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ONTOLOGY REPORT - ANNOTATIONS


Term:neamine
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Accession:CHEBI:7489 term browser browse the term
Definition:2-Deoxy-D-streptamine glycosylated at the 4-oxygen with a 6-amino-alpha-D-glucosaminyl group.
Synonyms:related_synonym: (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside;   2-desoxy-4-O-(2,6-diamino-2,6-didesoxy-alpha-D-glucopyranosyl)-D-streptamin;   4-O-(2,6-diamino-2,6-dideoxy-alpha-D-glucopyranosyl)-2-deoxy-D-streptamine;   Formula=C12H26N4O6;   InChI=1S/C12H26N4O6/c13-2-5-8(18)9(19)6(16)12(21-5)22-11-4(15)1-3(14)7(17)10(11)20/h3-12,17-20H,1-2,13-16H2/t3-,4+,5-,6-,7+,8-,9-,10-,11-,12-/m1/s1;   InChIKey=SYJXFKPQNSDJLI-HKEUSBCWSA-N;   Neomycin A;   SMILES=NC[C@H]1O[C@H](O[C@@H]2[C@@H](N)C[C@@H](N)[C@H](O)[C@H]2O)[C@H](N)[C@@H](O)[C@@H]1O
 alt_id: CHEBI:46591;   CHEBI:481318
 xref: CAS:3947-65-7 "ChemIDplus";   CAS:3947-65-7 "KEGG COMPOUND";   DrugBank:DB04808;   KEGG:C01441;   PDBeChem:XXX;   PMID:1008820 "Europe PMC";   PMID:16361562 "Europe PMC";   PMID:16870442 "ChEMBL";   PMID:16942021 "ChEMBL";   PMID:17317190 "ChEMBL";   PMID:17416529 "ChEMBL";   PMID:19276260 "Europe PMC";   PMID:20000576 "Europe PMC";   PMID:21135992 "Europe PMC";   Reaxys:26714 "Reaxys"
 cyclic_relationship: is_conjugate_base_of CHEBI:65076


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neomycin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb11 ATP binding cassette subfamily B member 11 JBrowse link 3 55,480,024 55,587,946 RGD:6480464
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6480464
G Abcc3 ATP binding cassette subfamily C member 3 JBrowse link 10 82,047,308 82,116,928 RGD:6480464
G Acat2 acetyl-CoA acetyltransferase 2 JBrowse link 1 47,972,399 47,992,654 RGD:6480464
G Acat2l1 acetyl-CoA acetyltransferase 2-like 1 JBrowse link 1 48,008,574 48,025,730 RGD:6480464
G Ace2 angiotensin I converting enzyme 2 JBrowse link X 32,050,734 32,095,860 RGD:6480464
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:6480464
G Ahsg alpha-2-HS-glycoprotein JBrowse link 11 81,711,269 81,717,594 RGD:6480464
G Aldoa aldolase, fructose-bisphosphate A JBrowse link 1 198,228,387 198,233,988 RGD:6480464
G Aldob aldolase, fructose-bisphosphate B JBrowse link 5 64,805,772 64,818,813 RGD:6480464
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:6480464
G Arg2 arginase 2 JBrowse link 6 102,311,097 102,338,406 RGD:6480464
G Arpc3 actin related protein 2/3 complex, subunit 3 JBrowse link 12 39,653,951 39,667,817 RGD:6480464
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:6480464
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 2 204,003,742 204,032,023 RGD:6480464
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 JBrowse link 10 59,528,849 59,560,440 RGD:6480464
G Atp5mf ATP synthase membrane subunit f JBrowse link 12 11,191,799 11,198,369 RGD:6480464
G Atp5pd ATP synthase peripheral stalk subunit d JBrowse link 10 103,967,340 103,972,552 RGD:6480464
G Atp5pf ATP synthase peripheral stalk subunit F6 JBrowse link 11 24,286,806 24,294,419 RGD:6480464
G B3galt5 Beta-1,3-galactosyltransferase 5 JBrowse link 11 36,638,067 36,683,915 RGD:6480464
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:6480464
G Bcat1 branched chain amino acid transaminase 1 JBrowse link 4 179,259,305 179,340,021 RGD:6480464
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:6480464
G Casr calcium-sensing receptor JBrowse link 11 67,188,204 67,262,261 RGD:6480464
G Ccng2 cyclin G2 JBrowse link 14 16,267,572 16,276,068 RGD:6480464
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:6480464
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:6480464
G Clca4 chloride channel accessory 4 JBrowse link 2 250,842,939 250,864,060 RGD:6480464
G Cldn7 claudin 7 JBrowse link 10 56,576,326 56,578,632 RGD:6480464
G Cmbl carboxymethylenebutenolidase homolog JBrowse link 2 84,645,084 84,666,836 RGD:6480464
G Cndp2 carnosine dipeptidase 2 JBrowse link 18 81,521,966 81,539,065 RGD:6480464
G Cox5a cytochrome c oxidase subunit 5A JBrowse link 8 62,298,358 62,309,765 RGD:6480464
G Cox6b1 cytochrome c oxidase subunit 6B1 JBrowse link 1 89,075,987 89,084,834 RGD:6480464
G Cox7a2 cytochrome c oxidase subunit 7A2 JBrowse link 8 87,209,529 87,213,627 RGD:6480464
G Cth cystathionine gamma-lyase JBrowse link 2 264,266,959 264,293,040 RGD:6480464
