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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:blood lipid measurement
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Accession:CMO:0000050 term browser browse the term
Definition:Any value resulting from the quantification of a morphological or physiological parameter of a blood-derived lipid, any of a structurally diverse group of organic compounds found in blood that are insoluble in water but soluble innonpolar solvents that, among other biological functions, serve as a source of fuel and are an important constituent of cell structure.
Synonyms:exact_synonym: lipid measurement
 narrow_synonym: alpha-linoleic acid measurement;   linolenic acid measurement
 broad_synonym: lipid or lipoprotein measurement
 xref: EFO:0004529;   EFO:0005105;   EFO:0006811;   EFO:0008350


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blood high density lipoprotein cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl32 Serum cholesterol level QTL 32 IDA 5.4 RGD PMID:15452030 RGD:1302893
Q Scl76 Serum cholesterol level QTL 76 IDA 0.01 3.6 RGD PMID:25296178 RGD:10402111 NCBI chr 4:50,143,926...58,080,146 JBrowse link
Q Scl77 Serum cholesterol level QTL 77 IDA 0.01 4.1 RGD PMID:25296178 RGD:10402111 NCBI chr 4:50,143,926...58,080,146 JBrowse link
blood lipoprotein triglyceride level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl33 Serum triglyceride level QTL 33 IDA 0.05 3.4 RGD PMID:25296178 RGD:10402111 NCBI chr 3:58,601,291...71,157,804 JBrowse link
Q Stl34 Serum triglyceride level QTL 34 IDA 0.05 3.5 RGD PMID:25296178 RGD:10402111
blood low density lipoprotein cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl69 Serum cholesterol level QTL 69 IDA 0.001 6.3 RGD PMID:25296178 RGD:10402111
Q Scl70 Serum cholesterol level QTL 70 IDA 0.001 4.7 RGD PMID:25296178 RGD:10402111
Q Scl71 Serum cholesterol level QTL 71 IDA 0.001 5.8 RGD PMID:25296178 RGD:10402111 NCBI chr 3:2,904,329...47,904,329 JBrowse link
Q Scl72 Serum cholesterol level QTL 72 IDA 0.001 4.4 RGD PMID:25296178 RGD:10402111 NCBI chr 3:2,904,329...47,904,329 JBrowse link
Q Scl73 Serum cholesterol level QTL 73 IDA 0.001 4.7 RGD PMID:25296178 RGD:10402111 NCBI chr 3:2,904,329...47,904,329 JBrowse link
Q Scl74 Serum cholesterol level QTL 74 IDA 0.001 5.8 RGD PMID:25296178 RGD:10402111 NCBI chr 3:58,601,291...71,157,804 JBrowse link
Q Scl75 Serum cholesterol level QTL 75 IDA 0.001 4.4 RGD PMID:25296178 RGD:10402111 NCBI chr 3:58,601,291...71,157,804 JBrowse link
Q Scl78 Serum cholesterol level QTL 78 IDA 0.01 3.7 RGD PMID:25296178 RGD:10402111 NCBI chr 4:50,143,926...58,080,146 JBrowse link
Q Scl79 Serum cholesterol level QTL 79 IDA 0.001 3.5 RGD PMID:25296178 RGD:10402111
Q Scl80 Serum cholesterol level QTL 80 IDA 0.01 4.7 RGD PMID:25296178 RGD:10402111 NCBI chr11:90,461,781...96,556,255 JBrowse link
blood low density lipoprotein phospholipid level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Spl5 Serum phospholipid level QTL 5 IDA 3.9 RGD PMID:15452030 RGD:1302893 NCBI chr 7:19,654,317...52,888,450 JBrowse link
