Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:acid green 5
go back to main search page
Accession:CHEBI:87065 term browser browse the term
Definition:An organic sodium salt having 3-[(ethyl{4-[(4-{ethyl[(3-sulfonatophenyl)methyl]amino}phenyl)(4-sulfonatophenyl)methylidene]cyclohexa-2,5-dien-1-ylidene}azaniumyl)methyl]benzene-1-sulfonate as the counterion. It is the standard dye in North American for staining collagen and is also used extensively in plant histology.
Synonyms:exact_synonym: disodium 3-[(ethyl{4-[(4-{ethyl[(3-sulfonatophenyl)methyl]amino}phenyl)(4-sulfonatophenyl)methylidene]cyclohexa-2,5-dien-1-ylidene}azaniumyl)methyl]benzene-1-sulfonate
 related_synonym: A F Green No.2;   Acid Brilliant Green SF;   Acid Green A;   Acid green;   Acidal Light Green SF;   Acilan Green SFG;   Amacid Green G;   C.I. 42095;   C.I. 670;   C.I. Acid Green 5;   C.I. Acid Green 5, disodium salt;   C.I. Food Green 2;   CCRIS 889;   D And C Green No. 4;   D&C Green No. 2;   FD and C Green No. 2;   FD and C Green No. 4;   Fenazo Green 7G;   Food Green 2;   Formula=C37H34N2Na2O9S3;   Green No. 203;   InChI=1S/C37H36N2O9S3.2Na/c1-3-38(25-27-7-5-9-35(23-27)50(43,44)45)32-17-11-29(12-18-32)37(31-15-21-34(22-16-31)49(40,41)42)30-13-19-33(20-14-30)39(4-2)26-28-8-6-10-36(24-28)51(46,47)48;;/h5-24H,3-4,25-26H2,1-2H3,(H2-,40,41,42,43,44,45,46,47,48);;/q;2*+1/p-2;   InChIKey=DGOBMKYRQHEFGQ-UHFFFAOYSA-L;   Leather Green SF;   Lichtgruen;   Light Green 2GN;   Light Green CF;   Light Green FCF Yellowish;   Light Green FS;   Light Green G;   Light Green Lake;   Light Green S;   Light Green SF;   Light Green SFA;   Light Green SFD;   Light Green Yellowish;   Light SF Yellowish (biological stain);   Lissamine Lake Green SF;   Lissamine green SF;   MY/68;   Merantine Green SF;   NSC 9619;   Pencil Green SF;   SMILES=[Na+].[Na+].CCN(Cc1cccc(c1)S([O-])(=O)=O)c1ccc(cc1)C(=C1C=CC(C=C1)=[N+](CC)Cc1cccc(c1)S([O-])(=O)=O)c1ccc(cc1)S([O-])(=O)=O;   Sulfo Green J;   Sumitomo Light Green SF Yellowish;   Wool Brilliant Green SF;   fast acid green N;   light green;   light green SF yellowish
 alt_id: CHEBI:82480
 xref: CAS:5141-20-8;   Reaxys:15416588;   Reaxys:5717828


show annotations for term's descendants           Sort by:
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 5052
    role 5044
      application 863
        dye 3
          histological dye 0
            acid green 5 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 5052
    subatomic particle 5043
      composite particle 5043
        hadron 5071
          baryon 5043
            nucleon 5043
              atomic nucleus 5043
                atom 5043
                  main group element atom 5013
                    p-block element atom 5010
                      chalcogen 4915
                        oxygen atom 4910
                          oxygen molecular entity 4883
                            oxide 71
                              oxoanion 39
                                chalcogen oxoanion 3
                                  sulfur oxoanion 3
                                    sulfonate 0
                                      organosulfonate oxoanion 0
                                        acid green 5(2-) 0
                                          acid green 5 0
paths to the root