G Ctsa cathepsin A JBrowse link 3 161,298,750 161,304,627 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Cyp2c11 cytochrome P450, subfamily 2, polypeptide 11 JBrowse link 1 257,676,172 258,004,428 RGD:6480464
G Cyp2d2 cytochrome P450, family 2, subfamily d, polypeptide 2 JBrowse link 7 123,651,827 123,655,896 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:6480464
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 JBrowse link 12 11,641,500 11,677,818 RGD:6480464
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 JBrowse link 8 130,548,418 130,550,388 RGD:6480464
G Epcam epithelial cell adhesion molecule JBrowse link 6 11,282,194 11,308,870 RGD:6480464
G Etfa electron transfer flavoprotein subunit alpha JBrowse link 8 60,028,786 60,086,352 RGD:6480464
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:6480464
G Fgf19 fibroblast growth factor 19 JBrowse link 1 218,058,405 218,061,693 RGD:6480464
G Foxo1 forkhead box O1 JBrowse link 2 141,451,234 141,527,016 RGD:6480464
G Gadd45g growth arrest and DNA-damage-inducible, gamma JBrowse link 17 13,391,474 13,393,219 RGD:6480464
G Gfpt2 glutamine-fructose-6-phosphate transaminase 2 JBrowse link 10 35,279,237 35,325,506 RGD:6480464
G Gipc2 GIPC PDZ domain containing family, member 2 JBrowse link 2 257,293,161 257,377,982 RGD:6480464
G Gng12 G protein subunit gamma 12 JBrowse link 4 97,634,925 97,763,478 RGD:6480464
G Gpt2 glutamic--pyruvic transaminase 2 JBrowse link 19 22,599,003 22,633,529 RGD:6480464
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:6480464
G Gsta3 glutathione S-transferase alpha 3 JBrowse link 9 27,357,490 27,417,023 RGD:6480464
G Gstm2 glutathione S-transferase mu 2 JBrowse link 2 210,778,041 210,782,807 RGD:6480464
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:6480464
G Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 JBrowse link X 105,417,603 105,423,531 RGD:6480464
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:6480464
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:6480464
G Inhba inhibin subunit beta A JBrowse link 17 51,894,869 51,919,998 RGD:6480464
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:6480464
G Irs2 insulin receptor substrate 2 JBrowse link 16 83,824,515 83,848,569 RGD:6480464
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:6480464
G Klf2 Kruppel-like factor 2 JBrowse link 16 19,223,087 19,225,037 RGD:6480464
G Kng2 kininogen 2 JBrowse link 11 81,509,185 81,516,759 RGD:6480464
G Krt16 keratin 16 JBrowse link 10 88,149,210 88,152,167 RGD:6480464
G Lyz2 lysozyme 2 JBrowse link 7 60,335,968 60,341,264 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase JBrowse link 4 115,004,433 115,015,965 RGD:6480464
G Myh14 myosin heavy chain 14 JBrowse link 1 100,608,975 100,671,086 RGD:6480464
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link 16 21,275,311 21,282,246 RGD:6480464
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 JBrowse link 1 192,044,209 192,057,644 RGD:6480464
G Nog noggin JBrowse link 10 76,811,759 76,813,386 RGD:6480464
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 JBrowse link 14 86,345,946 86,560,694 RGD:6480464
G Npc2 NPC intracellular cholesterol transporter 2 JBrowse link 6 108,467,410 108,488,330 RGD:6480464
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 JBrowse link 13 53,750,470 53,870,288 RGD:6480464
G Pdxk pyridoxal kinase JBrowse link 20 10,930,651 10,952,194 RGD:6480464
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:6480464
G Pgam1 phosphoglycerate mutase 1 JBrowse link 1 261,158,204 261,165,814 RGD:6480464
G Pmm2 phosphomannomutase 2 JBrowse link 10 7,056,258 7,077,443 RGD:6480464
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:6480464
G Ppp1cb protein phosphatase 1 catalytic subunit beta JBrowse link 6 23,548,507 23,581,136 RGD:6480464
G Ppp1cc protein phosphatase 1 catalytic subunit gamma JBrowse link 12 39,864,302 39,882,030 RGD:6480464
G Psat1 phosphoserine aminotransferase 1 JBrowse link 1 233,124,089 233,145,941 RGD:6480464
G Psma3 proteasome 20S subunit alpha 3 JBrowse link 6 93,423,029 93,444,223 RGD:6480464
G Psph phosphoserine phosphatase JBrowse link 12 30,514,128 30,526,551 RGD:6480464
G Ralb RAS like proto-oncogene B JBrowse link 13 35,494,716 35,531,503 RGD:6480464
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:6480464
G Rida reactive intermediate imine deaminase A homolog JBrowse link 7 73,256,506 73,270,308 RGD:6480464
