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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:kidney morphological measurement
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Accession:CMO:0000087 term browser browse the term
Definition:Measurement of the physical form or structure of one or both kidneys, the organ which functions to maintain proper water and electrolyte balance, regulate acid-base concentration, and filter the blood of metabolic wastes.



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both kidneys wet weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm29 Kidney mass QTL 29 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:179,567,751...260,522,016 JBrowse link
Q Kidm30 Kidney mass QTL 30 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:64,655,305...115,665,732 JBrowse link
Q Kidm31 Kidney mass QTL 31 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 8:54,237,644...85,365,202 JBrowse link
Q Kidm32 Kidney mass QTL 32 IDA RGD PMID:15728334 RGD:1580752 NCBI chr17:9,201,365...23,653,323 JBrowse link
Q Kidm43 Kidney mass QTL 43 IDA RGD PMID:24192394 RGD:8552897 NCBI chr 4:36,303,261...103,194,984 JBrowse link
Q Kidm48 Kidney mass QTL 48 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 4:145,568,712...182,687,754 JBrowse link
Q Kidm49 Kidney mass QTL 49 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:14,368,788...59,368,788 JBrowse link
Q Kidm50 Kidney mass QTL 50 IDA RGD PMID:25707311 RGD:10045846 NCBI chr10:418,344...45,418,344 JBrowse link
Q Kidm51 Kidney mass QTL 51 IDA RGD PMID:25707311 RGD:10045846 NCBI chr15:306,329...45,306,329 JBrowse link
Q Kidm52 Kidney mass QTL 52 IDA RGD PMID:25707311 RGD:10045846 NCBI chr17:1...31,701,463 JBrowse link
Q Kidm54 Kidney mass QTL 54 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:14,368,788...59,368,788 JBrowse link
both kidneys wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm22 Kidney mass QTL 22 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 1:210,702,053...240,947,965 JBrowse link
Q Kidm23 Kidney mass QTL 23 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm24 Kidney mass QTL 24 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm25 Kidney mass QTL 25 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 5:90,067,849...128,034,027 JBrowse link
Q Kidm26 Kidney mass QTL 26 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 8:27,205,715...99,103,503 JBrowse link
Q Kidm27 Kidney mass QTL 27 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm28 Kidney mass QTL 28 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm33 Kidney mass QTL 33 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 1:188,377,360...224,054,420 JBrowse link
Q Kidm34 Kidney mass QTL 34 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 4:148,090,542...168,069,246 JBrowse link
Q Kidm35 Kidney mass QTL 35 IDA RGD PMID:16700878 RGD:1626643 NCBI chr 1:199,368,955...224,569,684 JBrowse link
Q Kidm36 Kidney mass QTL 36 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:190,613,715...226,808,892 JBrowse link
Q Kidm37 Kidney mass QTL 37 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:70,653,097...121,056,321 JBrowse link
Q Kidm38 Kidney mass QTL 38 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:84,007,272...95,933,025 JBrowse link
Q Kidm39 Kidney mass QTL 39 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:2,851,709...15,884,239 JBrowse link
Q Kidm40 Kidney mass QTL 40 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:37,479,847...82,479,847 JBrowse link
Q Kidm44 Kidney mass QTL 44 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 1:191,033,875...236,033,875 JBrowse link
Q Kidm45 Kidney mass QTL 45 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 7:7,573,985...52,573,985 JBrowse link
Q Kidm46 Kidney mass QTL 46 IDA RGD PMID:25707311 RGD:10045846 NCBI chr12:6,107,579...46,669,029 JBrowse link
Q Kidm47 Kidney mass QTL 47 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 7:47,251,783...65,728,867 JBrowse link
Q Kidm53 Kidney mass QTL 53 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 3:8,227,194...47,233,430 JBrowse link
Q Kidm56 Kidney mass QTL 56 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...175,950,118 JBrowse link
Q Kidm57 Kidney mass QTL 57 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:31,426,403...70,668,733 JBrowse link
Q Kidm58 Kidney mass QTL 58 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...67,750,281 JBrowse link
Q Kidm59 Kidney mass QTL 59 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:6,791,251...12,205,285 JBrowse link
Q Kidm60 Kidney mass QTL 60 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:137,219,876...142,323,610 JBrowse link
Q Kidm61 Kidney mass QTL 61 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...185,122,374 JBrowse link
Q Kidm62 Kidney mass QTL 62 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:142,323,368...146,786,035 JBrowse link
Q Kidm63 Kidney mass QTL 63 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:18,311,454...47,233,430 JBrowse link
Q Kidm64 Kidney mass QTL 64 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:145,925,360...166,177,555 JBrowse link
Q Kidm65 Kidney mass QTL 65 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:43,296,169...98,968,765 JBrowse link
Q Kidm66 Kidney mass QTL 66 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...68,164,786 JBrowse link
Q Kidm67 Kidney mass QTL 67 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:90,404,397...107,211,142 JBrowse link
Q Kidm68 Kidney mass QTL 68 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:71,115,217...72,606,468 JBrowse link
Q Kidm69 Kidney mass QTL 69 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:832,380...4,227,609 JBrowse link
Q Kidm70 Kidney mass QTL 70 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:23,653,184...70,974,005 JBrowse link
