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ONTOLOGY REPORT - ANNOTATIONS


Term:glucoraphanin
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Accession:CHEBI:79311 term browser browse the term
Definition:A thia-glucosinolic acid that is glucoerucin in which the sulfur atom of the methyl thioether group has been oxidised to the corresponding sulfoxide.
Synonyms:exact_synonym: 1-S-[(1Z)-5-(methylsulfinyl)-N-(sulfooxy)pentanimidoyl]-1-thio-beta-D-glucopyranose
 related_synonym: 4-Methylsulfinylbutyl glucosinolate;   Formula=C12H23NO10S3;   InChI=1S/C12H23NO10S3/c1-25(18)5-3-2-4-8(13-23-26(19,20)21)24-12-11(17)10(16)9(15)7(6-14)22-12/h7,9-12,14-17H,2-6H2,1H3,(H,19,20,21)/b13-8-/t7-,9-,10+,11-,12+,25?/m1/s1;   InChIKey=GMMLNKINDDUDCF-BYNGITTOSA-N;   SMILES=[C@H]1(O[C@@H]([C@@H](O)[C@@H]([C@H]1O)O)CO)S/C(=N\\OS(O)(=O)=O)/CCCCS(C)=O
 xref: CAS:21414-41-5 "ChemIDplus";   CAS:21414-41-5 "KEGG COMPOUND";   HMDB:HMDB0038404;   KEGG:C08419;   KNApSAcK:C00007545
 xref_mesh: MESH:C119494
 xref: PMID:23110644 "Europe PMC";   PMID:24054222 "Europe PMC";   PMID:24170324 "Europe PMC";   Reaxys:8167699 "Reaxys";   Wikipedia:Glucoraphanin
 cyclic_relationship: is_conjugate_acid_of CHEBI:5415


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glucoraphanin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:6480464
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:6480464
G Gpx2 glutathione peroxidase 2 JBrowse link 6 99,839,960 99,843,245 RGD:6480464
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:6480464
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19734
    chemical entity 19732
      atom 19730
        nonmetal atom 19601
          sulfur atom 16140
            sulfur molecular entity 16140
              organosulfur compound 15032
                sulfoxide 3047
                  glucoraphanin 7
Path 2
Term Annotations click to browse term
  CHEBI ontology 19734
    subatomic particle 19730
      composite particle 19730
        hadron 19730
          baryon 19730
            nucleon 19730
              atomic nucleus 19730
                atom 19730
                  main group element atom 19614
                    p-block element atom 19614
                      carbon group element atom 19506
                        carbon atom 19500
                          organic molecular entity 19500
                            heteroorganic entity 19066
                              organochalcogen compound 18783
                                organooxygen compound 18696
                                  carbohydrates and carbohydrate derivatives 12112
                                    carbohydrate 12112
                                      monosaccharide 3930
                                        aldose 2430
                                          aldohexose 2069
                                            glucose 2029
                                              D-glucose 2029
                                                D-glucopyranose 1609
                                                  beta-D-glucose 1585
                                                    1-thio-beta-D-glucopyranose 14
                                                      beta-D-thioglucoside 14
                                                        desulfoglucosinolic acid 14
                                                          glucosinolic acid 14
                                                            alkylglucosinolic acid 7
                                                              thia-alkylglucosinolic acid 7
                                                                glucoerucin 7
                                                                  glucoraphanin 7
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.