Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:1-stearoyl-sn-glycero-3-phosphocholine
go back to main search page
Accession:CHEBI:73858 term browser browse the term
Definition:A lysophosphatidylcholine 18:0 in which the acyl substituent is located at position 1 and is specified as stearoyl.
Synonyms:exact_synonym: (2R)-2-hydroxy-3-(octadecanoyloxy)propyl 2-(trimethylazaniumyl)ethyl phosphate
 related_synonym: (2R)-2-hydroxy-3-(stearoyloxy)propyl 2-(trimethylazaniumyl)ethyl phosphate;   1-O-Stearoyl-sn-glycero-3-phosphocholine;   1-Stearoyl-glycero-3-phosphocholine;   1-octadecanoyl-sn-glycero-3-phosphocholine;   1-stearoylglycerophosphocholine(18:0);   18:0 LYSO-PC;   Formula=C26H54NO7P;   GPCho 18:0/0:0;   InChI=1S/C26H54NO7P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-26(29)32-23-25(28)24-34-35(30,31)33-22-21-27(2,3)4/h25,28H,5-24H2,1-4H3/t25-/m1/s1;   InChIKey=IHNKQIMGVNPMTC-RUZDIDTESA-N;   LPC 18:0/0:0;   LPC(18:0);   LysoPC 18:0/0:0;   LysoPC(18:0);   Lysophosphatidylcholine(18:0);   Lysophosphatidylcholine(18:0/0:0);   PC 18:0/0:0;   SMILES=CCCCCCCCCCCCCCCCCC(=O)OC[C@@H](O)COP([O-])(=O)OCC[N+](C)(C)C
 alt_id: CHEBI:74964
 xref: CAS:5655-17-4;   HMDB:HMDB0010384;   LIPID_MAPS_instance:LMGP01050026
 xref_mesh: MESH:C026564
 xref: PMID:20060459;   PMID:22952663;   PMID:23729004;   PMID:28667014;   Reaxys:4215476



show annotations for term's descendants           Sort by:
 
1-stearoyl-sn-glycero-3-phosphocholine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipc lipase C, hepatic type multiple interactions ISO [LIPC gene mutant form co-treated with LIPG gene mutant form] results in increased abundance of stearoyl alpha-lysolecithin CTD PMID:24777581 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Lipg lipase G, endothelial type multiple interactions ISO [LIPC gene mutant form co-treated with LIPG gene mutant form] results in increased abundance of stearoyl alpha-lysolecithin CTD PMID:24777581 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20059
    role 20009
      biological role 20008
        biochemical role 19630
          apoptosis inducer 13409
            1-stearoyl-sn-glycero-3-phosphocholine 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 20059
    subatomic particle 20056
      composite particle 20056
        hadron 20056
          baryon 20056
            nucleon 20056
              atomic nucleus 20056
                atom 20056
                  main group element atom 19956
                    p-block element atom 19956
                      chalcogen 19683
                        oxygen atom 19655
                          oxygen molecular entity 19655
                            hydroxides 19380
                              oxoacid 18684
                                pnictogen oxoacid 10746
                                  phosphorus oxoacid 9740
                                    phosphoric acids 8548
                                      phosphoric acid 8548
                                        phosphoric acid derivative 8250
                                          phosphate 8250
                                            organic phosphate 8249
                                              phospholipid 305
                                                glycerophospholipid 204
                                                  glycerophosphocholine 119
                                                    lysophosphatidylcholine 27
                                                      2-lysophosphatidylcholine 4
                                                        1-O-acyl-sn-glycero-3-phosphocholine 4
                                                          1-stearoyl-sn-glycero-3-phosphocholine 2
paths to the root