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ONTOLOGY REPORT - ANNOTATIONS


Term:acridine orange free base
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Accession:CHEBI:87346 term browser browse the term
Definition:A member of the class of aminoacridines that is acridine carrying two dimethylamino substituents at positions 3 and 6. The hydrochloride salt is the fluorescent dye 'acridine orange', used for cell cycle determination.
Synonyms:exact_synonym: N(3),N(3),N(6),N(6)-tetramethylacridine-3,6-diamine
 related_synonym: 3,6-Bis(dimethylamino)acridine;   3,6-Di(dimethylamino)acridine;   Acridine Orange;   Acridine Orange Base;   Brilliant Acridine Orange E;   C.I. 46005B;   C.I. Solvent Orange 15;   Formula=C17H19N3;   InChI=1S/C17H19N3/c1-19(2)14-7-5-12-9-13-6-8-15(20(3)4)11-17(13)18-16(12)10-14/h5-11H,1-4H3;   InChIKey=DPKHZNPWBDQZCN-UHFFFAOYSA-N;   N,N,N',N'-Tetramethyl-3,6-acridinediamine;   SMILES=CN(C)c1ccc2cc3ccc(cc3nc2c1)N(C)C;   Solvent Orange 15
 xref: CAS:494-38-2 "ChemIDplus"
 xref_mesh: MESH:D000165
 xref: PMID:24988915 "Europe PMC";   PMID:25025314 "Europe PMC";   PMID:25542136 "Europe PMC";   PMID:26016416 "Europe PMC";   PMID:26034308 "Europe PMC";   PMID:26163789 "Europe PMC";   Reaxys:20916 "Reaxys";   Wikipedia:Acridine_orange


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acridine orange free base term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:6480464
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464

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Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      application 19235
        dye 1230
          histological dye 102
            acridine orange free base 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            organic molecule 19343
                              organic cyclic compound 19093
                                organic heterocyclic compound 18157
                                  organic heteropolycyclic compound 17423
                                    organic heterotricyclic compound 13723
                                      dibenzopyridine 140
                                        acridines 107
                                          aminoacridines 10
                                            acridine orange free base 3
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