blood phospholipid level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Spl4 Serum phospholipid level QTL 4 IDA 4.9 RGD PMID:15452030 RGD:1302893 NCBI chr 7:19,654,317...49,753,746 JBrowse link
Q Spl7 Serum phospholipid level QTL 7 IDA 5.5 RGD PMID:15452030 RGD:1302893 NCBI chr17:50,890,908...60,781,592 JBrowse link
blood total cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl11 Serum cholesterol level QTL 11 IDA 4.9 RGD PMID:11414700 RGD:619656 NCBI chr14:17,875,645...36,079,022 JBrowse link
Q Scl30 Serum cholesterol level QTL 30 IDA 3.7 RGD PMID:15452030 RGD:1302893 NCBI chr 7:21,541,977...51,639,954 JBrowse link
Q Scl31 Serum cholesterol level QTL 31 IDA 4.1 RGD PMID:15452030 RGD:1302893 NCBI chr17:38,031,354...83,031,354 JBrowse link
blood triglyceride level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl1 Serum triglyceride level QTL 1 IDA 3.6 RGD PMID:11414700 RGD:619656
Q Stl13 Serum triglyceride level QTL 13 IDA 3.8 RGD PMID:15452030 RGD:1302893 NCBI chr17:21,498,994...50,592,236 JBrowse link
blood very low density lipoprotein cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl68 Serum cholesterol level QTL 68 IDA 3.9 RGD PMID:15452030 RGD:1302893 NCBI chr17:15,781,592...60,781,592 JBrowse link
blood very low density lipoprotein phospholipid level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Spl8 Serum phospholipid level QTL 8 IDA 3.8 RGD PMID:15452030 RGD:1302893 NCBI chr17:1...60,781,592 JBrowse link
calculated plasma low density lipoprotein cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl18 Serum cholesterol level QTL 18 IDA 3.7 RGD PMID:14739155 RGD:737694 NCBI chr 5:84,630,798...129,630,798 JBrowse link
plasma free fatty acids level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Sffal3 Serum free fatty acids level QTL 3 IDA 0.001 6.78 RGD PMID:25003539 RGD:8694157 NCBI chr 2:28,889,991...73,889,991 JBrowse link
Q Sffal4 Serum free fatty acids level QTL 4 IDA 0.05 7.36 RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...32,668,025 JBrowse link
Q Sffal5 Serum free fatty acids level QTL 5 IDA 0.001 8.62 RGD PMID:25003539 RGD:8694157 NCBI chr 7:7,216,097...52,216,097 JBrowse link
Q Sffal6 Serum free fatty acids level QTL 6 IDA 0.001 5.81 RGD PMID:25003539 RGD:8694157
Q Sffal7 Serum free fatty acids level QTL 7 IDA 0.001 4.81 RGD PMID:25003539 RGD:8694157 NCBI chr17:33,104,645...78,104,645 JBrowse link
Q Sffal8 Serum free fatty acids level QTL 8 IDA 0.01 5.32 RGD PMID:25003539 RGD:8694157 NCBI chr20:1...29,193,376 JBrowse link
plasma total cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl14 Serum cholesterol level QTL 14 IDA 4.0E-4 5.8 RGD PMID:14739155 RGD:737694 NCBI chr 5:114,131,300...159,131,300 JBrowse link
Q Scl15 Serum cholesterol level QTL 15 IDA 0.001 4.8 RGD PMID:14739155 RGD:737694 NCBI chr 5:38,011,670...83,011,670 JBrowse link
Q Scl16 Serum cholesterol level QTL 16 IDA 3.8 RGD PMID:14739155 RGD:737694 NCBI chr 8:39,752,803...84,752,803 JBrowse link
Q Scl17 Serum cholesterol level QTL 17 IDA 3.4 RGD PMID:14739155 RGD:737694 NCBI chr 2:214,404,877...251,712,708 JBrowse link
Q Scl19 Serum cholesterol QTL 19 IDA 0.001 4.6 RGD PMID:14709677 RGD:1299960 NCBI chr 1:66,400,974...132,889,942 JBrowse link
