Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   


The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at The data is made available under the Creative Commons License (CC BY 3.0, For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

go back to main search page
Accession:CHEBI:76923 term browser browse the term
Definition:A charged berberine alkaloid obtained by N-methylation of (S)-scoulerine.
Synonyms:exact_synonym: (7S,13aS)-2,9-dihydroxy-3,10-dimethoxy-7-methyl-5,8,13,13a-tetrahydro-6H-isoquinolino[3,2-a]isoquinolinium
 related_synonym: (S)-cis-N-methylscoulerine;   (S,S)-N-methylscoulerine;   Cissamine;   Formula=C20H24NO4;   InChI=1S/C20H23NO4/c1-21-7-6-13-9-19(25-3)17(22)10-14(13)16(21)8-12-4-5-18(24-2)20(23)15(12)11-21/h4-5,9-10,16H,6-8,11H2,1-3H3,(H-,22,23)/p+1/t16-,21-/m0/s1;   InChIKey=LKLWVKCEYSPQHL-KKSFZXQISA-O;   SMILES=COc1ccc2C[C@H]3c4cc(O)c(OC)cc4CC[N@@+]3(C)Cc2c1O
 xref: CAS:18556-27-9;   PMID:10726860;   PMID:14236247;   PMID:15802807;   PMID:16640839;   PMID:19624470;   Patent:CN1500486;   Reaxys:1555524;   Wikipedia:Cyclanoline

show annotations for term's descendants           Sort by:

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19781
    chemical entity 19781
      molecular entity 19779
        ion 15942
          organic ion 8462
            organic cation 7320
              quaternary ammonium ion 5109
                cyclanoline 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19781
    subatomic particle 19779
      composite particle 19779
        hadron 19779
          baryon 19779
            nucleon 19779
              atomic nucleus 19779
                atom 19779
                  main group element atom 19669
                    p-block element atom 19669
                      carbon group element atom 19588
                        carbon atom 19578
                          organic molecular entity 19578
                            organic molecule 19510
                              organic cyclic compound 19337
                                organic heterocyclic compound 18550
                                  organonitrogen heterocyclic compound 17522
                                    dibenzoquinolizine 360
                                      berberine alkaloid 360
                                        (S)-scoulerine 0
                                          cyclanoline 0
paths to the root