elemental iron - Ontology Report - Rat Genome Database

aconitase 1

56,425,076

56,481,218

Aco2

aconitase 2

123,102,493

123,145,608

Anxa3

annexin A3

14,371,921

14,426,503

Arhgdia

Rho GDP dissociation inhibitor alpha

109,754,012

109,757,506

Bmp6

bone morphogenetic protein 6

26,955,142

27,112,820

caspase 3

48,845,011

48,863,249

cyclin-dependent kinase inhibitor 1A

6,348,422

6,358,864

Col1a1

collagen type I alpha 1 chain

82,745,801

82,762,790

Dnm1l

dynamin 1-like

88,830,968

88,882,271

Erp29

endoplasmic reticulum protein 29

40,619,377

40,625,884

coagulation factor III, tissue factor

225,310,686

225,322,281

ferritin light chain 1

101,448,190

101,450,034

Gapdh

glyceraldehyde-3-phosphate dehydrogenase

157,676,336

157,680,322

Glo1

glyoxalase 1

9,273,589

9,291,608

Hamp

hepcidin antimicrobial peptide

89,368,021

89,369,960

heme oxygenase 1

14,508,634

14,515,455

Hspa1a

heat shock protein family A (Hsp70) member 1A

4,875,834

4,881,751

Hspa1l

heat shock protein family A (Hsp70) member 1 like

4,879,998

4,965,191

Hspa9

heat shock protein family A (Hsp70) member 9

27,731,072

27,749,235

Hspd1

heat shock protein family D (Hsp60) member 1

61,680,529

61,691,202

Ireb2

iron responsive element binding protein 2

59,450,974

59,503,634

Lcn2

lipocalin 2

11,414,189

11,417,534

Mapk1

mitogen activated protein kinase 1

88,203,863

88,273,301

Mapk14

mitogen activated protein kinase 14

5,933,290

5,995,137

Mapk3

mitogen activated protein kinase 3

198,192,773

198,198,975

Mrps9

mitochondrial ribosomal protein S9

49,647,257

49,704,828

metallothionein 2A

11,307,966

11,308,740

P4ha1

prolyl 4-hydroxylase subunit alpha 1

28,920,616

28,972,576

Pdhb

pyruvate dehydrogenase E1 subunit beta

18,540,826

18,546,855

Pgk1

phosphoglycerate kinase 1

77,263,399

77,279,373

Pmp22

peripheral myelin protein 22

49,538,588

49,568,583

Ppia

peptidylprolyl isomerase A

86,673,775

86,677,443

Rack1

receptor for activated C kinase 1

34,149,717

34,155,198

Slc11a1

solute carrier family 11 member 1

81,655,590

81,666,697

solute carrier family 11 member 2

142,025,812

142,062,892

solute carrier family 40 member 1

52,819,451

52,830,461

transferrin

111,694,570

111,721,275

Tfr2

transferrin receptor 2

22,177,382

22,194,330

transferrin receptor

71,397,423

71,419,263

Tpd52l1

TPD52 like 1

28,454,949

28,578,736

Vdac2

voltage-dependent anion channel 2

2,634,622

2,648,548

iron(0)

