Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Community Projects Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:tetrazolium violet
go back to main search page
Accession:CHEBI:75193 term browser browse the term
Definition:An organic chloride salt having tetrazolium violet(1+) as the counterion.
Synonyms:exact_synonym: 3-(1-naphthyl)-2,5-diphenyl-2H-tetrazol-3-ium chloride
 related_synonym: 2,5-Diphenyl-3(1-naphthyl)-2H-tetrazolium chloride;   Formula=C23H17ClN4;   InChI=1S/C23H17N4.ClH/c1-3-11-19(12-4-1)23-24-26(20-14-5-2-6-15-20)27(25-23)22-17-9-13-18-10-7-8-16-21(18)22;/h1-17H;1H/q+1;/p-1;   InChIKey=RONADMZTCCPLEF-UHFFFAOYSA-M;   SMILES=[Cl-].c1ccc(cc1)-c1nn(-c2ccccc2)[n+](n1)-c1cccc2ccccc12;   TV;   Tetrazolium purple
 xref: CAS:1719-71-7
 xref_mesh: MESH:C531352
 xref: PMID:10960617;   PMID:14562908;   PMID:16233537;   PMID:16314959;   PMID:16349397;   PMID:18547555;   PMID:18965691;   PMID:19407976;   PMID:19520722;   PMID:22365238;   PMID:23134805;   PMID:23390902;   Patent:EP1294922;   Patent:EP1520882;   Patent:US6376525;   Patent:WO0182780;   Reaxys:14391576


show annotations for term's descendants           Sort by:
tetrazolium violet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 increases activity ISO tetrazolium violet results in increased activity of CASP3 protein CTD PMID:18547555 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Casp8 caspase 8 increases activity ISO tetrazolium violet results in increased activity of CASP8 protein CTD PMID:18547555 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542 		JBrowse link
G Fas Fas cell surface death receptor increases expression ISO tetrazolium violet results in increased expression of FAS protein CTD PMID:18547555 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Faslg Fas ligand increases expression ISO tetrazolium violet results in increased expression of FASL protein CTD PMID:18547555 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215 		JBrowse link
G Tp53 tumor protein p53 increases expression ISO tetrazolium violet results in increased expression of TRP53 protein CTD PMID:18547555 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19900
    role 19875
      application 19710
        dye 2966
          tetrazolium violet 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 19900
    subatomic particle 19898
      composite particle 19898
        hadron 19898
          baryon 19898
            nucleon 19898
              atomic nucleus 19898
                atom 19898
                  main group element atom 19845
                    p-block element atom 19845
                      halogen 18683
                        chlorine atom 18496
                          chlorine molecular entity 18496
                            elemental chlorine 8533
                              monoatomic chlorine 8518
                                chloride 8518
                                  chloride salt 8518
                                    organic chloride salt 1074
                                      tetrazolium violet 5
paths to the root