Q Scl20 Serum cholesterol level QTL 20 IDA 1.0E-4 6.4 RGD PMID:14709677 RGD:1299960 NCBI chr 5:82,394,392...166,664,054 JBrowse link
Q Scl21 Serum cholesterol level QTL 21 IDA 0.0011 3.8 RGD PMID:14709677 RGD:1299960 NCBI chr12:7,196,730...46,669,029 JBrowse link
Q Scl33 Serum cholesterol QTL 33 IDA 0.0125 2.0 RGD PMID:14709677 RGD:1299960
Q Scl34 Serum cholesterol QTL 34 IDA 0.0033 2.5 RGD PMID:14709677 RGD:1299960 NCBI chr 1:173,363,824...227,535,316 JBrowse link
Q Scl35 Serum cholesterol QTL 35 IDA 0.0073 2.6 RGD PMID:14709677 RGD:1299960 NCBI chr 5:33,311,673...78,311,673 JBrowse link
Q Scl36 Serum cholesterol QTL 36 IDA 0.0125 2.0 RGD PMID:14709677 RGD:1299960 NCBI chr 1:58,769,992...103,769,992 JBrowse link
Q Scl54 Serum cholesterol level QTL 54 IDA 2.93 RGD PMID:17620956 RGD:2290428 NCBI chr 5:36,460,764...136,631,402 JBrowse link
Q Scl55 Serum cholesterol level QTL 55 IDA 2.83 RGD PMID:17620956 RGD:2290428 NCBI chr 2:28,652,666...139,067,443 JBrowse link
Q Scl56 Serum cholesterol level QTL 56 IDA 2.26 RGD PMID:17620956 RGD:2290428 NCBI chr 3:36,101,403...81,101,403 JBrowse link
Q Scl57 Serum cholesterol level QTL 57 IDA 4.15 RGD PMID:17620956 RGD:2290428 NCBI chr 9:44,458,256...121,768,150 JBrowse link
Q Scl58 Serum cholesterol level QTL 58 IDA 3.48 RGD PMID:17620956 RGD:2290428 NCBI chr11:26,318,031...55,806,125 JBrowse link
Q Scl66 Serum cholesterol level QTL 66 IDA 4.1 RGD PMID:19584172 RGD:2316856 NCBI chr 8:39,106,363...114,525,825 JBrowse link
Q Scl67 Serum cholesterol level QTL 67 IDA 1.16E-5 4.27 RGD PMID:11071303 RGD:619669
plasma triglyceride level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl24 Serum triglyceride level QTL 24 IDA 7.1 RGD PMID:19584172 RGD:2316856 NCBI chr 7:49,682,832...115,766,396 JBrowse link
Q Stl25 Serum triglyceride level QTL 25 IDA 0.0073 2.7 RGD PMID:14709677 RGD:1299960
Q Stl26 Serum triglyceride level QTL 26 IDA 0.0035 3.1 RGD PMID:14709677 RGD:1299960 NCBI chr 2:206,613,059...226,891,081 JBrowse link
Q Stl27 Serum triglyceride level QTL 27 IDA 1.0E-4 4.4 RGD PMID:14709677 RGD:1299960 NCBI chr 2:27,148,328...145,807,373 JBrowse link
Q Stl28 Serum triglyceride level QTL 28 IDA 0.0073 2.6 RGD PMID:14709677 RGD:1299960 NCBI chr 5:28,515,489...73,515,489 JBrowse link
Q Stl29 Serum triglyceride level QTL 29 IDA 0.0011 3.3 RGD PMID:14709677 RGD:1299960 NCBI chr13:89,333,129...92,500,981 JBrowse link
Q Stl30 Serum triglyceride level QTL 30 IDA 0.0013 2.6 RGD PMID:14709677 RGD:1299960 NCBI chr16:31,885,271...76,885,271 JBrowse link
Q Stl31 Serum triglyceride level QTL 31 IDA 4.87E-6 4.64 RGD PMID:11071303 RGD:619669 NCBI chr 1:247,133,834...270,518,180 JBrowse link
Q Stl32 Serum triglyceride level QTL 32 IDA 3.0E-4 3.2 RGD PMID:20159938 RGD:7365117
Q Stl4 Serum triglyceride level QTL 4 IDA 1.0E-4 6.5 RGD PMID:12687333 RGD:631174 NCBI chr 4:74,169,813...134,199,155 JBrowse link
Q Stl5 Serum triglyceride level QTL 5 IDA 3.0E-4 4.0 RGD PMID:12687333 RGD:631174 NCBI chr 8:35,464,071...71,842,899 JBrowse link
Q Stl6 Serum triglyceride level QTL 6 IDA 0.0019 4.0 RGD PMID:12687333 RGD:631174 NCBI chr 8:70,041,301...121,080,908 JBrowse link