Symbol

Object Name

JBrowse

Chr

Start

Stop

Reference

Abcc1

ATP binding cassette subfamily C member 1

549,537

672,235

Abcg2

ATP binding cassette subfamily G member 2

88,765,441

88,890,268

Acbd3

acyl-CoA binding domain containing 3

99,004,942

99,035,520

aconitase 1

56,425,076

56,481,218

Aco2

aconitase 2

123,102,493

123,145,608

Acsf2

acyl-CoA synthetase family member 2

82,284,719

82,326,771

Acsl1

acyl-CoA synthetase long-chain family member 1

48,937,456

49,003,898

Acsl3

acyl-CoA synthetase long-chain family member 3

84,569,601

84,593,565

Adgrg1

adhesion G protein-coupled receptor G1

10,423,534

10,460,674

Ahsp

alpha hemoglobin stabilizing protein

199,720,038

199,721,010

Akap13

A-kinase anchoring protein 13

137,089,558

137,315,272

Akt1

AKT serine/threonine kinase 1

137,218,398

137,239,970

Alas2

5'-aminolevulinate synthase 2

23,167,576

23,187,356

Alb

albumin

19,176,275

19,191,793

Aldoc

aldolase, fructose-bisphosphate C

65,586,504

65,590,093

Ankrd22

ankyrin repeat domain 22

252,430,750

252,461,346

Ankrd37

ankyrin repeat domain 37

49,463,016

49,465,905

Anxa1

annexin A1

237,893,983

237,910,002

Anxa2

annexin A2

75,687,134

75,723,589

Ap1s3

adaptor related protein complex 1 subunit sigma 3

85,386,752

85,445,977

Ap2a1

adaptor related protein complex 2 subunit alpha 1

100,896,582

100,926,443

Apoe

apolipoprotein E

80,612,894

80,616,820

Apoh

apolipoprotein H

96,640,013

96,653,939

App

amyloid beta precursor protein

24,425,013

24,641,872

Aqp4

aquaporin 4

6,766,009

6,782,757

Arid3b

AT-rich interaction domain 3B

62,569,601

62,616,837

Arnt

aryl hydrocarbon receptor nuclear translocator

196,594,178

196,651,486

Arrdc3

arrestin domain containing 3

8,732,907

8,745,445

Atm

ATM serine/threonine kinase

58,015,938

58,119,973

Atp7a

ATPase copper transporting alpha

77,076,085

77,193,644

Atp7b

ATPase copper transporting beta

74,865,516

74,944,935

B2m

beta-2 microglobulin

114,087,287

114,093,311

Bad

BCL2-associated agonist of cell death

222,198,516

222,207,459

BCL2 associated X, apoptosis regulator

101,451,801

101,457,207

Bcl2

BCL2, apoptosis regulator

26,605,426

26,769,374

Bcl2l1

Bcl2-like 1

148,259,594

148,314,191

Bcl3

BCL3, transcription coactivator

80,730,758

80,745,273

Bmp6

bone morphogenetic protein 6

26,955,142

27,112,820

Bnip3

BCL2 interacting protein 3

211,248,098

211,265,282

Calr

calreticulin

25,956,771

25,961,666

caspase 3

48,845,011

48,863,249

Cat

catalase

93,379,872

93,412,058

Cav1

caveolin 1

44,597,123

44,630,206

Ccl2

C-C motif chemokine ligand 2

69,412,065

69,413,863

Ccl3

C-C motif chemokine ligand 3

70,869,516

70,871,066

Ccl5

C-C motif chemokine ligand 5

70,739,764

70,744,303

Ccnd1

cyclin D1

218,090,750

218,100,447

Ccng2

cyclin G2

16,267,572

16,276,068

Ccpg1

cell cycle progression 1

79,660,634

79,692,044

Ccsap

centriole, cilia and spindle-associated protein

56,615,326

56,634,031

Cd109

CD109 molecule

85,951,420

86,065,411

Cd14

CD14 molecule

29,560,341

29,562,290

Cd1d1

CD1d1 molecule

186,330,298

186,333,805

Cd300a

Cd300a molecule

103,437,978

103,451,170

Cd36

CD36 molecule

14,150,309

14,191,498

Cd70

Cd70 molecule

9,842,585

9,845,728

Cd74

CD74 molecule

56,071,420

56,080,851

Cdipt

CDP-diacylglycerol--inositol 3-phosphatidyltransferase

198,409,186

198,413,497

cyclin-dependent kinase inhibitor 1A

6,348,422

6,358,864

Cdkn1c

cyclin-dependent kinase inhibitor 1C

216,661,067

216,663,791

Cdo1

cysteine dioxygenase type 1

40,702,027

40,716,901

Cdrt4

CMT1A duplicated region transcript 4

49,368,183

49,400,284

Cds1

CDP-diacylglycerol synthase 1

9,396,511

9,456,964

Cel

carboxyl ester lipase

7,134,021

7,141,522

Chek2

checkpoint kinase 2

51,845,574

51,878,098

Chi3l1

chitinase 3 like 1

51,022,844

51,030,797

Chrnd

cholinergic receptor nicotinic delta subunit

94,286,550

94,294,968

Chuk

component of inhibitor of nuclear factor kappa B kinase complex

263,848,829

263,884,354

Cldn2

claudin 2

111,122,552

111,133,188

Clps

colipase

5,803,447

5,806,107

Cnn3

calponin 3

225,005,069

225,036,179

Col1a1

collagen type I alpha 1 chain

82,745,801

82,762,790

ceruloplasmin

104,744,249

104,803,034

Csf2

colony stimulating factor 2

39,602,089

39,604,070

Cstf2t

cleavage stimulation factor subunit 2, tau variant

249,574,954

249,578,520

Ctnnbip1

catenin, beta-interacting protein 1

166,464,170

166,513,030

Cxcl1

C-X-C motif chemokine ligand 1

18,743,678

18,745,457

Cxcl2

C-X-C motif chemokine ligand 2

18,731,346

18,733,391

Cybrd1

cytochrome b reductase 1

57,718,496

57,745,749

Cyp2b15

cytochrome P450, family 2, subfamily b, polypeptide 15

251,325,923

251,338,404

Cytip

cytohesin 1 interacting protein

44,150,494

44,225,723

Dapl1