Q Kidm71 Kidney mass QTL 71 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:52,539,763...76,104,388 JBrowse link
Q Kidm72 Kidney mass QTL 72 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:26,548,082...46,969,551 JBrowse link
Q Kidm73 Kidney mass QTL 73 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:11,944,273...26,548,295 JBrowse link
Q Kidm8 Kidney mass QTL 8 IDA cyst size RGD PMID:9097967 RGD:629573 NCBI chr 5:33,215,665...78,215,665 JBrowse link
calculated kidney weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm1 Kidney mass QTL 1 IDA RGD PMID:12707388 RGD:634617 NCBI chr 1:213,707,201...252,085,212 JBrowse link
Q Kidm17 Kidney mass QTL 17 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:81,754,530...227,146,641 JBrowse link
Q Kidm18 Kidney mass QTL 18 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...256,448,636 JBrowse link
Q Kidm19 Kidney mass QTL 19 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Kidm2 Kidney mass QTL 2 IDA RGD PMID:12707388 RGD:634617 NCBI chr18:59,172,115...83,828,827 JBrowse link
Q Kidm20 Kidney mass QTL 20 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:177,227,632...256,448,636 JBrowse link
Q Kidm3 Kidney mass QTL 3 IDA RGD PMID:12707388 RGD:634617 NCBI chr19:29,322,490...57,337,602 JBrowse link
compensatory renal growth score term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coreg1 Compensatory renal growth QTL 1 IDA RGD PMID:10732705 RGD:69708 NCBI chr 6:35,691,618...57,730,540 JBrowse link
Q Coreg2 Compensatory renal growth QTL 2 IDA RGD PMID:10864582 RGD:61071 NCBI chr 4:148,423,102...157,580,971 JBrowse link
count of superficial glomeruli directly contacting the kidney surface term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom2 Glomerulus QTL 2 IDA RGD PMID:12397040 RGD:634618 NCBI chr 1:222,363,780...260,522,016 JBrowse link
Q Glom3 Glomerulus QTL 3 IDA RGD PMID:12397040 RGD:634618
Q Glom8 Glomerulus QTL 8 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:86,894,788...131,894,788 JBrowse link
count of superficial glomeruli not directly contacting the kidney surface term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom1 Glomerulus QTL 1 IDA RGD PMID:12397040 RGD:634618 NCBI chr  X:75,294,106...120,294,106 JBrowse link
Q Glom4 Glomerulus QTL 4 IDA RGD PMID:14638907 RGD:730279 NCBI chr 2:20,304,672...65,304,672 JBrowse link
Q Glom5 Glomerulus QTL 5 IDA RGD PMID:14638907 RGD:730279 NCBI chr 7:96,670,164...135,012,528 JBrowse link
Q Glom6 Glomerulus QTL 6 IDA RGD PMID:14638907 RGD:730279 NCBI chr 9:64,573,531...109,573,531 JBrowse link
Q Glom7 Glomerulus QTL 7 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:71,201,409...116,201,409 JBrowse link
kidney 20-HETE level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf54 Renal function QTL 54 IDA RGD PMID:16396943 RGD:1578407 NCBI chr 5:128,033,842...133,011,550 JBrowse link
kidney glomerulus diameter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf20 Renal function QTL 20 IDA RGD PMID:14532335 RGD:727992 NCBI chr11:29,528,418...60,324,829 JBrowse link
kidney renin level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf47 Renal function QTL 47 IDA RGD PMID:15452030 RGD:1302893 NCBI chr13:30,395,351...101,056,920 JBrowse link
kidney weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm55 Kidney mass QTL 55 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 7:70,840,118...72,474,897 JBrowse link
left kidney wet weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm10 Kidney mass QTL 10 IDA RGD PMID:11721057 RGD:70849 NCBI chr 7:80,221,299...125,221,299 JBrowse link
Q Kidm14 Kidney mass QTL 14 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:4,299,130...35,837,242 JBrowse link
Q Kidm15 Kidney mass QTL 15 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:156,677,124...201,278,233 JBrowse link
Q Kidm16 Kidney mass QTL 16 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:81,754,530...222,436,696 JBrowse link
Q Kidm42 Kidney mass QTL 42 IDA RGD PMID:20159938 RGD:7365117
Q Kidm5 Kidney mass QTL 5 IDA RGD PMID:14532335 RGD:727992 NCBI chr 7:43,747,012...135,012,528 JBrowse link
left kidney wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm7 Kidney mass QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr15:82,262,520...98,288,169 JBrowse link
right kidney wet weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm11 Kidney mass QTL 11 IDA RGD PMID:11721057 RGD:70849 NCBI chr12:11,073,825...24,234,895 JBrowse link
Q Kidm12 Kidney mass QTL 12 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Kidm13 Kidney mass QTL 13 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 3:41,874,578...104,104,347 JBrowse link
Q Kidm21 Kidney mass QTL 21 IDA RGD PMID:15452030 RGD:1302893 NCBI chr10:15,028,513...60,430,477 JBrowse link
Q Kidm9 Kidney mass QTL 9 IDA RGD PMID:11721057 RGD:70849 NCBI chr 7:80,221,299...112,308,525 JBrowse link
right kidney wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm4 Kidney mass QTL 4 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:121,056,165...157,309,487 JBrowse link
single kidney wet weight to body weight ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kidm41 Kidney mass QTL 41 IDA RGD PMID:19448344 RGD:2312387 NCBI chr12:1...19,611,090 JBrowse link
Q Kidm6 Kidney mass QTL 6 IDA RGD PMID:14532335 RGD:727992 NCBI chr13:69,060,519...86,800,898 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  clinical measurement 2369
    body morphological measurement 763
      organ morphological measurement 286
        kidney morphological measurement 86
          calculated kidney morphological measurement + 0
          kidney cellular composition measurement + 0
          kidney molecular composition measurement + 2
          kidney tubule regeneration foci count 0
          kidney weight + 75
          nephron morphological measurement + 9
          renal cortex morphological measurement + 0
paths to the root