Q Stl7 Serum triglyceride level QTL 7 IDA 4.64 RGD PMID:14532335 RGD:727992 NCBI chr11:51,071,021...96,071,021 JBrowse link
serum free fatty acids level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Sffal1 Serum free fatty acids level QTL 1 IDA 0.0021 3.4 RGD PMID:15728334 RGD:1580752 NCBI chr 7:116,677,010...124,049,952 JBrowse link
Q Sffal2 Serum free fatty acids level QTL 2 IDA 2.0E-4 4.0 RGD PMID:15728334 RGD:1580752 NCBI chr14:92,553,886...95,876,975 JBrowse link
serum high density lipoprotein cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl12 Serum cholesterol level QTL 12 IDA 0.001 RGD PMID:8698878 RGD:61079 NCBI chr19:30,099,383...47,207,961 JBrowse link
Q Scl27 Serum cholesterol level QTL 27 IDA 3.826 RGD PMID:11721057 RGD:70849 NCBI chr18:54,490,801...86,134,022 JBrowse link
Q Scl28 Serum cholesterol level QTL 28 IDA 3.995 RGD PMID:11721057 RGD:70849 NCBI chr18:1...25,071,266 JBrowse link
Q Scl61 Serum cholesterol level QTL 61 IDA 4.36 RGD PMID:10720472 RGD:619689 NCBI chr17:6,221,998...58,177,198 JBrowse link
serum high density lipoprotein phospholipid level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl13 Serum cholesterol level QTL 13 IDA 3.5E-4 RGD PMID:8698878 RGD:61079
Q Scl23 Serum cholesterol level QTL 23 IDA 5.0E-4 RGD PMID:8698878 RGD:61079 NCBI chr 4:1...28,392,287 JBrowse link
serum phospholipid level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Spl2 Serum phospholipid level QTL 2 IDA 4.1 RGD PMID:12482837 RGD:629577 NCBI chr11:27,556,685...72,556,685 JBrowse link
serum total cholesterol level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl1 Serum cholesterol level QTL 1 IDA 0.001 7.7 RGD PMID:10634822 RGD:61092 NCBI chr15:16,725,528...80,672,115 JBrowse link
Q Scl2 Serum cholesterol level QTL 2 IDA 0.001 7.3 RGD PMID:10634822 RGD:61092 NCBI chr 5:59,793,399...143,070,159 JBrowse link
Q Scl22 Serum cholesterol level QTL 22 IDA 6.2 RGD PMID:9199194 RGD:61055 NCBI chr18:12,216,684...31,644,508 JBrowse link
Q Scl25 Serum cholesterol level QTL 25 IDA 3.013 RGD PMID:11721057 RGD:70849 NCBI chr 1:87,785,026...142,582,336 JBrowse link
Q Scl26 Serum cholesterol level QTL 26 IDA 3.065 RGD PMID:11721057 RGD:70849 NCBI chr 5:48,523,123...91,770,353 JBrowse link
Q Scl29 Serum cholesterol level QTL 29 IDA 3.74 RGD PMID:14724732 RGD:737686
Q Scl3 Serum cholesterol level QTL 3 IDA 3.2 RGD PMID:10634822 RGD:61092 NCBI chr 7:44,867,533...89,867,533 JBrowse link
Q Scl4 Serum cholesterol level QTL 4 IDA 0.008 1.9 RGD PMID:9633608 RGD:619667 NCBI chr 4:96,731,383...141,731,383 JBrowse link
Q Scl44 Serum cholesterol level QTL 44 IDA 6.0 RGD PMID:16061941 RGD:1547851 NCBI chr 5:44,924,861...153,890,773 JBrowse link
Q Scl45 Serum cholesterol level QTL 45 IDA 5.8 RGD PMID:16061941 RGD:1547851 NCBI chr14:65,920,283...99,224,555 JBrowse link
Q Scl46 Serum cholesterol level QTL 46 IDA 3.5 RGD PMID:16061941 RGD:1547851
Q Scl47 Serum cholesterol level QTL 47 IDA 3.6 RGD PMID:16061941 RGD:1547851 NCBI chr10:51,071,897...96,071,897 JBrowse link
Q Scl48 Serum cholesterol level QTL 48 IDA 5.0 RGD PMID:16061941 RGD:1547851 NCBI chr12:15,264,248...52,308,831 JBrowse link
Q Scl5 Serum cholesterol level QTL 5 IDA 2.1 RGD PMID:9633608 RGD:619667
