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Term:1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine
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Accession:CHEBI:77890 term browser browse the term
Definition:A 1,2-diacyl-sn-glycero-3-phosphocholine having palmitoyl and 5-oxovaleryl groups at the 1- and 2-positions respectively; major species at pH 7.3.
Synonyms:exact_synonym: (2R)-3-(hexadecanoyloxy)-2-[(5-oxopentanoyl)oxy]propyl 2-(trimethylazaniumyl)ethyl phosphate
 related_synonym: (2R)-2-[(5-oxopentanoyl)oxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate;   1-Palmitoyl-2-(5-oxovaleroyl)-sn-glycero-3-phosphorylcholine;   1-hexadecanoyl-2-(5-oxopentanoyl)-sn-glycero-3-phosphocholine;   1-hexadecanoyl-2-(5-oxopentanoyl)-sn-glycero-3-phosphocholine zwitterion;   1-hexadecanoyl-2-(5-oxovaleroyl)-sn-glycero-3-phosphocholine;   Formula=C29H56NO9P;   InChI=1S/C29H56NO9P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-20-28(32)36-25-27(39-29(33)21-18-19-23-31)26-38-40(34,35)37-24-22-30(2,3)4/h23,27H,5-22,24-26H2,1-4H3/t27-/m1/s1;   InChIKey=RKIDALSACBQVTN-HHHXNRCGSA-N;   PC(16:0/5:0(CHO));   POVPC;   SMILES=CCCCCCCCCCCCCCCC(=O)OC[C@H](COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCC=O
 alt_id: MESH:C400184
 xref: LIPID_MAPS_instance:LMGP20010005 "LIPID MAPS"
 xref_mesh: MESH:C400184
 xref: PMID:16386258 "Europe PMC";   PMID:16904371 "Europe PMC";   PMID:22958747 "Europe PMC";   PMID:23936132 "Europe PMC";   PMID:24079413 "Europe PMC";   PMID:24890951 "Europe PMC";   Reaxys:15471652 "Reaxys"
 cyclic_relationship: is_conjugate_base_of CHEBI:60319


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1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:6480464
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:6480464
G Ccr2 C-C motif chemokine receptor 2 RGD:6480464
G Cd68 Cd68 molecule JBrowse link 10 56,268,726 56,270,605 RGD:6480464
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6480464
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6480464
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Kcnab2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 JBrowse link 5 169,570,327 169,658,875 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Olr1 oxidized low density lipoprotein receptor 1 JBrowse link 4 163,239,853 163,261,937 RGD:6480464
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:6480464
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Sele selectin E JBrowse link 13 82,355,234 82,365,323 RGD:6480464
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:6480464
G Timp4 TIMP metallopeptidase inhibitor 4 JBrowse link 4 147,156,948 147,163,467 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        biochemical role 19138
          apoptosis inducer 10783
            1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine 19
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      chalcogen 19233
                        oxygen atom 19188
                          oxygen molecular entity 19188
                            hydroxides 18965
                              oxoacid 18076
                                pnictogen oxoacid 8534
                                  phosphorus oxoacid 8429
                                    phosphoric acids 7314
                                      phosphoric acid 7314
                                        phosphoric acid derivative 6965
                                          phosphate 6965
                                            organic phosphate 6964
                                              phospholipid 282
                                                glycerophospholipid 191
                                                  glycerophosphocholine 110
                                                    phosphatidylcholine 76
                                                      1,2-diacyl-sn-glycero-3-phosphocholine 22
                                                        1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine 19
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.