death associated protein-like 1

45,538,408

45,559,281

Daxx

death-domain associated protein

5,480,103

5,485,962

Ddit3

DNA-damage inducible transcript 3

70,578,564

70,585,074

Defa5

defensin alpha 5

75,338,050

75,340,401

Dgka

diacylglycerol kinase, alpha

3,143,826

3,170,764

Dlc1

DLC1 Rho GTPase activating protein

58,776,489

59,247,752

Dock10

dedicator of cytokinesis 10

9
9

86,424,638
86,312,470

86,571,854
86,423,054

Drd1

dopamine receptor D1

11,099,736

11,104,352

Drd2

dopamine receptor D2

53,678,777

53,743,643

E2f1

E2F transcription factor 1

150,062,895

150,073,721

E2f8

E2F transcription factor 8

104,185,436

104,203,683

Edn1

endothelin 1

22,136,814

22,143,745

Eef2k

eukaryotic elongation factor-2 kinase

190,780,211

190,839,926

Egln1

egl-9 family hypoxia-inducible factor 1

57,660,194

57,701,158

Egln3

egl-9 family hypoxia-inducible factor 3

75,050,329

75,075,795

Egr1

early growth response 1

27,657,903

27,660,101

Elane

elastase, neutrophil expressed

12,638,320

12,640,168

Emp1

epithelial membrane protein 1

169,161,076

169,181,967

Epas1

endothelial PAS domain protein 1

10,306,508

10,385,239

Epo

erythropoietin

22,274,828

22,278,268

Exoc6

exocyst complex component 6

256,211,879

256,369,318

F13a1

coagulation factor XIII A1 chain

28,504,650

28,680,015

coagulation factor II

80,529,468

80,542,993

Fabp2

fatty acid binding protein 2

227,080,912

227,083,654

Fabp6

fatty acid binding protein 6

29,191,621

29,196,593

Fam117b

family with sequence similarity 117, member B

66,716,969

66,784,487

Fam20c

FAM20C, golgi associated secretory pathway kinase

17,913,771

17,972,733

Fbxw5

F-box and WD repeat domain containing 5

2,726,705

2,731,213

Fech

ferrochelatase

59,941,992

59,975,192

Fen1

flap structure-specific endonuclease 1

226,251,516

226,256,160

Flot1

flotillin 1

3,427,890

3,438,418

Fn3k

fructosamine 3 kinase

110,626,462

110,642,262

Fntb

farnesyltransferase, CAAX box, beta

99,883,959

99,966,988

Fos

Fos proto-oncogene, AP-1 transcription factor subunit

109,300,433

109,303,299

Fth1

ferritin heavy chain 1

226,030,940

226,033,228

ferritin light chain 1

101,448,190

101,450,034

Ftmt

ferritin mitochondrial

47,294,292

47,295,541

Fxn

frataxin

242,123,975

242,152,834

G6pc

glucose-6-phosphatase, catalytic subunit

89,286,009

89,296,213

Gabbr2

gamma-aminobutyric acid type B receptor subunit 2

62,276,100

62,621,737

Gabra1

gamma-aminobutyric acid type A receptor subunit alpha 1

27,310,718

27,371,802

Gar1

GAR1 ribonucleoprotein

235,250,453

235,258,464

Gas1

growth arrest-specific 1

4,846,116

4,849,350

Gas7

growth arrest specific 7

54,010,723

54,240,805

Gclc

glutamate-cysteine ligase, catalytic subunit

85,059,051

85,097,471

Gclm

glutamate cysteine ligase, modifier subunit

225,827,504

225,847,876

Gkn1

gastrokine 1

119,143,070

119,148,358

Gkn2

gastrokine 2

119,131,255

119,177,329

Got1

glutamic-oxaloacetic transaminase 1

263,246,248

263,269,762

Gpam

glycerol-3-phosphate acyltransferase, mitochondrial

275,843,823

275,906,880

Gpr34

G protein-coupled receptor 34

10,022,986

10,043,504

Gprc5a

G protein-coupled receptor, class C, group 5, member A

168,832,937

168,851,650

Gpt

glutamic--pyruvic transaminase

117,759,083

117,761,932

Gpx1

glutathione peroxidase 1

117,117,430

117,118,528

Gpx2

glutathione peroxidase 2

99,839,960

99,843,245

Gsk3b

glycogen synthase kinase 3 beta

65,060,884

65,208,842

Gsr

glutathione-disulfide reductase

62,197,617

62,239,987

Gss

glutathione synthetase

151,076,254

151,106,557

Gsta2

glutathione S-transferase alpha 2

85,640,081

85,645,621

Gsta4

glutathione S-transferase alpha 4

85,497,557

85,514,732

Gsta5

glutathione S-transferase alpha 5

85,553,659

85,564,914

Gsta6

glutathione S-transferase alpha 6

27,475,273

27,533,939

Gstm1

glutathione S-transferase mu 1

210,803,869

210,809,461

Gstm5

glutathione S-transferase, mu 5

210,685,338

210,688,133

H3f4

H3.4 histone

45,304,696

45,305,106

Hamp

hepcidin antimicrobial peptide

89,368,021

89,369,960

Hba-a2

hemoglobin alpha, adult chain 2

15,589,364

15,590,207

Hbb

hemoglobin subunit beta

168,971,269

168,972,680

Hdac8

histone deacetylase 8

72,163,777

72,370,058

Heph

hephaestin

65,377,313

65,658,479

Hfe

homeostatic iron regulator

43,661,276

43,669,327

hypoxia inducible factor 1 subunit alpha

96,810,868

96,856,303

Hjv

hemojuvelin BMP co-receptor

198,655,437

198,659,318

Hmgcs2

3-hydroxy-3-methylglutaryl-CoA synthase 2

200,452,623

200,480,785

heme oxygenase 1

14,508,634

14,515,455

Hpgds

hematopoietic prostaglandin D synthase

95,945,356

95,970,666

Hras

HRas proto-oncogene, GTPase

214,178,404

214,181,841

Hsbp1l1

heat shock factor binding protein 1-like 1

76,748,067

76,754,642

Hspa1a