Q Scl59 Serum cholesterol level QTL 59 IDA RGD PMID:18753676 RGD:2300117 NCBI chr14:55,147,478...100,147,478 JBrowse link
Q Scl6 Serum cholesterol level QTL 6 IDA 9.6 RGD PMID:12482837 RGD:629577 NCBI chr 1:81,269,860...99,645,535 JBrowse link
Q Scl60 Serum cholesterol level QTL 60 IDA 3.13 RGD PMID:10720472 RGD:619689
Q Scl62 Serum cholesterol level QTL 62 IDA 0.05 RGD PMID:19584880 RGD:2312642 NCBI chr 3:37,796,919...59,119,581 JBrowse link
Q Scl63 Serum cholesterol level QTL 63 IDA 0.001 RGD PMID:19584880 RGD:2312642
Q Scl64 Serum cholesterol level QTL 64 IDA 0.001 RGD PMID:19584880 RGD:2312642 NCBI chr 5:73,779,642...118,779,642 JBrowse link
Q Scl65 Serum cholesterol level QTL 65 IDA 0.001 RGD PMID:19584880 RGD:2312642
Q Scl7 Serum cholesterol level QTL 7 IDA 4.1 RGD PMID:12482837 RGD:629577 NCBI chr 7:39,845,902...84,845,902 JBrowse link
Q Scl8 Serum cholesterol level QTL8 IDA 4.4 RGD PMID:12482837 RGD:629577
Q Scl9 Serum cholesterol level QTL 9 IDA 3.3 RGD PMID:12482837 RGD:629577 NCBI chr16:15,748,006...25,801,629 JBrowse link
serum triglyceride level term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl10 Serum triglyceride level QTL 10 IDA 3.57 RGD PMID:14724732 RGD:737686 NCBI chr 4:22,288,453...45,429,897 JBrowse link
Q Stl11 Serum triglyceride level QTL 11 IDA 3.42 RGD PMID:14724732 RGD:737686 NCBI chr 7:121,393,075...137,014,596 JBrowse link
Q Stl12 Serum triglyceride level QTL 12 IDA 3.36 RGD PMID:14724732 RGD:737686
Q Stl14 Serum triglyceride level QTL 14 IDA 1.0E-4 3.45 RGD PMID:11374884 RGD:1357168 NCBI chr 7:135,371,291...137,014,596 JBrowse link
Q Stl17 Serum triglyceride level QTL 17 IDA 3.23 RGD PMID:11374884 RGD:1357168 NCBI chr 7:71,621,154...114,982,716 JBrowse link
Q Stl19 Serum triglyceride level QTL 19 IDA 0.002 2.8 RGD PMID:15752738 RGD:1357415 NCBI chr 4:21,925,151...66,925,151 JBrowse link
Q Stl2 Serum triglyceride level QTL 2 IDA 3.3 RGD PMID:9633608 RGD:619667 NCBI chr 4:5,894,575...57,613,242 JBrowse link
Q Stl20 Serum triglyceride level QTL 20 IDA 0.0033 3.2 RGD PMID:15728334 RGD:1580752
Q Stl21 Serum triglyceride level QTL 21 IDA 0.022 3.1 RGD PMID:15728334 RGD:1580752 NCBI chr15:43,677,244...88,677,244 JBrowse link
Q Stl22 Serum triglyceride level QTL 22 IDA 5.15 RGD PMID:10720472 RGD:619689 NCBI chr 4:13,080,146...58,080,146 JBrowse link
Q Stl23 Serum triglyceride level QTL 23 IDA 0.01 RGD PMID:19584880 RGD:2312642 NCBI chr16:839,086...66,195,506 JBrowse link
Q Stl8 Serum triglyceride level QTL 8 IDA 1.0E-4 9.27 RGD PMID:10644432 RGD:70852 NCBI chr 1:234,540,191...270,518,180 JBrowse link
Q Stl9 Serum triglyceride level QTL 9 IDA 1.0E-4 4.71 RGD PMID:10644432 RGD:70852 NCBI chr 8:50,763,951...67,219,641 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    blood measurement 443
      blood chemistry measurement 426
        blood lipid measurement 109
          blood free fatty acids level + 8
          blood lipoprotein measurement + 70
          blood phospholipid level + 7
          blood sterol level + 64
          blood triglyceride level + 30
          plasma lipid level + 19
          serum lipid level + 31
paths to the root