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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:thioflavine T
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Accession:CHEBI:76023 term browser browse the term
Definition:An organic chloride salt having 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium as the counterion. It is widely used to visualise and quantify the presence of amyloids, both in vitro and in vivo.
Synonyms:exact_synonym: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium chloride
 related_synonym: 2-(4-(Dimethylamino)phenyl)-3,6-dimethylbenzothiazolium chloride;   C.I. 49005;   C.I. Basic Yellow 1;   Formula=C17H19ClN2S;   InChI=1S/C17H19N2S.ClH/c1-12-5-10-15-16(11-12)20-17(19(15)4)13-6-8-14(9-7-13)18(2)3;/h5-11H,1-4H3;1H/q+1;/p-1;   InChIKey=JADVWWSKYZXRGX-UHFFFAOYSA-M;   SMILES=C=1(C=2C=CC(N(C)C)=CC2)SC=3C=C(C)C=CC3[N+]1C.[Cl-];   ThT;   Thioflavin T;   basic yellow 1
 alt_id: CHEBI:88013
 xref: CAS:2390-54-7
 xref_mesh: MESH:C009462
 xref: PMID:22976818;   PMID:23069995;   PMID:23151310;   PMID:23215453;   PMID:23454128;   PMID:23458420;   PMID:23479447;   PMID:23517370;   PMID:23662608;   PMID:23747341;   PMID:23807235;   PMID:23844566;   PMID:23903702;   PMID:23909872;   PMID:23934820;   PMID:24002823;   PMID:25483916;   PMID:25712665;   PMID:25794693;   PMID:26087242;   Patent:WO2006006172;   Patent:WO2007011834;   Reaxys:3922452;   Wikipedia:Thioflavin_T


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Term Annotations click to browse term
  CHEBI ontology 858
    role 836
      application 473
        dye 3
          histological dye 0
            thioflavine T 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 858
    subatomic particle 843
      composite particle 843
        hadron 843
          baryon 843
            nucleon 843
              atomic nucleus 843
                atom 843
                  main group element atom 831
                    p-block element atom 828
                      halogen 264
                        chlorine atom 225
                          chlorine molecular entity 225
                            elemental chlorine 22
                              monoatomic chlorine 8
                                chloride 8
                                  chloride salt 8
                                    organic chloride salt 1
                                      thioflavine T 0
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