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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:alpha-D-Rhap4NFo-(1->3)-alpha-D-Rhap4NFo-(1->2)-alpha-D-Rhap4NFoO[CH2]5C(O)NH2CH2CH2NH2-3,4-dioxocyclobutylaminomethyl group
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Accession:CHEBI:84680 term browser browse the term
Definition:An organyl group consisting of a trisaccharide of N-formyl-alpha-D-perosamine residues linked sequentially (1->3) and (1->2), and linked at the reducing end glycosidically to a 2-[2-(hexanamido)ethylamino]-3,4-dioxocyclobutylaminomethyl group used as a tether for conjugation to proteins.
Synonyms:exact_synonym: {[2-({2-[(6-{[4,6-dideoxy-4-formamido-alpha-D-mannopyranosyl-(1->3)-4,6-dideoxy-4-formamido-alpha-D-mannopyranosyl-(1->2)-4,6-dideoxy-4-formamido-alpha-D-mannopyranosyl]oxy}hexanoyl)amino]ethyl}amino)-3,4-dioxocyclobutyl]amino}methyl
 related_synonym: 2-({2-[(6-{[N-formyl-alpha-D-perosaminyl-(1->3)-N-formyl-alpha-D-perosaminyl-(1->2)-N-formyl-alpha-D-perosaminyl]oxy}hexanoyl)amino]ethyl}amino)-3,4-dioxocyclobutylaminomethyl;   Formula=C34H55N6O16;   SMILES=C[C@H]1O[C@H](O[C@@H]2[C@H](O)[C@@H](O[C@H]3[C@@H](O)[C@H](NC=O)[C@@H](C)O[C@@H]3OCCCCCC(=O)NCCNC3C(NC-*)C(=O)C3=O)O[C@H](C)[C@H]2NC=O)[C@@H](O)[C@@H](O)[C@@H]1NC=O;   alpha-D-Rha4NFo-(1->3)-alpha-D-Rha4NFo-(1->2)-alpha-D-Rha4NFoO[CH2]5C(O)NH2CH2CH2NH2-3,4-dioxocyclobutylaminomethyl;   {[2-({2-[(6-{[4,6-dideoxy-4-formamido-alpha-D-mannosyl-(1->3)-4,6-dideoxy-4-formamido-alpha-D-mannosyl-(1->2)-4,6-dideoxy-4-formamido-alpha-D-mannosyl]oxy}hexanoyl)amino]ethyl}amino)-3,4-dioxocyclobutyl]amino}methyl
 xref: PMID:25263136


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Path 1
Term Annotations click to browse term
  CHEBI ontology 19786
    chemical entity 19786
      group 19705
        organic group 18631
          organic univalent group 18222
            organyl group 18222
              alpha-D-Rhap4NFo-(1->3)-alpha-D-Rhap4NFo-(1->2)-alpha-D-Rhap4NFoO[CH2]5C(O)NH2CH2CH2NH2-3,4-dioxocyclobutylaminomethyl group 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19786
    subatomic particle 19784
      composite particle 19784
        hadron 19784
          baryon 19784
            nucleon 19784
              atomic nucleus 19784
                atom 19784
                  main group element atom 19675
                    p-block element atom 19675
                      carbon group element atom 19596
                        carbon group molecular entity 19596
                          organic molecular entity 19586
                            organic group 18631
                              organic univalent group 18222
                                organyl group 18222
                                  alpha-D-Rhap4NFo-(1->3)-alpha-D-Rhap4NFo-(1->2)-alpha-D-Rhap4NFoO[CH2]5C(O)NH2CH2CH2NH2-3,4-dioxocyclobutylaminomethyl group 0
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