heat shock protein family A (Hsp70) member 1A

4,875,834

4,881,751

Hspa1l

heat shock protein family A (Hsp70) member 1 like

4,879,998

4,965,191

Hspa8

heat shock protein family A (Hsp70) member 8

44,989,401

44,993,261

Hspa9

heat shock protein family A (Hsp70) member 9

27,731,072

27,749,235

Hspb1

heat shock protein family B (small) member 1

23,839,390

23,841,051

Hsph1

heat shock protein family H (Hsp110) member 1

6,322,685

6,341,898

Htt

huntingtin

81,105,139

81,254,637

Icam1

intercellular adhesion molecule 1

22,035,287

22,047,049

Idi1

isopentenyl-diphosphate delta isomerase 1

57,976,266

57,984,036

Ifng

interferon gamma

61,337,383

61,341,419

Ift172

intraflagellar transport 172

26,390,686

26,485,459

Igf1

insulin-like growth factor 1

28,412,123

28,491,815

Igfbp3

insulin-like growth factor binding protein 3

87,457,647

87,465,374

Ikbkb

inhibitor of nuclear factor kappa B kinase subunit beta

74,177,233

74,230,809

Il12a

interleukin 12A

165,076,945

165,083,996

Il12b

interleukin 12B

30,034,447

30,048,774

Il18

interleukin 18

55,009,666

55,016,286

Il1a

interleukin 1 alpha

121,824,712

121,836,122

Il1b

interleukin 1 beta

121,876,256

121,882,637

Il6

interleukin 6

3,043,231

3,047,807

Iqcd

IQ motif containing D

41,490,451

41,507,416

Ireb2

iron responsive element binding protein 2

59,450,974

59,503,634

Irf8

interferon regulatory factor 8

54,314,859

54,336,643

Itga6

integrin subunit alpha 6

58,442,904

58,515,124

Itgam

integrin subunit alpha M

199,495,312

199,545,738

Itgb2

integrin subunit beta 2

11,777,773

11,815,647

Itln1

intelectin 1

89,919,570

89,929,774

Jazf1

JAZF zinc finger 1

82,834,181

83,141,430

Jchain

joining chain of multimeric IgA and IgM

21,176,841

21,183,731

Jun

Jun proto-oncogene, AP-1 transcription factor subunit

114,011,184

114,014,277

Kcne3

potassium voltage-gated channel subfamily E regulatory subunit 3

165,189,934

165,196,949

Kdm3a

lysine demethylase 3A

99,503,160

99,547,315

Kit

KIT proto-oncogene receptor tyrosine kinase

35,072,131

35,149,638

Klhdc7b

kelch domain containing 7B

130,357,589

130,359,529

Lamc2

laminin subunit gamma 2

70,566,643

70,632,126

Lamp5

lysosomal-associated membrane protein family, member 5

129,012,677

129,031,522

Lcn2

lipocalin 2

11,414,189

11,417,534

Lig3

DNA ligase 3

70,134,734

70,158,051

Lox

lysyl oxidase

47,500,320

47,577,819

Lpar1

lysophosphatidic acid receptor 1

75,557,038

75,678,067

Lrrc25

leucine rich repeat containing 25

20,556,973

20,563,773

Lta

lymphotoxin alpha

4,851,889

4,854,677

Ly75

lymphocyte antigen 75

46,369,749

46,457,182

Lypla1

lysophospholipase 1

14,559,333

14,588,447

Maoa

monoamine oxidase A

6,554,698

6,620,722

Map1lc3b

microtubule-associated protein 1 light chain 3 beta

53,635,449

53,643,970

Map2k6

mitogen-activated protein kinase kinase 6

98,707,160

98,823,054

Map3k14

mitogen-activated protein kinase kinase kinase 14

91,303,428

91,353,601

Map3k7

mitogen activated protein kinase kinase kinase 7

47,183,142

47,244,424

Mapk1

mitogen activated protein kinase 1

88,203,863

88,273,301

Mapk3

mitogen activated protein kinase 3

198,192,773

198,198,975

Marcks

myristoylated alanine rich protein kinase C substrate

42,966,140

42,971,838

Mcemp1

mast cell-expressed membrane protein 1

2,211,970

2,217,005

Mcoln1

mucolipin 1

2,054,629

2,068,682

Mctp1

multiple C2 and transmembrane domain containing 1

3,400,883

4,089,949

Me1

malic enzyme 1

94,256,830

94,368,834

Mif

macrophage migration inhibitory factor

13,715,219

13,732,980

Miox

myo-inositol oxygenase

130,308,707

130,311,205

Mmp1

matrix metallopeptidase 1

5,703,206

5,723,593

Mpo

myeloperoxidase

75,087,892

75,098,260

Ms4a6a

membrane spanning 4-domains A6A

227,919,284

227,932,637

Ms4a7

membrane spanning 4-domains A7

227,490,777

227,506,819

Mt1

metallothionein 1

11,301,991

11,303,007

metallothionein 2A

11,307,966

11,308,740

Mvd

mevalonate diphosphate decarboxylase

55,258,910

55,268,933

Myc

MYC proto-oncogene, bHLH transcription factor

102,586,313

102,591,240

Ndrg1

N-myc downstream regulated 1

107,734,326

107,775,701

Ndufs1

NADH:ubiquinone oxidoreductase core subunit S1

69,919,863

69,953,182

Nedd9

neural precursor cell expressed, developmentally down-regulated 9

22,984,792

23,179,701

Neil1

nei-like DNA glycosylase 1

61,817,258

61,824,023

Neil2

nei-like DNA glycosylase 2

46,371,780

46,382,730

nuclear factor, erythroid 2-like 2

62,497,568

62,525,146

Nfil3

nuclear factor, interleukin 3 regulated

12,261,102

12,276,316

Nfkbia

NFKB inhibitor alpha

76,267,227

76,270,457

Ngb

neuroglobin

111,126,259

111,131,699

Nlrc4

NLR family, CARD domain containing 4

22,167,874

22,194,755

Nmt2

N-myristoyltransferase 2

78,919,235

78,966,013

Nos2

nitric oxide synthase 2

