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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:4-(21-amino-4,9,12-trioxo-16,19-dioxa-5,8,13-triazahenicos-1-yloxy)-malachite green cation
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Accession:CHEBI:76213 term browser browse the term
Definition:An iminium ion consisting of malachite green cation, substituted at the para position of the otherwise unsubstituted phenyl group with a diethylene glycol diamine linker, the terminal amino group of which may form part of a fluorogen activating protein (FAP).
Synonyms:exact_synonym: 4-{[4-(21-amino-4,9,12-trioxo-16,19-dioxa-5,8,13-triazahenicos-1-yloxy)phenyl][4-(dimethylamino)phenyl]methylene}-N,N-dimethylcyclohexa-2,5-dien-1-iminium
 related_synonym: Formula=C39H55N6O6;   InChI=1S/C39H54N6O6/c1-44(2)33-13-7-30(8-14-33)39(31-9-15-34(16-10-31)45(3)4)32-11-17-35(18-12-32)51-25-5-6-36(46)41-22-23-42-37(47)19-20-38(48)43-24-27-50-29-28-49-26-21-40/h7-18H,5-6,19-29,40H2,1-4H3,(H2-,41,42,43,46,47,48)/p+1;   InChIKey=ZPWCOSMKGXFUAS-UHFFFAOYSA-O;   SMILES=CN(C)c1ccc(cc1)C(c1ccc(OCCCC(=O)NCCNC(=O)CCC(=O)NCCOCCOCCN)cc1)=C1C=CC(C=C1)=[N+](C)C
 xref: PDB:4K3H;   PMID:23978698



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Term Annotations click to browse term
  CHEBI ontology 24838
    role 24759
      biological role 24728
        fluorogen 0
          4-(21-amino-4,9,12-trioxo-16,19-dioxa-5,8,13-triazahenicos-1-yloxy)-malachite green cation 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 24838
    subatomic particle 24799
      composite particle 24799
        hadron 24799
          baryon 24799
            nucleon 24799
              atomic nucleus 24799
                atom 24799
                  main group element atom 24668
                    p-block element atom 24668
                      carbon group element atom 24465
                        carbon atom 24429
                          organic molecular entity 24429
                            organic ion 9460
                              organic cation 8268
                                iminium ion 89
                                  malachite green cation 11
                                    4-(21-amino-4,9,12-trioxo-16,19-dioxa-5,8,13-triazahenicos-1-yloxy)-malachite green cation 0
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