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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:ginsenoside F1
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Accession:CHEBI:77150 term browser browse the term
Definition:A ginsenoside found in Panax species that is dammarane which is substituted by hydroxy groups at the 3beta, 6alpha, 12beta and 20 pro-S positions, in which the hydroxy group at position 20 has been converted to the corresponding beta-D-glucopyranoside, and in which a double bond has been introduced at the 24-25 position.
Synonyms:exact_synonym: (beta,6alpha,12beta)-3,6,12-trihydroxydammar-24-en-20-yl beta-D-glucopyranoside
 related_synonym: (20S)-ginsenoside F1;   Formula=C36H62O9;   InChI=1S/C36H62O9/c1-19(2)10-9-13-36(8,45-31-29(43)28(42)27(41)23(18-37)44-31)20-11-15-34(6)26(20)21(38)16-24-33(5)14-12-25(40)32(3,4)30(33)22(39)17-35(24,34)7/h10,20-31,37-43H,9,11-18H2,1-8H3/t20-,21+,22-,23+,24+,25-,26-,27+,28-,29+,30-,31-,33+,34+,35+,36-/m0/s1;   InChIKey=XNGXWSFSJIQMNC-FIYORUNESA-N;   SMILES=CC(C)=CCC[C@](C)(O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@H]1CC[C@]2(C)[C@@H]1[C@H](O)C[C@@H]1[C@@]3(C)CC[C@H](O)C(C)(C)[C@@H]3[C@@H](O)C[C@@]21C
 xref: CAS:53963-43-2;   HMDB:HMDB0039555
 xref_mesh: MESH:C055327
 xref: MetaCyc:CPD-15448;   PMID:12925222;   PMID:21826401;   PMID:22031031;   PMID:22766417;   Patent:CN1839855;   Patent:CN1839856;   Patent:CN1839857;   Patent:CN1839858;   Patent:CN1839859;   Patent:CN1839860;   Patent:EP1575599;   Patent:EP1727512;   Patent:US2007155829;   Patent:US2008261899;   Patent:US2008280838;   Patent:WO2004058141;   Patent:WO2005092280;   Patent:WO2006001654;   Reaxys:7238473



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ginsenoside F1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il6 interleukin 6 multiple interactions ISO ginsenoside F1 inhibits the reaction [Galactose results in increased secretion of IL6 protein] CTD PMID:29412148 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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G Rela RELA proto-oncogene, NF-kB subunit multiple interactions ISO ginsenoside F1 inhibits the reaction [Galactose affects the localization of RELA protein] CTD PMID:29412148 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link

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Term Annotations click to browse term
  CHEBI ontology 19860
    role 19832
      biological role 19830
        inhibitor 18907
          apoptosis inhibitor 7183
            ginsenoside F1 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19860
    subatomic particle 19858
      composite particle 19858
        hadron 19858
          baryon 19858
            nucleon 19858
              atomic nucleus 19858
                atom 19858
                  main group element atom 19804
                    p-block element atom 19804
                      carbon group element atom 19745
                        carbon atom 19741
                          organic molecular entity 19741
                            heteroorganic entity 19494
                              organochalcogen compound 19257
                                organooxygen compound 19173
                                  carbohydrates and carbohydrate derivatives 15291
                                    carbohydrate 15291
                                      monosaccharide 4811
                                        aldose 3227
                                          aldohexose 2878
                                            glucose 2832
                                              D-glucose 2830
                                                D-glucopyranose 1811
                                                  beta-D-glucose 1661
                                                    beta-D-glucoside 1466
                                                      ginsenoside F1 2
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