66,188,290

66,221,621

Npc1

NPC intracellular cholesterol transporter 1

3,616,878

3,662,656

NAD(P)H quinone dehydrogenase 1

38,422,210

38,437,103

Ocln

occludin

30,527,327

30,577,218

Odc1

ornithine decarboxylase 1

42,852,529

42,859,142

Opn3

opsin 3

93,716,481

93,746,994

Osbpl11

oxysterol binding protein-like 11

70,770,509

70,855,425

P2rx7

purinergic receptor P2X 7

39,353,613

39,396,042

P4ha1

prolyl 4-hydroxylase subunit alpha 1

28,920,616

28,972,576

P4htm

prolyl 4-hydroxylase, transmembrane

117,364,895

117,383,275

Parp1

poly (ADP-ribose) polymerase 1

98,857,255

98,889,444

Pcgf5

polycomb group ring finger 5

254,974,688

255,090,925

Pck1

phosphoenolpyruvate carboxykinase 1

171,213,936

171,219,885

Pcna

proliferating cell nuclear antigen

124,880,698

124,884,570

Pctp

phosphatidylcholine transfer protein

77,491,445

77,537,268

Pdgfa

platelet derived growth factor subunit A

17,734,141

17,756,186

Pdk4

pyruvate dehydrogenase kinase 4

30,546,772

30,556,774

Pfkfb4

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4

117,733,347

117,776,525

Phospho1

phosphoethanolamine/phosphocholine phosphatase 1

83,635,557

83,643,862

Pik3c2b

phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta

49,848,939

49,909,404

Pik3r1

phosphoinositide-3-kinase regulatory subunit 1

31,742,326

31,826,882

Pim1

Pim-1 proto-oncogene, serine/threonine kinase

8,165,423

8,169,557

Pip5k1b

phosphatidylinositol-4-phosphate 5-kinase type 1 beta

242,168,462

242,441,247

Pla2g1b

phospholipase A2 group IB

46,879,346

46,890,234

Pla2g4a

phospholipase A2 group IVA

67,062,252

67,206,688

Plaa

phospholipase A2, activating protein

113,548,913

113,578,928

Pld4

phospholipase D family, member 4

137,323,713

137,331,231

Plpp1

phospholipid phosphatase 1

44,664,076

44,726,820

Plscr1

phospholipid scramblase 1

99,625,523

99,645,882

Pmp22

peripheral myelin protein 22

49,538,588

49,568,583

Pmvk

phosphomevalonate kinase

188,784,329

188,793,890

Pnlip

pancreatic lipase

279,798,187

279,811,372

Pnliprp1

pancreatic lipase-related protein 1

279,867,034

279,882,663

Pnliprp2

pancreatic lipase related protein 2

279,896,973

279,927,600

Poglut2

protein O-glucosyltransferase 2

50,872,492

50,884,596

Polb

DNA polymerase beta

74,237,001

74,260,272

Polr3e

RNA polymerase III subunit E

190,852,954

190,881,539

Pon1

paraoxonase 1

30,249,749

30,276,297

Por

cytochrome p450 oxidoreductase

23,998,411

24,017,063

Pparg

peroxisome proliferator-activated receptor gamma

147,274,055

147,399,383

Ppp1r16b

protein phosphatase 1, regulatory subunit 16B

155,160,474

155,267,002

Ppp1r1b

protein phosphatase 1, regulatory (inhibitor) subunit 1B

86,303,727

86,312,770

Prg3

proteoglycan 3, pro eosinophil major basic protein 2

72,395,194

72,401,254

Prkaa1

protein kinase AMP-activated catalytic subunit alpha 1

54,857,688

54,893,404

Prnp

prion protein

124,515,917

124,531,320

Prtn3

proteinase 3

12,643,712

12,646,951

prostaglandin-endoperoxide synthase 2

67,351,230

67,356,920

Ptx3

pentraxin 3

158,097,843

158,103,653

Rab30

RAB30, member RAS oncogene family

157,573,344

157,667,973

Rasd1

ras related dexamethasone induced 1

46,330,361

46,339,326

Rbp7

retinol binding protein 7

166,278,214

166,282,832

Relb

RELB proto-oncogene, NF-kB subunit

80,517,081

80,545,019

Retn

resistin

2,201,909

2,203,649

RGD1565785

similar to chromosome X open reading frame 21

54,390,733

54,409,466

Rgs1

regulator of G-protein signaling 1

61,066,196

61,070,772

Rgs2

regulator of G-protein signaling 2

60,846,458

60,849,061

Rhob

ras homolog family member B

33,689,127

33,691,301

Rnase4

ribonuclease A family member 4

28,018,040

28,035,395

Ropn1l

rhophilin associated tail protein 1-like

84,520,421

84,531,192

Rrm2

ribonucleotide reductase regulatory subunit M2

43,884,627

43,890,818

RT1-Bb

RT1 class II, locus Bb

4,043,726

4,049,367

RT1-Db1

RT1 class II, locus Db1

4,087,621

4,097,190

S100a9

S100 calcium binding protein A9

190,097,436

190,100,209

Scd2

stearoyl-Coenzyme A desaturase 2

264,059,374

264,072,433

Scp2

sterol carrier protein 2

127,647,934

127,735,703

Sele

selectin E

82,355,234

82,365,323

Serpinb8

serpin family B member 8

27,876,662

27,914,038

Sesn3

sestrin 3

12,823,060

12,878,749

Ska1

spindle and kinetochore associated complex subunit 1

70,174,316

70,184,368

Slc11a1

solute carrier family 11 member 1

81,655,590

81,666,697

solute carrier family 11 member 2

142,025,812

142,062,892

Slc12a2

solute carrier family 12 member 2

52,917,124

52,985,281

Slc23a2

solute carrier family 23 member 2

124,632,491

124,842,225

Slc26a11

solute carrier family 26 member 11

108,479,105

108,504,188

Slc2a5

solute carrier family 2 member 5

167,142,182

167,174,203

Slc34a2

