,687 JBrowse link
Q Coreg2 Compensatory renal growth QTL 2 IDA RGD PMID:10864582 RGD:61071 NCBI chr 4:150,095,743...159,267,220 JBrowse link
count of superficial glomeruli directly contacting the kidney surface term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom2 Glomerulus QTL 2 IDA RGD PMID:12397040 RGD:634618 NCBI chr 1:232,312,773...270,518,180 JBrowse link
Q Glom3 Glomerulus QTL 3 IDA RGD PMID:12397040 RGD:634618
Q Glom8 Glomerulus QTL 8 IDA RGD PMID:14638907 RGD:730279
count of superficial glomeruli not directly contacting the kidney surface term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom1 Glomerulus QTL 1 IDA RGD PMID:12397040 RGD:634618
Q Glom4 Glomerulus QTL 4 IDA RGD PMID:14638907 RGD:730279 NCBI chr 2:22,038,044...67,038,044 JBrowse link
Q Glom5 Glomerulus QTL 5 IDA RGD PMID:14638907 RGD:730279 NCBI chr 7:98,549,867...137,014,596 JBrowse link
Q Glom6 Glomerulus QTL 6 IDA RGD PMID:14638907 RGD:730279
Q Glom7 Glomerulus QTL 7 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:76,937,178...121,937,178 JBrowse link
kidney 20-HETE level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf54 Renal function QTL 54 IDA RGD PMID:16396943 RGD:1578407 NCBI chr 5:133,270,647...172,190,305 JBrowse link
kidney glomerulus diameter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf20 Renal function QTL 20 IDA RGD PMID:14532335 RGD:727992 NCBI chr11:31,915,469...76,915,469 JBrowse link
kidney renin level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf47 Renal function QTL 47 IDA RGD PMID:15452030 RGD:1302893 NCBI chr13:11,081,740...103,588,154 JBrowse link
kidney weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm55 Kidney mass QTL 55 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 7:72,725,037...117,725,037 JBrowse link
left kidney wet weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm10 Kidney mass QTL 10 IDA RGD PMID:11721057 RGD:70849 NCBI chr 7:82,111,245...123,048,330 JBrowse link
Q Kidm14 Kidney mass QTL 14 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:1...36,045,694 JBrowse link
Q Kidm15 Kidney mass QTL 15 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:165,707,719...210,707,719 JBrowse link
Q Kidm16 Kidney mass QTL 16 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:83,465,462...225,110,681 JBrowse link
Q Kidm42 Kidney mass QTL 42 IDA RGD PMID:20159938 RGD:7365117
Q Kidm5 Kidney mass QTL 5 IDA RGD PMID:14532335 RGD:727992 NCBI chr 7:92,388,565...119,280,177 JBrowse link
left kidney wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm7 Kidney mass QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr15:88,677,086...104,695,021 JBrowse link
right kidney wet weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm11 Kidney mass QTL 11 IDA RGD PMID:11721057 RGD:70849 NCBI chr12:16,187,438...52,308,831 JBrowse link
Q Kidm12 Kidney mass QTL 12 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:160,573,753...210,707,719 JBrowse link
Q Kidm13 Kidney mass QTL 13 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 3:42,158,111...124,558,371 JBrowse link
Q Kidm21 Kidney mass QTL 21 IDA RGD PMID:15452030 RGD:1302893 NCBI chr10:15,533,012...73,695,498 JBrowse link
Q Kidm9 Kidney mass QTL 9 IDA RGD PMID:11721057 RGD:70849 NCBI chr 7:82,111,245...134,948,181 JBrowse link
right kidney wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm4 Kidney mass QTL 4 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:141,508,991...177,728,348 JBrowse link
single kidney wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm41 Kidney mass QTL 41 IDA RGD PMID:19448344 RGD:2312387 NCBI chr12:5,921,918...25,247,790 JBrowse link
Q Kidm6 Kidney mass QTL 6 IDA RGD PMID:14532335 RGD:727992 NCBI chr13:71,610,804...89,333,251 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 733
      organ morphological measurement 286
        kidney morphological measurement 86
          calculated kidney morphological measurement + 0
          kidney cellular composition measurement + 0
          kidney molecular composition measurement + 2
          kidney tubule regeneration foci count 0
          kidney weight + 75
          nephron morphological measurement + 9
          renal cortex morphological measurement + 0
paths to the root