Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:raffinose family oligosaccharide
go back to main search page
Accession:CHEBI:74961 term browser browse the term
Definition:Any oligosaccharide that has a biosynthetic pathway in common with that of raffinose.
Synonyms:related_synonym: raffinose family oligosaccharides
 xref: PMID:23621405 "Europe PMC";   PMID:23727589 "Europe PMC";   PMID:23879777 "Europe PMC";   PMID:23882273 "Europe PMC"


show annotations for term's descendants       view all columns           Sort by:
 
raffinose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acaca acetyl-CoA carboxylase alpha JBrowse link 10 71,519,392 71,719,910 RGD:6480464
G Acox1 acyl-CoA oxidase 1 JBrowse link 10 104,724,534 104,748,003 RGD:6480464
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:6480464
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:6480464
G Fasn fatty acid synthase JBrowse link 10 109,987,735 110,005,901 RGD:6480464
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:6480464
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:6480464
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:6480464
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:6480464
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19748
    chemical entity 19746
      atom 19744
        nonmetal atom 19616
          oxygen atom 19298
            oxygen molecular entity 19298
              organooxygen compound 18707
                carbohydrates and carbohydrate derivatives 12113
                  carbohydrate 12113
                    oligosaccharide 437
                      raffinose family oligosaccharide 10
                        ajugose 0
                        raffinose + 10
                        stachyose + 0
                        verbascose + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19748
    subatomic particle 19744
      composite particle 19744
        hadron 19744
          baryon 19744
            nucleon 19744
              atomic nucleus 19744
                atom 19744
                  main group element atom 19628
                    p-block element atom 19628
                      carbon group element atom 19522
                        carbon atom 19516
                          organic molecular entity 19516
                            heteroorganic entity 19080
                              organochalcogen compound 18795
                                organooxygen compound 18707
                                  carbohydrates and carbohydrate derivatives 12113
                                    carbohydrate 12113
                                      oligosaccharide 437
                                        raffinose family oligosaccharide 10
                                          ajugose 0
                                          raffinose + 10
                                          stachyose + 0
                                          verbascose + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.