Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ginsenoside Rb2
go back to main search page
Accession:CHEBI:77152 term browser browse the term
Definition:A ginsenoside found in Panax ginseng that is dammarane which is substituted by hydroxy groups at the 3beta, 12beta and 20 pro-S positions, in which the hydroxy groups at positions 3 and 20 have been converted to the corresponding beta-D-glucopyranosyl-(1->2)-beta-D-glucopyranoside and alpha-L-arabinopyranosyl-(1->6)-beta-D-glucopyranoside respectively, and in which a double bond has been introduced at the 24-25 position.
Synonyms:exact_synonym: (3beta,12beta)-20-{[6-O-(alpha-L-arabinopyranosyl)-beta-D-glucopyranosyl]oxy}-12-hydroxydammar-24-en-3-yl 2-O-beta-D-glucopyranosyl-beta-D-glucopyranoside
 related_synonym: (20S)-ginsenoside Rb2;   Formula=C53H90O22;   Ginsenoside C;   InChI=1S/C53H90O22/c1-23(2)10-9-14-53(8,75-47-43(67)39(63)37(61)29(72-47)22-69-45-41(65)34(58)26(57)21-68-45)24-11-16-52(7)33(24)25(56)18-31-50(5)15-13-32(49(3,4)30(50)12-17-51(31,52)6)73-48-44(40(64)36(60)28(20-55)71-48)74-46-42(66)38(62)35(59)27(19-54)70-46/h10,24-48,54-67H,9,11-22H2,1-8H3/t24-,25+,26-,27+,28+,29+,30-,31+,32-,33-,34-,35+,36+,37+,38-,39-,40-,41+,42+,43+,44+,45-,46-,47-,48-,50-,51+,52+,53-/m0/s1;   InChIKey=NODILNFGTFIURN-GZPRDHCNSA-N;   NSC 308878;   SMILES=CC(C)=CCC[C@](C)(O[C@@H]1O[C@H](CO[C@@H]2OC[C@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H](O)[C@H]1O)[C@H]1CC[C@]2(C)[C@@H]1[C@H](O)C[C@@H]1[C@@]3(C)CC[C@H](O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4O)C(C)(C)[C@@H]3CC[C@@]21C
 xref: CAS:11021-13-9 "ChemIDplus";   HMDB:HMDB0034996
 xref_mesh: MESH:C048026
 xref: MetaCyc:CPD-15451 "SUBMITTER";   PMID:21811908 "Europe PMC";   PMID:21811928 "Europe PMC";   PMID:22031031 "Europe PMC";   PMID:22534302 "Europe PMC";   PMID:22717707 "Europe PMC";   PMID:23271644 "Europe PMC";   PMID:23670791 "Europe PMC";   PMID:23717160 "Europe PMC";   PMID:24369998 "Europe PMC";   PMID:8798715 "Europe PMC";   Patent:WO2006001654;   Reaxys:4901741 "Reaxys"


show annotations for term's descendants       view all columns           Sort by:
 
ginsenoside Rb2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6480464
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19657
    role 19601
      biological role 19599
        antimicrobial agent 17148
          antiviral agent 3603
            ginsenoside Rb2 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19657
    subatomic particle 19653
      composite particle 19653
        hadron 19653
          baryon 19653
            nucleon 19653
              atomic nucleus 19653
                atom 19653
                  main group element atom 19534
                    p-block element atom 19534
                      carbon group element atom 19417
                        carbon atom 19409
                          organic molecular entity 19409
                            heteroorganic entity 18995
                              organochalcogen compound 18712
                                organooxygen compound 18625
                                  carbohydrates and carbohydrate derivatives 11699
                                    carbohydrate 11699
                                      monosaccharide 3868
                                        aldose 2372
                                          aldohexose 2011
                                            glucose 1969
                                              D-glucose 1969
                                                D-glucopyranose 1593
                                                  beta-D-glucose 1569
                                                    beta-D-glucoside 1373
                                                      ginsenoside Rb2 2
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.