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ONTOLOGY REPORT - ANNOTATIONS


Term:vadimezan
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Accession:CHEBI:75934 term browser browse the term
Definition:A monocarboxylic acid that is acetic acid in which one of the methyl hydrogens is replaced by a 5,6-dimethyl-9-oxoxanthen-4-yl group.
Synonyms:exact_synonym: (5,6-dimethyl-9-oxo-9H-xanthen-4-yl)acetic acid
 related_synonym: (5,6-dimethyl-9-oxoxanthen-4-yl)acetic acid;   5,6-Dimethyl-9-oxo-9H-xanthene-4-acetic acid;   5,6-Dimethylxanthenone-4-acetic acid;   5,6-Dimethylxanthenoneacetic acid;   5,6-MeXAA;   AS 1404;   Dimethyloxoxanthene acetic acid;   Formula=C17H14O4;   InChI=1S/C17H14O4/c1-9-6-7-13-15(20)12-5-3-4-11(8-14(18)19)17(12)21-16(13)10(9)2/h3-7H,8H2,1-2H3,(H,18,19);   InChIKey=XGOYIMQSIKSOBS-UHFFFAOYSA-N;   NSC 640488;   SMILES=Cc1ccc2c(oc3c(CC(O)=O)cccc3c2=O)c1C;   vadimezanum
 xref: CAS:117570-53-3 "ChemIDplus"
 xref_mesh: MESH:C066668
 xref: PDBeChem:1YE "SUBMITTER";   PMID:20050824 "Europe PMC";   PMID:20072732 "Europe PMC";   PMID:20118240 "Europe PMC";   PMID:20460477 "Europe PMC";   PMID:21205086 "Europe PMC";   PMID:21321262 "Europe PMC";   PMID:21575001 "Europe PMC";   PMID:21588382 "Europe PMC";   PMID:21680264 "Europe PMC";   PMID:21709202 "Europe PMC";   PMID:21819972 "Europe PMC";   PMID:21870897 "Europe PMC";   PMID:22142330 "Europe PMC";   PMID:22695475 "Europe PMC";   PMID:23481183 "Europe PMC";   PMID:23481185 "Europe PMC";   Patent:NZ576925;   Reaxys:4262852 "Reaxys";   Wikipedia:Vadimezan


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vadimezan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link 10 549,537 672,235 RGD:6480464
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      application 19235
        pharmaceutical 19097
          drug 19097
            antineoplastic agent 16555
              vadimezan 7
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            organic group 18343
                              organic divalent group 18334
                                organodiyl group 18334
                                  carbonyl group 18222
                                    carbonyl compound 18222
                                      ketone 15789
                                        cyclic ketone 13094
                                          xanthones 158
                                            vadimezan 7
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.