solute carrier family 34 member 2

60,257,211

60,276,516

Slc39a14

solute carrier family 39 member 14

51,982,872

52,029,841

Slc39a8

solute carrier family 39 member 8

241,028,851

241,092,584

solute carrier family 40 member 1

52,819,451

52,830,461

Slc6a1

solute carrier family 6 member 1

146,258,842

146,292,176

Slc6a3

solute carrier family 6 member 3

32,323,011

32,363,983

Slpi

secretory leukocyte peptidase inhibitor

160,799,979

160,802,228

Smim3

small integral membrane protein 3

55,744,809

55,797,186

Snapc1

small nuclear RNA activating complex, polypeptide 1

96,871,675

96,893,422

Snca

synuclein alpha

90,782,412

90,883,236

Sod1

superoxide dismutase 1

30,363,282

30,368,858

Sod2

superoxide dismutase 2

47,914,757

47,921,587

Sord

sorbitol dehydrogenase

114,176,127

114,207,368

Sort1

sortilin 1

211,078,092

211,156,312

Sox9

SRY-box transcription factor 9

101,288,528

101,294,030

Sp1

Sp1 transcription factor

144,014,173

144,044,635

Sp6

Sp6 transcription factor

84,950,751

84,961,368

Spr

sepiapterin reductase

116,912,343

116,916,073

Sqstm1

sequestosome 1

35,704,728

35,716,316

Src

SRC proto-oncogene, non-receptor tyrosine kinase

153,547,807

153,595,643

Steap2

STEAP2 metalloreductase

25,506,604

25,527,088

Steap3

STEAP3 metalloreductase

36,257,220

36,274,144

Steap4

STEAP4 metalloreductase

23,112,682

23,135,354

Stk11

serine/threonine kinase 11

12,440,751

12,457,513

Sulf2

sulfatase 2

162,791,349

162,872,984

Tert

telomerase reverse transcriptase

32,250,876

32,275,330

Tes

testin LIM domain protein

44,321,883

44,360,407

transferrin

111,694,570

111,721,275

Tff1

trefoil factor 1

9,892,124

9,895,984

Tfr2

transferrin receptor 2

22,177,382

22,194,330

transferrin receptor

71,397,423

71,419,263

Tgfb1

transforming growth factor, beta 1

82,480,875

82,497,196

Tgif1

TGFB-induced factor homeobox 1

119,181,079

119,190,698

Tmem154

transmembrane protein 154

183,674,361

183,714,232

Tmem252

transmembrane protein 252

242,572,558

242,577,817

Tmem45b

transmembrane protein 45b

32,563,872

32,609,212

Tmem86a

transmembrane protein 86A

103,173,032

103,177,382

Tmprss6

transmembrane serine protease 6

119,659,323

119,689,953

tumor necrosis factor

5,189,382

5,192,000

Tnfsf10

TNF superfamily member 10

113,008,008

113,026,899

Tppp3

tubulin polymerization-promoting protein family member 3

37,424,323

37,428,075

Treml2

triggering receptor expressed on myeloid cells-like 2

14,659,967

14,668,313

Trim27

tripartite motif-containing 27

45,613,863

45,626,212

Trpc6

transient receptor potential cation channel, subfamily C, member 6

6,811,543

6,917,534

Tshz1

teashirt zinc finger homeobox 1

80,860,995

80,907,744

Tshz3

teashirt zinc finger homeobox 3

92,703,180

92,775,020

Txn2

thioredoxin 2

119,144,350

119,158,173

Ube2e1

ubiquitin-conjugating enzyme E2E 1

8,124,869

8,178,252

Ugt1a6

UDP glucuronosyltransferase family 1 member A6

95,241,609

95,302,822

Ugt2b17

UDP glucuronosyltransferase family 2 member B17

22,724,399

22,736,148

Ugt2b35

UDP glucuronosyltransferase 2 family, polypeptide B35

22,553,633

22,591,461

Urod

uroporphyrinogen decarboxylase

135,855,429

135,859,515

Vcam1

vascular cell adhesion molecule 1

219,071,193

219,090,931

Vdr

vitamin D receptor

139,344,452

139,394,138

Vsig10l

V-set and immunoglobulin domain containing 10 like

98,458,691

98,467,444

Wipi1

WD repeat domain, phosphoinositide interacting 1

97,859,730

97,896,949

Zfp503

zinc finger protein 503

2,374,582

2,378,370

iron(2+) sulfate (anhydrous)

Symbol

Object Name

JBrowse

Chr

Start

Stop

Reference

Abcf1

ATP binding cassette subfamily F member 1

3,309,914

3,322,828

aconitase 1

56,425,076

56,481,218

Acta2

actin alpha 2, smooth muscle

252,537,614

252,550,394

Akt1

AKT serine/threonine kinase 1

137,218,398

137,239,970

Atp2a1

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1

197,855,912

197,875,038

BCL2 associated X, apoptosis regulator

101,451,801

101,457,207

Bcl2

BCL2, apoptosis regulator

26,605,426

26,769,374

Bcl2a1

BCL2-related protein A1

96,551,424

96,559,527

caspase 3

48,845,011

48,863,249

Casp7

caspase 7

277,190,557

277,242,779

Cat

catalase

93,379,872

93,412,058

Cav1

caveolin 1

44,597,123

44,630,206

Ccl17

C-C motif chemokine ligand 17

10,619,220

10,620,671

Ccl19

C-C motif chemokine ligand 19

58,181,025

58,182,969

Ccl20

C-C motif chemokine ligand 20

88,918,359

88,921,017

Ccl21

C-C motif chemokine ligand 21

58,197,678

58,198,782

Ccl24

C-C motif chemokine ligand 24

24,131,529

24,152,626

Ccr6

C-C motif chemokine receptor 6

53,063,380

53,087,519

Ccr7

C-C motif chemokine receptor 7

87,057,335

87,067,444

Ccr8

C-C motif chemokine receptor 8

128,779,552

128,782,531

Cd44

CD44 molecule (Indian blood group)

