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ONTOLOGY REPORT - ANNOTATIONS


Term:glucoraphanin
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Accession:CHEBI:79311 term browser browse the term
Definition:A thia-glucosinolic acid that is glucoerucin in which the sulfur atom of the methyl thioether group has been oxidised to the corresponding sulfoxide.
Synonyms:exact_synonym: 1-S-[(1Z)-5-(methylsulfinyl)-N-(sulfooxy)pentanimidoyl]-1-thio-beta-D-glucopyranose
 related_synonym: 4-Methylsulfinylbutyl glucosinolate;   Formula=C12H23NO10S3;   InChI=1S/C12H23NO10S3/c1-25(18)5-3-2-4-8(13-23-26(19,20)21)24-12-11(17)10(16)9(15)7(6-14)22-12/h7,9-12,14-17H,2-6H2,1H3,(H,19,20,21)/b13-8-/t7-,9-,10+,11-,12+,25?/m1/s1;   InChIKey=GMMLNKINDDUDCF-BYNGITTOSA-N;   SMILES=[C@H]1(O[C@@H]([C@@H](O)[C@@H]([C@H]1O)O)CO)S/C(=N\\OS(O)(=O)=O)/CCCCS(C)=O
 xref: CAS:21414-41-5 "ChemIDplus";   CAS:21414-41-5 "KEGG COMPOUND";   HMDB:HMDB0038404;   KEGG:C08419;   KNApSAcK:C00007545
 xref_mesh: MESH:C119494
 xref: PMID:23110644 "Europe PMC";   PMID:24054222 "Europe PMC";   PMID:24170324 "Europe PMC";   Reaxys:8167699 "Reaxys";   Wikipedia:Glucoraphanin
 cyclic_relationship: is_conjugate_acid_of CHEBI:5415


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glucoraphanin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:6480464
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:6480464
G Gpx2 glutathione peroxidase 2 JBrowse link 6 99,839,960 99,843,245 RGD:6480464
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:6480464
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    chemical entity 19652
      atom 19650
        nonmetal atom 19516
          sulfur atom 15974
            sulfur molecular entity 15974
              organosulfur compound 14794
                sulfoxide 3045
                  glucoraphanin 7
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            heteroorganic entity 18990
                              organochalcogen compound 18705
                                organooxygen compound 18615
                                  carbohydrates and carbohydrate derivatives 11721
                                    carbohydrate 11721
                                      monosaccharide 3876
                                        aldose 2380
                                          aldohexose 2017
                                            glucose 1977
                                              D-glucose 1977
                                                D-glucopyranose 1605
                                                  beta-D-glucose 1581
                                                    1-thio-beta-D-glucopyranose 14
                                                      beta-D-thioglucoside 14
                                                        desulfoglucosinolic acid 14
                                                          glucosinolic acid 14
                                                            alkylglucosinolic acid 7
                                                              thia-alkylglucosinolic acid 7
                                                                glucoerucin 7
                                                                  glucoraphanin 7
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.