Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:KGKGKGKGKGENPAVHFFKNIVTPRTP
go back to main search page
Accession:CHEBI:86313 term browser browse the term
Definition:A linear 27-membered polypeptide comprising the sequence Lys-Gly-Lys-Gly-Lys-Gly-Lys-Gly-Lys-Gly-Glu-Asn-Pro-Ala-Val-His-Phe-Phe-Lys-Asn-Ile-Val-Thr-Pro-Arg-Thr-Pro. Corresponds to the sequence of the myelin basic protein 83-99 (MBP83-99) immunodominant epitope with the valyl residue at position 86 replaced by alanyl [MBP83-99(A(86))] and with an (L-lysylglycyl)5 [(KG5)] linker attached to the glutamine(83) (E(83)) residue.
Synonyms:exact_synonym: L-lysylglycyl-L-lysylglycyl-L-lysylglycyl-L-lysylglycyl-L-lysylglycyl-L-glutaminyl-L-asparaginyl-L-prolyl-L-alanyl-L-valyl-L-histidyl-L-phenylalanyl-L-phenylalanyl-L-lysyl-L-asparaginyl-L-isoleucyl-L-valyl-L-threonyl-L-prolyl-L-arginyl-L-threonyl-L-proline
 related_synonym: Formula=C131H215N41O33;   InChI=1S/C131H215N41O33/c1-10-73(6)106(126(200)166-105(72(4)5)125(199)169-108(76(9)174)128(202)171-57-31-45-94(171)123(197)159-86(43-29-55-145-131(142)143)117(191)168-107(75(8)173)129(203)172-58-32-46-95(172)130(204)205)167-121(195)91(62-97(140)176)162-115(189)85(42-22-28-54-137)158-118(192)88(59-77-33-13-11-14-34-77)160-119(193)89(60-78-35-15-12-16-36-78)161-120(194)90(61-79-64-144-70-151-79)163-124(198)104(71(2)3)165-109(183)74(7)152-122(196)93-44-30-56-170(93)127(201)92(63-98(141)177)164-116(190)87(47-48-96(139)175)157-103(182)69-150-114(188)84(41-21-27-53-136)156-102(181)68-149-113(187)83(40-20-26-52-135)155-101(180)67-148-112(186)82(39-19-25-51-134)154-100(179)66-147-111(185)81(38-18-24-50-133)153-99(178)65-146-110(184)80(138)37-17-23-49-132/h11-16,33-36,64,70-76,80-95,104-108,173-174H,10,17-32,37-63,65-69,132-138H2,1-9H3,(H2,139,175)(H2,140,176)(H2,141,177)(H,144,151)(H,146,184)(H,147,185)(H,148,186)(H,149,187)(H,150,188)(H,152,196)(H,153,178)(H,154,179)(H,155,180)(H,156,181)(H,157,182)(H,158,192)(H,159,197)(H,160,193)(H,161,194)(H,162,189)(H,163,198)(H,164,190)(H,165,183)(H,166,200)(H,167,195)(H,168,191)(H,169,199)(H,204,205)(H4,142,143,145)/t73?,74-,75?,76?,80-,81-,82-,83-,84-,85-,86-,87-,88-,89-,90-,91-,92-,93-,94-,95-,104-,105-,106-,107-,108-/m0/s1;   InChIKey=FVAUQUHQDCNTML-AYTFPTMISA-N;   K G K G K G K G K G E N P A V H F F K N I V T P R T P;   Lys-Gly-Lys-Gly-Lys-Gly-Lys-Gly-Lys-Gly-Glu-Asn-Pro-Ala-Val-His-Phe-Phe-Lys-Asn-Ile-Val-Thr-Pro-Arg-Thr-Pro;   LysGlyLysGlyLysGlyLysGlyLysGlyGluAsnProAlaValHisPhePheLysAsnIleValThrProArgThrPro;   SMILES=CCC(C)[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCCCN)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCC(N)=O)NC(=O)CNC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@@H](N)CCCCN)C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C(C)O)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](C(C)O)C(=O)N1CCC[C@H]1C(O)=O;   [KG]5-ENPAVHFFKNIVTPRTP
 xref: PMID:26082772


show annotations for term's descendants           Sort by:
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19811
    chemical entity 19840
      molecular entity 19809
        polyatomic entity 19767
          macromolecule 8777
            polypeptide 251
              KGKGKGKGKGENPAVHFFKNIVTPRTP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19811
    subatomic particle 19809
      composite particle 19809
        hadron 19840
          baryon 19809
            nucleon 19809
              atomic nucleus 19809
                atom 19809
                  main group element atom 19759
                    p-block element atom 19759
                      carbon group element atom 19708
                        carbon atom 19734
                          organic molecular entity 19705
                            heteroorganic entity 19459
                              organochalcogen compound 19222
                                organooxygen compound 19137
                                  carbon oxoacid 18597
                                    carboxylic acid 18594
                                      carboacyl group 17675
                                        univalent carboacyl group 17675
                                          carbamoyl group 17524
                                            carboxamide 17547
                                              peptide 11120
                                                polypeptide 251
                                                  KGKGKGKGKGENPAVHFFKNIVTPRTP 0
paths to the root