92,695,083

92,783,820

cyclin-dependent kinase inhibitor 1A

6,348,422

6,358,864

Cebpb

CCAAT/enhancer binding protein beta

164,424,502

164,425,933

Chuk

component of inhibitor of nuclear factor kappa B kinase complex

263,848,829

263,884,354

Crp

C-reactive protein

91,080,448

91,081,358

Csf2

colony stimulating factor 2

39,602,089

39,604,070

Cxcl10

C-X-C motif chemokine ligand 10

17,210,733

17,212,930

Cxcl11

C-X-C motif chemokine ligand 11

17,195,395

17,198,170

Cxcl13

C-X-C motif chemokine ligand 13

15,253,146

15,258,221

Cxcl14

C-X-C motif chemokine ligand 14

9,109,731

9,117,754

Cxcl2

C-X-C motif chemokine ligand 2

18,731,346

18,733,391

Cxcr2

C-X-C motif chemokine receptor 2

81,427,275

81,435,065

Cyp1a1

cytochrome P450, family 1, subfamily a, polypeptide 1

62,472,087

62,478,122

Dnajb1

DnaJ heat shock protein family (Hsp40) member B1

24,747,178

24,750,919

Egln1

egl-9 family hypoxia-inducible factor 1

57,660,194

57,701,158

Egr1

early growth response 1

27,657,903

27,660,101

Epas1

endothelial PAS domain protein 1

10,306,508

10,385,239

Erbb2

erb-b2 receptor tyrosine kinase 2

86,367,596

86,391,728

F10

coagulation factor X

81,803,169

81,822,476

coagulation factor II

80,529,468

80,542,993

ferritin light chain 1

101,448,190

101,450,034

Gclc

glutamate-cysteine ligase, catalytic subunit

85,059,051

85,097,471

Gdnf

glial cell derived neurotrophic factor

56,884,181

56,912,964

Gpx1

glutathione peroxidase 1

117,117,430

117,118,528

Gsk3b

glycogen synthase kinase 3 beta

65,060,884

65,208,842

H2ax

H2A.X variant histone

48,665,652

48,666,981

hypoxia inducible factor 1 subunit alpha

96,810,868

96,856,303

heme oxygenase 1

14,508,634

14,515,455

Hras

HRas proto-oncogene, GTPase

214,178,404

214,181,841

Hsp90aa1

heat shock protein 90 alpha family class A member 1

135,107,262

135,112,793

Ikbkb

inhibitor of nuclear factor kappa B kinase subunit beta

74,177,233

74,230,809

Il10rb

interleukin 10 receptor subunit beta

31,560,301

31,582,457

Il1b

interleukin 1 beta

121,876,256

121,882,637

Il1rn

interleukin 1 receptor antagonist

1,449,778

1,468,624

Il36rn

interleukin 36 receptor antagonist

1,385,256

1,392,275

Il4

interleukin 4

38,963,979

38,969,531

Il6

interleukin 6

3,043,231

3,047,807

Jun

Jun proto-oncogene, AP-1 transcription factor subunit

114,011,184

114,014,277

Klk1

kallikrein 1

100,131,562

100,135,556

Lep

leptin

56,337,695

56,351,818

Lta

lymphotoxin alpha

4,851,889

4,854,677

Map2k6

mitogen-activated protein kinase kinase 6

98,707,160

98,823,054

Map3k14

mitogen-activated protein kinase kinase kinase 14

91,303,428

91,353,601

Map3k7

mitogen activated protein kinase kinase kinase 7

47,183,142

47,244,424

Mapk1

mitogen activated protein kinase 1

88,203,863

88,273,301

Mapk3

mitogen activated protein kinase 3

198,192,773

198,198,975

Mir146a

microRNA 146a

28,962,476

28,962,570

Mmp13

matrix metallopeptidase 13

5,522,739

5,533,018

Mt1

metallothionein 1

11,301,991

11,303,007

metallothionein 2A

11,307,966

11,308,740

Myb

MYB proto-oncogene, transcription factor

16,658,178

16,690,135

nuclear factor, erythroid 2-like 2

62,497,568

62,525,146

Nfkb1

nuclear factor kappa B subunit 1

240,773,520

240,890,053

Nfkbia

NFKB inhibitor alpha

76,267,227

76,270,457

Nos2

nitric oxide synthase 2

66,188,290

66,221,621

NAD(P)H quinone dehydrogenase 1

38,422,210

38,437,103

Pik3r1

phosphoinositide-3-kinase regulatory subunit 1

31,742,326

31,826,882

Pmepa1

prostate transmembrane protein, androgen induced 1

171,295,630

171,342,662

Pon1

paraoxonase 1

30,249,749

30,276,297

prostaglandin-endoperoxide synthase 2

67,351,230

67,356,920

Rela

RELA proto-oncogene, NF-kB subunit

220,992,770

221,003,249

Selplg

selectin P ligand

48,577,905

48,579,196

solute carrier family 11 member 2

142,025,812

142,062,892

solute carrier family 40 member 1

52,819,451

52,830,461

Snca

synuclein alpha

90,782,412

90,883,236

Sod1

superoxide dismutase 1

30,363,282

30,368,858

Sod2

superoxide dismutase 2

47,914,757

47,921,587

Spp1

secreted phosphoprotein 1

6,673,686

6,679,965

Stat1

signal transducer and activator of transcription 1

54,287,540

54,327,958

Stat3

signal transducer and activator of transcription 3

88,790,401

88,842,263

Tas1r3

taste 1 receptor member 3

173,307,325

173,312,950

transferrin

111,694,570

111,721,275

transferrin receptor

71,397,423

71,419,263

Timp1

TIMP metallopeptidase inhibitor 1

1,364,771

1,369,451

Tlr2

toll-like receptor 2

182,840,171

182,846,061

Tlr4

toll-like receptor 4

82,587,424

82,601,056

tumor necrosis factor

5,189,382

5,192,000

Trpm5

transient receptor potential cation channel, subfamily M, member 5

216,256,653

216,281,504

Trpv1

transient receptor potential cation channel, subfamily V, member 1

59,799,123

59,824,208

Xcr1

X-C motif chemokine receptor 1

132,911,474

132,919,110

iron(3+) sulfate

Symbol

Object Name

JBrowse

Chr

Start

Stop

Reference

aconitase 1

56,425,076

56,481,218

Got1

glutamic-oxaloacetic transaminase 1

263,246,248

263,269,762

Gpt

glutamic--pyruvic transaminase

117,759,083

117,761,932

hypoxia inducible factor 1 subunit alpha

96,810,868

96,856,303

iron(III) citrate

Symbol

Object Name

JBrowse

Chr

Start

Stop

Reference

Alb

albumin

19,176,275

19,191,793

Aldob

aldolase, fructose-bisphosphate B

64,805,772

64,818,813

Aqp4

aquaporin 4

6,766,009

6,782,757

Ca9

carbonic anhydrase 9

59,008,277

59,015,535

Ccl2

C-C motif chemokine ligand 2

69,412,065

69,413,863

Cftr

CF transmembrane conductance regulator

42,693,263

42,860,679

Crp

C-reactive protein

91,080,448

91,081,358

Cyp2e1

cytochrome P450, family 2, subfamily e, polypeptide 1

213,511,892

213,522,195

Ddit3

DNA-damage inducible transcript 3

70,578,564

70,585,074

Edn1

endothelin 1

22,136,814

22,143,745

Epo

erythropoietin

22,274,828

22,278,268

F10

coagulation factor X

81,803,169

81,822,476

coagulation factor II

80,529,468

80,542,993

Fth1

ferritin heavy chain 1

226,030,940

226,033,228

ferritin light chain 1

101,448,190

101,450,034

Gclm

glutamate cysteine ligase, modifier subunit

225,827,504

225,847,876

hypoxia inducible factor 1 subunit alpha

96,810,868

96,856,303

heme oxygenase 1

14,508,634

14,515,455

Il1a

interleukin 1 alpha

121,824,712

121,836,122

Keap1

Kelch-like ECH-associated protein 1

22,250,518

22,259,868

Klk1

kallikrein 1

100,131,562

100,135,556

nuclear factor, erythroid 2-like 2

62,497,568

62,525,146

NAD(P)H quinone dehydrogenase 1

38,422,210

38,437,103

prostaglandin-endoperoxide synthase 2

67,351,230

67,356,920

Serpine1

serpin family E member 1

22,641,104

22,651,482

Sqstm1

sequestosome 1

35,704,728

35,716,316

transferrin

111,694,570

111,721,275

transferrin receptor

71,397,423

71,419,263

tumor necrosis factor

5,189,382

5,192,000

Txnrd1

thioredoxin reductase 1

26,946,124

26,984,400

iron(III) nitrilotriacetate

Symbol

Object Name

JBrowse

Chr

Start

Stop

Reference

Abcb1a

ATP binding cassette subfamily B member 1A

22,339,829

22,517,642

Abcc1

ATP binding cassette subfamily C member 1

549,537

672,235

Abcc2

ATP binding cassette subfamily C member 2

263,554,426

263,612,556

Abcc4

ATP binding cassette subfamily C member 4

103,695,415

103,927,980

Anxa2

annexin A2

75,687,134

75,723,589

BCL2 associated X, apoptosis regulator

101,451,801

101,457,207

Bbc3

Bcl-2 binding component 3

78,261,491

78,267,802

Bik

BCL2-interacting killer

124,390,924

124,410,449

Cald1

caldesmon 1

62,103,948

62,291,375

Canx

calnexin

35,800,942

35,833,939

Casp12

caspase 12

2,658,892

2,686,160

caspase 3

48,845,011

48,863,249

Casp8

caspase 8

65,614,142

65,662,624

Casp9

caspase 9

160,356,211

160,373,774

Cat

catalase

93,379,872

93,412,058

Ccnd1

cyclin D1

218,090,750

218,100,447

Cd44

CD44 molecule (Indian blood group)

