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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:tolonium chloride
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Accession:CHEBI:87647 term browser browse the term
Definition:An organic chloride salt having 3-amino-7-(dimethylamino)-2-methylphenothiazin-5-ium (tolonium) as the counterion. It is a blue nuclear counterstain that can be used to demonstrate Nissl substance and is also useful for staining mast cell granules, both in metachromatic and orthochromatic techniques.
Synonyms:exact_synonym: 3-amino-7-(dimethylamino)-2-methylphenothiazin-5-ium chloride
 related_synonym: 3-Amino-7-(dimethylamino)-2-(methylphenazathionium) chloride;   Blutene chloride;   C.I. 52040;   C.I. 925;   C.I. Basic Blue 17;   Dimethyltoluthionine chloride;   Formula=C15H16ClN3S;   InChI=1S/C15H16N3S.ClH/c1-9-6-13-15(8-11(9)16)19-14-7-10(18(2)3)4-5-12(14)17-13;/h4-8H,16H2,1-3H3;1H/q+1;/p-1;   InChIKey=HNONEKILPDHFOL-UHFFFAOYSA-M;   SMILES=[Cl-].CN(C)c1ccc2nc3cc(C)c(N)cc3[s+]c2c1;   Toluidene Blue O Chloride;   Toluidinblau;   basic blue 17;   chlorure de tolonium;   cloruro de tolonio;   toloni chloridum;   tolonii chloridum;   toluidine blue;   toluidine blue O
 xref: CAS:92-31-9
 xref_mesh: MESH:D014048
 xref: PMID:23884903;   PMID:24981641;   PMID:25463317;   PMID:25670474;   PMID:25752750;   PMID:25910445;   PMID:25972050;   PMID:26055566;   Reaxys:3580048;   Wikipedia:Tolonium_chloride



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tolonium chloride term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase decreases activity ISO Tolonium Chloride results in decreased activity of ACHE protein CTD PMID:33844597 NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
JBrowse link
G App amyloid beta precursor protein decreases secretion ISO Tolonium Chloride results in decreased secretion of APP protein modified form CTD PMID:36027949 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Bace1 beta-secretase 1 multiple interactions ISO Tolonium Chloride results in decreased expression of and results in decreased activity of BACE1 protein CTD PMID:36027949 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Cdk5 cyclin-dependent kinase 5 decreases expression ISO Tolonium Chloride results in decreased expression of CDK5 protein CTD PMID:36027949 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase decreases expression ISO Tolonium Chloride results in decreased expression of FYN protein CTD PMID:36027949 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta decreases expression
increases phosphorylation
ISO Tolonium Chloride results in decreased expression of GSK3B protein
Tolonium Chloride results in increased phosphorylation of GSK3B protein
CTD PMID:36027949 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Mapt microtubule-associated protein tau multiple interactions ISO Tolonium Chloride results in decreased expression of and results in decreased phosphorylation of MAPT protein CTD PMID:36027949 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha decreases phosphorylation ISO Tolonium Chloride results in decreased phosphorylation of PPP2CA protein CTD PMID:36027949 NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
JBrowse link
G Psen1 presenilin 1 decreases expression ISO Tolonium Chloride results in decreased expression of PSEN1 protein modified form CTD PMID:36027949 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19848
    role 19824
      application 19668
        dye 2972
          histological dye 255
            tolonium chloride 9
Path 2
Term Annotations click to browse term
  CHEBI ontology 19848
    subatomic particle 19846
      composite particle 19846
        hadron 19846
          baryon 19846
            nucleon 19846
              atomic nucleus 19846
                atom 19846
                  main group element atom 19796
                    p-block element atom 19796
                      halogen 18678
                        chlorine atom 18462
                          chlorine molecular entity 18462
                            elemental chlorine 8529
                              monoatomic chlorine 8514
                                chloride 8514
                                  chloride salt 8514
                                    organic chloride salt 1096
                                      tolonium chloride 9
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