G Rpl30 ribosomal protein L30 JBrowse link 7 73,213,538 73,216,431 RGD:6480464
G Rpn2 ribophorin II JBrowse link 3 153,398,373 153,445,633 RGD:6480464
G Rps23 ribosomal protein S23 JBrowse link 2 19,823,234 19,824,804 RGD:6480464
G Rps27l ribosomal protein S27-like JBrowse link 8 72,741,155 72,746,090 RGD:6480464
G Rps6kb1 ribosomal protein S6 kinase B1 JBrowse link 10 73,824,200 73,865,503 RGD:6480464
G RT1-DMb RT1 class II, locus DMb JBrowse link 20 3,945,383 3,952,838 RGD:6480464
G S100a10 S100 calcium binding protein A10 JBrowse link 2 193,892,589 193,901,236 RGD:6480464
G S100a11 S100 calcium binding protein A11 JBrowse link 2 193,863,185 193,868,646 RGD:6480464
G Scarb2 scavenger receptor class B, member 2 JBrowse link 14 17,064,173 17,115,620 RGD:6480464
G Serpinb6a serpin family B member 6A JBrowse link 17 32,154,747 32,209,598 RGD:6480464
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:6480464
G Slc10a1 solute carrier family 10 member 1 JBrowse link 6 104,617,730 104,631,355 RGD:6480464
G Slc3a1 solute carrier family 3 member 1 JBrowse link 6 8,284,937 8,318,649 RGD:6480464
G Slc51b solute carrier family 51, beta subunit JBrowse link 8 70,930,196 70,938,559 RGD:6480464
G Slco1b2 solute carrier organic anion transporter family member 1B2 JBrowse link 4 175,814,118 175,881,775 RGD:6480464
G Smad6 SMAD family member 6 JBrowse link 8 68,897,746 68,967,221 RGD:6480464
G Smad9 SMAD family member 9 JBrowse link 2 143,951,725 144,002,025 RGD:6480464
G Smpd2 sphingomyelin phosphodiesterase 2 JBrowse link 20 46,212,070 46,215,183 RGD:6480464
G Tars1 threonyl-tRNA synthetase 1 JBrowse link 2 61,394,632 61,414,115 RGD:6480464
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:6480464
G Tm9sf2 transmembrane 9 superfamily member 2 JBrowse link 15 108,526,341 108,579,268 RGD:6480464
G Tmed10 transmembrane p24 trafficking protein 10 JBrowse link 6 109,169,739 109,205,004 RGD:6480464
G Tubal3 tubulin, alpha-like 3 JBrowse link 17 69,974,272 69,982,957 RGD:6480464
G Twf1 twinfilin actin-binding protein 1 JBrowse link 7 135,838,647 135,850,542 RGD:6480464
G Txndc5 thioredoxin domain containing 5 JBrowse link 17 26,925,828 26,953,981 RGD:6480464
G Uqcrc1 ubiquinol-cytochrome c reductase core protein 1 JBrowse link 8 117,679,328 117,691,073 RGD:6480464
G Uqcrfs1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 JBrowse link 17 35,677,984 35,682,262 RGD:6480464
G Uqcrh ubiquinol-cytochrome c reductase hinge protein JBrowse link 5 134,919,040 134,927,235 RGD:6480464
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    role 19598
      biological role 19596
        antimicrobial agent 17143
          antibacterial agent 12897
            neamine 43
              6'''-oxoneomycin C 0
              butirosin A 0
              butirosin B 0
              gamma-L-glutamylbutirosin B 0
              neamine sulfate + 0
              neomycin 43
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            heteroorganic entity 18990
                              organochalcogen compound 18705
                                organooxygen compound 18615
                                  carbohydrates and carbohydrate derivatives 11721
                                    carbohydrate 11721
                                      carbohydrate derivative 11336
                                        glycosyl compound 10287
                                          glycoside 9103
                                            hexoside 1423
                                              glucoside 1408
                                                D-glucoside 1408
                                                  alpha-D-glucoside 47
                                                    2,6-dideoxy-alpha-D-glucoside 43
                                                      neamine 43
                                                        6'''-oxoneomycin C 0
                                                        butirosin A 0
                                                        butirosin B 0
                                                        gamma-L-glutamylbutirosin B 0
                                                        neamine sulfate + 0
                                                        neomycin 43
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.