92,695,083

92,783,820

Cd47

Cd47 molecule

53,511,485

53,575,754

cyclin-dependent kinase inhibitor 1A

6,348,422

6,358,864

Chrm1

cholinergic receptor, muscarinic 1

224,869,087

224,885,101

Chrm2

cholinergic receptor, muscarinic 2

64,089,028

64,091,090

Col1a1

collagen type I alpha 1 chain

82,745,801

82,762,790

Cygb

cytoglobin

105,618,325

105,628,091

Cyp2e1

cytochrome P450, family 2, subfamily e, polypeptide 1

213,511,892

213,522,195

Fos

Fos proto-oncogene, AP-1 transcription factor subunit

109,300,433

109,303,299

Fosl1

FOS like 1, AP-1 transcription factor subunit

220,826,560

220,835,066

G6pd

glucose-6-phosphate dehydrogenase

156,274,800

156,293,935

Gclc

glutamate-cysteine ligase, catalytic subunit

85,059,051

85,097,471

Gsr

glutathione-disulfide reductase

62,197,617

62,239,987

Gtse1

G-2 and S-phase expressed 1

126,736,416

126,753,221

Havcr1

hepatitis A virus cellular receptor 1

31,813,819

31,860,934

hypoxia inducible factor 1 subunit alpha

96,810,868

96,856,303

heme oxygenase 1

14,508,634

14,515,455

Hsp90aa1

heat shock protein 90 alpha family class A member 1

135,107,262

135,112,793

Il24

interleukin 24

47,618,451

47,623,849

Il6

interleukin 6

3,043,231

3,047,807

Jun

Jun proto-oncogene, AP-1 transcription factor subunit

114,011,184

114,014,277

Krt18

keratin 18

143,629,455

143,633,131

Krt8

keratin 8

143,596,511

143,603,745

Mcm3

minichromosome maintenance complex component 3

26,914,057

26,932,201

Mt1

metallothionein 1

11,301,991

11,303,007

metallothionein 2A

11,307,966

11,308,740

Mt3

metallothionein 3

11,324,708

11,326,112

Myc

MYC proto-oncogene, bHLH transcription factor

102,586,313

102,591,240

nuclear factor, erythroid 2-like 2

62,497,568

62,525,146

Nfkb1

nuclear factor kappa B subunit 1

240,773,520

240,890,053

Nos2

nitric oxide synthase 2

66,188,290

66,221,621

NAD(P)H quinone dehydrogenase 1

38,422,210

38,437,103

Odc1

ornithine decarboxylase 1

42,852,529

42,859,142

Pck1

phosphoenolpyruvate carboxykinase 1

171,213,936

171,219,885

Pcna

proliferating cell nuclear antigen

124,880,698

124,884,570

Phlda3

pleckstrin homology-like domain, family A, member 3

52,588,917

52,592,002

Plau

plasminogen activator, urokinase

3,644,296

3,650,765

Plk2

polo-like kinase 2

41,911,143

41,916,901

Pola1

DNA polymerase alpha 1, catalytic subunit

62,382,604

62,698,830

Ppia

peptidylprolyl isomerase A

86,673,775

86,677,443

prostaglandin-endoperoxide synthase 2

67,351,230

67,356,920

Ptprb

protein tyrosine phosphatase, receptor type, B

59,326,484

59,431,114

Ptprz1

protein tyrosine phosphatase, receptor type Z1

49,941,046

50,140,764

Rela

RELA proto-oncogene, NF-kB subunit

220,992,770

221,003,249

Rpl19

ribosomal protein L19

85,978,691

85,981,979

Rprm

reprimo, TP53 dependent G2 arrest mediator homolog

39,595,301

39,596,718

Rps13

ribosomal protein S13

185,328,902

185,331,332

Rps15

ribosomal protein S15

12,282,134

12,283,573

solute carrier family 11 member 2

142,025,812

142,062,892

solute carrier family 40 member 1

52,819,451

52,830,461

Sod1

superoxide dismutase 1

30,363,282

30,368,858

Ssrp1

structure specific recognition protein 1

72,447,516

72,457,621

Tgfa

transforming growth factor alpha

117,961,877

118,045,923

Tgfb1

transforming growth factor, beta 1

82,480,875

82,497,196

Tgfb2

transforming growth factor, beta 2

105,039,639

105,142,010

Timp1

TIMP metallopeptidase inhibitor 1

1,364,771

1,369,451

tumor necrosis factor

5,189,382

5,192,000

Tp53

tumor protein p53

56,186,299

56,198,449

Txn1

thioredoxin 1

75,049,735

75,057,731

Txnip

thioredoxin interacting protein

198,683,168

198,686,971

Ubd

ubiquitin D

1,876,175

1,878,126

nickel ferrite

Symbol

Object Name

JBrowse

Chr

Start

Stop

Reference

BCL2 associated X, apoptosis regulator

101,451,801

101,457,207

Bcl2

BCL2, apoptosis regulator

26,605,426

26,769,374

Birc5

baculoviral IAP repeat-containing 5

106,856,097

106,864,419

caspase 3

48,845,011

48,863,249

Casp9

caspase 9

160,356,211

160,373,774

Tp53

tumor protein p53

56,186,299

56,198,449